RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	LPD1	P09624	499 aa	Known RBP	4.91	□□□□□ -1.62
YDC1	YPL087W	RAP1	P11938	827 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	ICL1	P28240	557 aa	Predicted RBP	4.91	□□□□□ -1.62
YDC1	YPL087W	UBP13	P38187	747 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	ECM10	P39987	644 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	YGL242C	P53066	181 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	RPL15B	P54780	204 aa	Predicted RBP	4.91	□□□□□ -1.62
YDC1	YPL087W	YPL068C	Q02749	293 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	YML131W	Q03102	365 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	PFA5	Q03289	374 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	ECI1	Q05871	280 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	POS5	Q06892	414 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	SAC3	P46674	1301 aa		4.91	□□□□□ -1.62
YDC1	YPL087W	VPS13	Q07878	3144 aa		4.9	□□□□□ -1.62
YDC1	YPL087W	GPA1	P08539	472 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	ERG8	P24521	451 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	SMY1	P32364	656 aa	Known RBP	4.9	□□□□□ -1.63
YDC1	YPL087W	SAC1	P32368	623 aa	Known RBP	4.9	□□□□□ -1.63
YDC1	YPL087W	YIL089W	P40500	205 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	SMC3	P47037	1230 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	MUB1	Q03162	620 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	OPY2	Q06810	360 aa		4.9	□□□□□ -1.63
YDC1	YPL087W	SNU66	Q12420	587 aa	Predicted RBP	4.9	□□□□□ -1.63
YDC1	YPL087W	DUR1,2	P32528	1835 aa	Known RBP	4.89	□□□□□ -1.63
YDC1	YPL087W	YBR085C-A	O43137	85 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	RPL19A	P0CX82	189 aa	Known RBP	4.89	□□□□□ -1.63
YDC1	YPL087W	RPL19B	P0CX83	189 aa	Predicted RBP	4.89	□□□□□ -1.63
YDC1	YPL087W	KRS1	P15180	591 aa	Known RBP	4.89	□□□□□ -1.63
YDC1	YPL087W	OPI1	P21957	404 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	SSH4	P32343	579 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	SWP82	P43554	623 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	CAC2	Q04199	468 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	GSH2	Q08220	491 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	RIM20	Q12033	661 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	YPR117W	Q06116	2489 aa		4.89	□□□□□ -1.63
YDC1	YPL087W	SSK22	P25390	1331 aa	Predicted RBP	4.89	□□□□□ -1.63
YDC1	YPL087W	RPB2	P08518	1224 aa	Known RBP	4.88	□□□□□ -1.63
YDC1	YPL087W	PRE8	P23639	250 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	VPS41	P38959	992 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	VRG4	P40107	337 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	PKP1	P40530	394 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	IME4	P41833	600 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	IRC8	P47046	822 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	BNA1	P47096	177 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	RRT6	P53117	311 aa	Predicted RBP	4.88	□□□□□ -1.63
YDC1	YPL087W	ZDS2	P54786	942 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	VPS20	Q04272	221 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	YLR281C	Q05863	155 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	MCP2	Q06567	569 aa		4.88	□□□□□ -1.63
YDC1	YPL087W	DIB1	Q06819	143 aa	Predicted RBP	4.88	□□□□□ -1.63
YDC1	YPL087W	UTP10	P42945	1769 aa	Known RBP	4.88	□□□□□ -1.63
YDC1	YPL087W	PET111	P08468	800 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	TKL1	P23254	680 aa	Known RBP	4.87	□□□□□ -1.63
YDC1	YPL087W	STE50	P25344	346 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	YCP4	P25349	247 aa	Known RBP	4.87	□□□□□ -1.63
YDC1	YPL087W	RPN12	P32496	274 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	CBF2	P32504	956 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	PXL1	P36166	706 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	KTR3	P38130	404 aa	Predicted RBP	4.87	□□□□□ -1.63
YDC1	YPL087W	PFF1	P38244	976 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	SHC1	P39000	512 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	CBK1	P53894	756 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	DSE3	Q08729	430 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	FRE3	Q08905	711 aa		4.87	□□□□□ -1.63
YDC1	YPL087W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
YDC1	YPL087W	GUK1	P15454	187 aa	Known RBP	4.86	□□□□□ -1.63
YDC1	YPL087W	MRP20	P32387	263 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	ATO2	P32907	282 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	YKL050C	P35736	922 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	MIC60	P36112	540 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	UIP3	P39547	235 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	SLZ1	P40167	298 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	DPB11	P47027	764 aa	Predicted RBP	4.86	□□□□□ -1.63
YDC1	YPL087W	YGL036W	P53185	909 aa	Predicted RBP	4.86	□□□□□ -1.63
YDC1	YPL087W	NNF2	P53253	936 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	ARP10	Q04549	284 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	UTP21	Q06078	939 aa	Predicted RBP	4.86	□□□□□ -1.63
YDC1	YPL087W	SKG3	Q06315	1026 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	APL4	Q12028	832 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	YOR019W	Q99248	730 aa		4.86	□□□□□ -1.63
YDC1	YPL087W	PCL6	P40038	420 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	YJR061W	P40355	935 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	TCB2	P48231	1178 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	BSC5	P53755	489 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	ARP5	P53946	755 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	YMR178W	Q03219	274 aa	Known RBP	4.85	□□□□□ -1.63
YDC1	YPL087W	CTL1	Q03220	320 aa	Known RBP	4.85	□□□□□ -1.63
YDC1	YPL087W	GPN2	Q08726	347 aa	Predicted RBP	4.85	□□□□□ -1.63
YDC1	YPL087W	SKM1	Q12469	655 aa		4.85	□□□□□ -1.63
YDC1	YPL087W	YER145C-A	A0A023PYF4	145 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	RPL22A	P05749	121 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	FUM1	P08417	488 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	RPB8	P20436	146 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	CLB2	P24869	491 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	PRX1	P34227	261 aa	Known RBP	4.84	□□□□□ -1.63
YDC1	YPL087W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
YDC1	YPL087W	STV1	P37296	890 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	RKM3	P38222	552 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	AXL2	P38928	823 aa		4.84	□□□□□ -1.63
YDC1	YPL087W	TFG2	P41896	400 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms