Protein–RNA interactions for Protein: P40987

CIN1, Chromosome instability protein 1, yeastyeast

Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIN1P40987 YML009W-BYML009W-B 477 nt18.74■□□□□ 0.59
CIN1P40987 NSR1YGR159C 1245 nt18.63■□□□□ 0.57
CIN1P40987 NOP1YDL014W 984 nt18.32■□□□□ 0.52
CIN1P40987 YKL036CYKL036C 393 nt16.96■□□□□ 0.31
CIN1P40987 MDJ1YFL016C 1536 nt16.52■□□□□ 0.24
CIN1P40987 Q0297Q0297 156 nt16.07■□□□□ 0.16
CIN1P40987 SRX1YKL086W 384 nt16■□□□□ 0.15
CIN1P40987 YJL027CYJL027C 417 nt15.82■□□□□ 0.12
CIN1P40987 SCS3YGL126W 1143 nt15.45■□□□□ 0.06
CIN1P40987 YCR051WYCR051W 669 nt15.12■□□□□ 0.01
CIN1P40987 YOL085CYOL085C 342 nt14.68□□□□□ -0.06
CIN1P40987 DBP2YNL112W 1641 nt14.57□□□□□ -0.08
CIN1P40987 TRN1tP(UGG)A 72 nt14.42□□□□□ -0.1
CIN1P40987 SUF9tP(UGG)F 72 nt14.42□□□□□ -0.1
CIN1P40987 SUF8tP(UGG)H 72 nt14.42□□□□□ -0.1
CIN1P40987 tP(UGG)LtP(UGG)L 72 nt14.42□□□□□ -0.1
CIN1P40987 SUF7tP(UGG)M 72 nt14.42□□□□□ -0.1
CIN1P40987 tP(UGG)N1tP(UGG)N1 72 nt14.42□□□□□ -0.1
CIN1P40987 tP(UGG)N2tP(UGG)N2 72 nt14.42□□□□□ -0.1
CIN1P40987 tP(UGG)O1tP(UGG)O1 72 nt14.42□□□□□ -0.1
CIN1P40987 SUF11tP(UGG)O2 72 nt14.42□□□□□ -0.1
CIN1P40987 RPP1BYDL130W 321 nt14.4□□□□□ -0.1
CIN1P40987 PKP1YIL042C 1185 nt14.38□□□□□ -0.11
CIN1P40987 CCC1YLR220W 969 nt14.18□□□□□ -0.14
CIN1P40987 YBR190WYBR190W 312 nt14.16□□□□□ -0.14
CIN1P40987 SCJ1YMR214W 1134 nt13.89□□□□□ -0.19
CIN1P40987 SSA3YBL075C 1950 nt13.88□□□□□ -0.19
CIN1P40987 ATS1YAL020C 1002 nt13.86□□□□□ -0.19
CIN1P40987 RTC3YHR087W 336 nt13.83□□□□□ -0.2
CIN1P40987 RVS167YDR388W 1449 nt13.73□□□□□ -0.21
CIN1P40987 PET122YER153C 765 nt13.71□□□□□ -0.21
CIN1P40987 tP(UGG)O3tP(UGG)O3 72 nt13.65□□□□□ -0.22
CIN1P40987 SCR1SCR1 522 nt13.63□□□□□ -0.23
CIN1P40987 RRN5YLR141W 1092 nt13.33□□□□□ -0.28
CIN1P40987 SHR5YOL110W 714 nt13.28□□□□□ -0.28
CIN1P40987 YDJ1YNL064C 1230 nt13.25□□□□□ -0.29
CIN1P40987 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
CIN1P40987 YER088W-BYER088W-B 147 nt13.08□□□□□ -0.32
CIN1P40987 RSB1YOR049C 1065 nt13.06□□□□□ -0.32
CIN1P40987 GAR1YHR089C 618 nt12.86□□□□□ -0.35
CIN1P40987 PST2YDR032C 597 nt12.83□□□□□ -0.36
CIN1P40987 ARE1YCR048W 1833 nt12.82□□□□□ -0.36
CIN1P40987 URN1YPR152C 1398 nt12.81□□□□□ -0.36
CIN1P40987 DEP1YAL013W 1218 nt12.78□□□□□ -0.36
CIN1P40987 SAH1YER043C 1350 nt12.74□□□□□ -0.37
CIN1P40987 POA1YBR022W 534 nt12.73□□□□□ -0.37
CIN1P40987 OPI9YLR338W 858 nt12.71□□□□□ -0.37
CIN1P40987 RPN10YHR200W 807 nt12.69□□□□□ -0.38
CIN1P40987 YNL208WYNL208W 600 nt12.68□□□□□ -0.38
CIN1P40987 YHR049C-AYHR049C-A 297 nt12.65□□□□□ -0.38
CIN1P40987 BSC6YOL137W 1494 nt12.53□□□□□ -0.4
CIN1P40987 TIR1YER011W 765 nt12.46□□□□□ -0.41
CIN1P40987 YKL097CYKL097C 411 nt12.36□□□□□ -0.43
CIN1P40987 BUD23YCR047C 828 nt12.33□□□□□ -0.44
CIN1P40987 PUN1YLR414C 792 nt12.32□□□□□ -0.44
CIN1P40987 SSA1YAL005C 1929 nt12.27□□□□□ -0.44
CIN1P40987 SHU1YHL006C 453 nt12.26□□□□□ -0.45
CIN1P40987 PTC2YER089C 1395 nt12.25□□□□□ -0.45
CIN1P40987 YJR018WYJR018W 363 nt12.24□□□□□ -0.45
CIN1P40987 SPT5YML010W 3192 nt12.22□□□□□ -0.45
CIN1P40987 NAB2YGL122C 1578 nt12.13□□□□□ -0.47
CIN1P40987 YJR120WYJR120W 351 nt12.08□□□□□ -0.48
CIN1P40987 SRB2YHR041C 633 nt12.05□□□□□ -0.48
CIN1P40987 RPP2BYDR382W 333 nt12.04□□□□□ -0.48
CIN1P40987 YAL037C-BYAL037C-B 975 nt11.99□□□□□ -0.49
CIN1P40987 SSA4YER103W 1929 nt11.98□□□□□ -0.49
CIN1P40987 FIS1YIL065C 468 nt11.95□□□□□ -0.5
CIN1P40987 YGR021WYGR021W 873 nt11.92□□□□□ -0.5
CIN1P40987 DAL1YIR027C 1383 nt11.91□□□□□ -0.5
CIN1P40987 WWM1YFL010C 636 nt11.89□□□□□ -0.51
CIN1P40987 FPR4YLR449W 1179 nt11.87□□□□□ -0.51
CIN1P40987 HOM6YJR139C 1080 nt11.86□□□□□ -0.51
CIN1P40987 YOR139CYOR139C 393 nt11.84□□□□□ -0.51
CIN1P40987 INM2YDR287W 879 nt11.83□□□□□ -0.52
CIN1P40987 BDH2YAL061W 1254 nt11.82□□□□□ -0.52
CIN1P40987 PHO4YFR034C 939 nt11.81□□□□□ -0.52
CIN1P40987 MEP2YNL142W 1500 nt11.79□□□□□ -0.52
CIN1P40987 YFL021C-AYFL021C-A 855 nt11.76□□□□□ -0.53
CIN1P40987 MNP1YGL068W 585 nt11.76□□□□□ -0.53
CIN1P40987 Q0182Q0182 405 nt11.74□□□□□ -0.53
CIN1P40987 NPL3YDR432W 1245 nt11.72□□□□□ -0.53
CIN1P40987 LSM3YLR438C-A 270 nt11.71□□□□□ -0.53
CIN1P40987 YBL100CYBL100C 315 nt11.71□□□□□ -0.53
CIN1P40987 YPS1YLR120C 1710 nt11.71□□□□□ -0.54
CIN1P40987 YOL037CYOL037C 354 nt11.69□□□□□ -0.54
CIN1P40987 RKM5YLR137W 1104 nt11.68□□□□□ -0.54
CIN1P40987 PAC11YDR488C 1602 nt11.66□□□□□ -0.54
CIN1P40987 BDF1YLR399C 2061 nt11.64□□□□□ -0.55
CIN1P40987 DCW1YKL046C 1350 nt11.61□□□□□ -0.55
CIN1P40987 YHR165W-AYHR165W-A 312 nt11.6□□□□□ -0.55
CIN1P40987 YDR095CYDR095C 411 nt11.57□□□□□ -0.56
CIN1P40987 TRM9YML014W 840 nt11.57□□□□□ -0.56
CIN1P40987 FUN26YAL022C 1554 nt11.57□□□□□ -0.56
CIN1P40987 NVJ2YPR091C 2313 nt11.53□□□□□ -0.56
CIN1P40987 CCT6YDR188W 1641 nt11.48□□□□□ -0.57
CIN1P40987 TAT1YBR069C 1860 nt11.46□□□□□ -0.58
CIN1P40987 EMI2YDR516C 1503 nt11.45□□□□□ -0.58
CIN1P40987 ALF1YNL148C 765 nt11.39□□□□□ -0.59
CIN1P40987 tM(CAU)CtM(CAU)C 72 nt11.38□□□□□ -0.59
CIN1P40987 IMT4tM(CAU)E 72 nt11.38□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms