RNA–Protein interactions for RNA: YJL142C

IRC9, Transcript of Dubious open reading frame, yeast

Gene IRC9, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC9	YJL142C	LCB1	P25045	558 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	CRM1	P30822	1084 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	PTR2	P32901	601 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	ATP3	P38077	311 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	APE4	P38821	490 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	LSM12	P38828	187 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	STN1	P38960	494 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	SER33	P40510	469 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	DIM1	P41819	318 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	IMD3	P50095	523 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	TAF6	P53040	516 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	RRT6	P53117	311 aa	Predicted RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	CUE3	P53137	624 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	DRN1	P53255	507 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	CNM67	P53865	581 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	YNL058C	P53947	316 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	ALD6	P54115	500 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	CEG1	Q01159	459 aa	Predicted RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	TAF12	Q03761	539 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	BUD22	Q04347	519 aa	Known RBP	4.04	□□□□□ -1.76
IRC9	YJL142C	RRN11	Q04712	507 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	COX20	Q04935	205 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	FMP42	Q04991	504 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	RSC3	Q06639	885 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	VPS36	Q06696	566 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	PIN2	Q12057	282 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	DAS2	Q12084	232 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	RAD61	Q99359	647 aa		4.04	□□□□□ -1.76
IRC9	YJL142C	CLN3	P13365	580 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
IRC9	YJL142C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
IRC9	YJL142C	APN1	P22936	367 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	URE2	P23202	354 aa	Known RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	RPC53	P25441	422 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	RPC25	P35718	212 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	STP2	P38704	541 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	SFB3	P38810	929 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	MTG2	P38860	518 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	YTA12	P40341	825 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	MNN11	P46985	422 aa	Known RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	TRF5	P48561	642 aa	Known RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	YGL108C	P53139	140 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	USE1	P53146	245 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	PIB2	P53191	635 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	NOG2	P53742	486 aa	Known RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	PNG1	Q02890	363 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	ABZ2	Q03266	374 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	YDR239C	Q03780	787 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	GAD1	Q04792	585 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	NSE3	Q05541	303 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	GLO2	Q05584	274 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	JIP5	Q06214	492 aa	Predicted RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	SMD2	Q06217	110 aa	Known RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	PSR2	Q07949	397 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	ALE1	Q08548	619 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	CLP1	Q08685	445 aa	Predicted RBP	4.03	□□□□□ -1.76
IRC9	YJL142C	VPS54	Q12071	889 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	BAG7	Q12128	409 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	MED4	Q12343	284 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	ARP6	Q12509	438 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	YPT6	Q99260	215 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	VCX1	Q99385	411 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	IRA1	P18963	3092 aa		4.03	□□□□□ -1.76
IRC9	YJL142C	FAS2	P19097	1887 aa	Known RBP	4.03	□□□□□ -1.77
IRC9	YJL142C	MF(ALPHA)1	P01149	165 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	TEF1	P02994	458 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	MSD1	P15179	658 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	DAP2	P18962	818 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	DBP3	P20447	523 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	CBP3	P21560	335 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	RPA135	P22138	1203 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	VPS3	P23643	1011 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	ZIP1	P31111	875 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	TPS2	P31688	896 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	FRD1	P32614	470 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	STE5	P32917	917 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	TFC4	P33339	1025 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	APL2	P36000	726 aa	Predicted RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	MCD4	P36051	919 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	RSM22	P36056	628 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	NTR2	P36118	322 aa	Predicted RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	SLM4	P38247	162 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	YBR138C	P38277	524 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	SET5	P38890	526 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	YHR218W	P38899	603 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	CCT6	P39079	546 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	ALD5	P40047	520 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	IES5	P40060	125 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	YER137C	P40083	148 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	YER186C	P40101	306 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	DPH1	P40487	425 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	YFL040W	P43562	540 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	IRC6	P43615	237 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	NMD5	P46970	1048 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	MDE1	P47095	244 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	EMC2	P47133	292 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	PSP1	P50896	841 aa	Known RBP	4.02	□□□□□ -1.77
IRC9	YJL142C	ZIP2	P53061	704 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	LIF1	P53150	421 aa		4.02	□□□□□ -1.77
IRC9	YJL142C	IMP4	P53941	290 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms