Protein–RNA interactions for Protein: Q07540

YFH1, Frataxin homolog, mitochondrial, yeastyeast

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YFH1Q07540 NSR1YGR159C 1245 nt17■□□□□ 0.31
YFH1Q07540 YML009W-BYML009W-B 477 nt16.76■□□□□ 0.27
YFH1Q07540 NOP1YDL014W 984 nt16.3■□□□□ 0.2
YFH1Q07540 MDJ1YFL016C 1536 nt15.21■□□□□ 0.03
YFH1Q07540 YKL036CYKL036C 393 nt14.76□□□□□ -0.05
YFH1Q07540 SRX1YKL086W 384 nt14.22□□□□□ -0.13
YFH1Q07540 Q0297Q0297 156 nt14.19□□□□□ -0.14
YFH1Q07540 YJL027CYJL027C 417 nt14.08□□□□□ -0.16
YFH1Q07540 DBP2YNL112W 1641 nt13.41□□□□□ -0.26
YFH1Q07540 YCR051WYCR051W 669 nt13.39□□□□□ -0.27
YFH1Q07540 SCS3YGL126W 1143 nt13.26□□□□□ -0.29
YFH1Q07540 YBR190WYBR190W 312 nt13.15□□□□□ -0.3
YFH1Q07540 TRN1tP(UGG)A 72 nt13□□□□□ -0.33
YFH1Q07540 SUF9tP(UGG)F 72 nt13□□□□□ -0.33
YFH1Q07540 SUF8tP(UGG)H 72 nt13□□□□□ -0.33
YFH1Q07540 tP(UGG)LtP(UGG)L 72 nt13□□□□□ -0.33
YFH1Q07540 SUF7tP(UGG)M 72 nt13□□□□□ -0.33
YFH1Q07540 tP(UGG)N1tP(UGG)N1 72 nt13□□□□□ -0.33
YFH1Q07540 tP(UGG)N2tP(UGG)N2 72 nt13□□□□□ -0.33
YFH1Q07540 tP(UGG)O1tP(UGG)O1 72 nt13□□□□□ -0.33
YFH1Q07540 SUF11tP(UGG)O2 72 nt13□□□□□ -0.33
YFH1Q07540 YOL085CYOL085C 342 nt12.77□□□□□ -0.37
YFH1Q07540 CCC1YLR220W 969 nt12.76□□□□□ -0.37
YFH1Q07540 RTC3YHR087W 336 nt12.74□□□□□ -0.37
YFH1Q07540 RPP1BYDL130W 321 nt12.7□□□□□ -0.38
YFH1Q07540 RVS167YDR388W 1449 nt12.59□□□□□ -0.39
YFH1Q07540 PKP1YIL042C 1185 nt12.51□□□□□ -0.41
YFH1Q07540 SCJ1YMR214W 1134 nt12.4□□□□□ -0.42
YFH1Q07540 tP(UGG)O3tP(UGG)O3 72 nt12.19□□□□□ -0.46
YFH1Q07540 PUT4YOR348C 1884 nt12.11□□□□□ -0.47
YFH1Q07540 PET122YER153C 765 nt12.11□□□□□ -0.47
YFH1Q07540 SHR5YOL110W 714 nt12.09□□□□□ -0.47
YFH1Q07540 Q0182Q0182 405 nt11.97□□□□□ -0.49
YFH1Q07540 SCR1SCR1 522 nt11.96□□□□□ -0.49
YFH1Q07540 SSA3YBL075C 1950 nt11.92□□□□□ -0.5
YFH1Q07540 URN1YPR152C 1398 nt11.86□□□□□ -0.51
YFH1Q07540 YDJ1YNL064C 1230 nt11.85□□□□□ -0.51
YFH1Q07540 ATS1YAL020C 1002 nt11.81□□□□□ -0.52
YFH1Q07540 ARE1YCR048W 1833 nt11.8□□□□□ -0.52
YFH1Q07540 OPI9YLR338W 858 nt11.79□□□□□ -0.52
YFH1Q07540 RRN5YLR141W 1092 nt11.73□□□□□ -0.53
YFH1Q07540 SAH1YER043C 1350 nt11.71□□□□□ -0.53
YFH1Q07540 DEP1YAL013W 1218 nt11.71□□□□□ -0.53
YFH1Q07540 RPN10YHR200W 807 nt11.69□□□□□ -0.54
YFH1Q07540 POA1YBR022W 534 nt11.65□□□□□ -0.54
YFH1Q07540 YNL208WYNL208W 600 nt11.62□□□□□ -0.55
YFH1Q07540 YHR049C-AYHR049C-A 297 nt11.61□□□□□ -0.55
YFH1Q07540 YER088W-BYER088W-B 147 nt11.52□□□□□ -0.57
YFH1Q07540 GAR1YHR089C 618 nt11.52□□□□□ -0.57
YFH1Q07540 BSC6YOL137W 1494 nt11.47□□□□□ -0.57
YFH1Q07540 PUN1YLR414C 792 nt11.46□□□□□ -0.57
YFH1Q07540 RSB1YOR049C 1065 nt11.4□□□□□ -0.58
YFH1Q07540 YJR018WYJR018W 363 nt11.31□□□□□ -0.6
YFH1Q07540 PTC2YER089C 1395 nt11.29□□□□□ -0.6
YFH1Q07540 BUD23YCR047C 828 nt11.28□□□□□ -0.6
YFH1Q07540 NAB2YGL122C 1578 nt11.24□□□□□ -0.61
YFH1Q07540 SPT5YML010W 3192 nt11.23□□□□□ -0.61
YFH1Q07540 MOT3YMR070W 1473 nt11.22□□□□□ -0.61
YFH1Q07540 TIR1YER011W 765 nt11.19□□□□□ -0.62
YFH1Q07540 SSA1YAL005C 1929 nt11.09□□□□□ -0.63
YFH1Q07540 YJR120WYJR120W 351 nt11.07□□□□□ -0.64
YFH1Q07540 RPP2BYDR382W 333 nt11.04□□□□□ -0.64
YFH1Q07540 FIS1YIL065C 468 nt11.04□□□□□ -0.64
YFH1Q07540 DAL1YIR027C 1383 nt11.03□□□□□ -0.64
YFH1Q07540 PST2YDR032C 597 nt11□□□□□ -0.65
YFH1Q07540 INM2YDR287W 879 nt11□□□□□ -0.65
YFH1Q07540 PHO4YFR034C 939 nt10.91□□□□□ -0.66
YFH1Q07540 FPR4YLR449W 1179 nt10.9□□□□□ -0.66
YFH1Q07540 SSA4YER103W 1929 nt10.88□□□□□ -0.67
YFH1Q07540 MEP2YNL142W 1500 nt10.83□□□□□ -0.68
YFH1Q07540 YPS1YLR120C 1710 nt10.81□□□□□ -0.68
YFH1Q07540 SRB2YHR041C 633 nt10.8□□□□□ -0.68
YFH1Q07540 YBL100CYBL100C 315 nt10.8□□□□□ -0.68
YFH1Q07540 BDH2YAL061W 1254 nt10.78□□□□□ -0.68
YFH1Q07540 YDR095CYDR095C 411 nt10.71□□□□□ -0.69
YFH1Q07540 FUN26YAL022C 1554 nt10.66□□□□□ -0.7
YFH1Q07540 YHR165W-AYHR165W-A 312 nt10.66□□□□□ -0.7
YFH1Q07540 LSM3YLR438C-A 270 nt10.64□□□□□ -0.71
YFH1Q07540 WWM1YFL010C 636 nt10.62□□□□□ -0.71
YFH1Q07540 TRM9YML014W 840 nt10.61□□□□□ -0.71
YFH1Q07540 DCW1YKL046C 1350 nt10.58□□□□□ -0.72
YFH1Q07540 YGR021WYGR021W 873 nt10.58□□□□□ -0.72
YFH1Q07540 SHU1YHL006C 453 nt10.56□□□□□ -0.72
YFH1Q07540 CCT6YDR188W 1641 nt10.55□□□□□ -0.72
YFH1Q07540 ALF1YNL148C 765 nt10.55□□□□□ -0.72
YFH1Q07540 YJL225CYJL225C 5277 nt10.54□□□□□ -0.72
YFH1Q07540 YFL021C-AYFL021C-A 855 nt10.53□□□□□ -0.72
YFH1Q07540 BDF1YLR399C 2061 nt10.51□□□□□ -0.73
YFH1Q07540 RPP2AYOL039W 321 nt10.5□□□□□ -0.73
YFH1Q07540 EMI2YDR516C 1503 nt10.49□□□□□ -0.73
YFH1Q07540 SUF2tP(AGG)C 72 nt10.49□□□□□ -0.73
YFH1Q07540 SUF10tP(AGG)N 72 nt10.49□□□□□ -0.73
YFH1Q07540 HOM6YJR139C 1080 nt10.49□□□□□ -0.73
YFH1Q07540 YMR090WYMR090W 684 nt10.49□□□□□ -0.73
YFH1Q07540 PTP1YDL230W 1008 nt10.47□□□□□ -0.73
YFH1Q07540 RDN37-1RDN37-1 5354 nt10.47□□□□□ -0.73
YFH1Q07540 RDN37-2RDN37-2 5354 nt10.47□□□□□ -0.73
YFH1Q07540 SIS1YNL007C 1059 nt10.46□□□□□ -0.73
YFH1Q07540 YDL221WYDL221W 552 nt10.43□□□□□ -0.74
YFH1Q07540 YBR220CYBR220C 1683 nt10.41□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms