Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 NSR1YGR159C 1245 nt19.87■□□□□ 0.77
USE1P53146 YML009W-BYML009W-B 477 nt19.56■□□□□ 0.72
USE1P53146 NOP1YDL014W 984 nt18.75■□□□□ 0.59
USE1P53146 MDJ1YFL016C 1536 nt18.18■□□□□ 0.5
USE1P53146 YKL036CYKL036C 393 nt16.86■□□□□ 0.29
USE1P53146 YJL027CYJL027C 417 nt16.68■□□□□ 0.26
USE1P53146 SRX1YKL086W 384 nt16.43■□□□□ 0.22
USE1P53146 Q0297Q0297 156 nt16.3■□□□□ 0.2
USE1P53146 DBP2YNL112W 1641 nt15.92■□□□□ 0.14
USE1P53146 YBR190WYBR190W 312 nt15.59■□□□□ 0.09
USE1P53146 YCR051WYCR051W 669 nt15.53■□□□□ 0.08
USE1P53146 RTC3YHR087W 336 nt15.21■□□□□ 0.03
USE1P53146 TRN1tP(UGG)A 72 nt15.18■□□□□ 0.02
USE1P53146 SUF9tP(UGG)F 72 nt15.18■□□□□ 0.02
USE1P53146 SUF8tP(UGG)H 72 nt15.18■□□□□ 0.02
USE1P53146 tP(UGG)LtP(UGG)L 72 nt15.18■□□□□ 0.02
USE1P53146 SUF7tP(UGG)M 72 nt15.18■□□□□ 0.02
USE1P53146 tP(UGG)N1tP(UGG)N1 72 nt15.18■□□□□ 0.02
USE1P53146 tP(UGG)N2tP(UGG)N2 72 nt15.18■□□□□ 0.02
USE1P53146 tP(UGG)O1tP(UGG)O1 72 nt15.18■□□□□ 0.02
USE1P53146 SUF11tP(UGG)O2 72 nt15.18■□□□□ 0.02
USE1P53146 SCS3YGL126W 1143 nt15.11■□□□□ 0.01
USE1P53146 CCC1YLR220W 969 nt15.01□□□□□ -0.01
USE1P53146 SSA3YBL075C 1950 nt14.91□□□□□ -0.02
USE1P53146 RVS167YDR388W 1449 nt14.72□□□□□ -0.05
USE1P53146 SCJ1YMR214W 1134 nt14.66□□□□□ -0.06
USE1P53146 YOL085CYOL085C 342 nt14.66□□□□□ -0.06
USE1P53146 PUT4YOR348C 1884 nt14.62□□□□□ -0.07
USE1P53146 RPP1BYDL130W 321 nt14.61□□□□□ -0.07
USE1P53146 PKP1YIL042C 1185 nt14.51□□□□□ -0.09
USE1P53146 ARE1YCR048W 1833 nt14.2□□□□□ -0.14
USE1P53146 tP(UGG)O3tP(UGG)O3 72 nt14.19□□□□□ -0.14
USE1P53146 SHR5YOL110W 714 nt14.14□□□□□ -0.15
USE1P53146 POA1YBR022W 534 nt14.1□□□□□ -0.15
USE1P53146 URN1YPR152C 1398 nt14.07□□□□□ -0.16
USE1P53146 PET122YER153C 765 nt14.06□□□□□ -0.16
USE1P53146 SAH1YER043C 1350 nt14.04□□□□□ -0.16
USE1P53146 YHR049C-AYHR049C-A 297 nt13.98□□□□□ -0.17
USE1P53146 OPI9YLR338W 858 nt13.97□□□□□ -0.17
USE1P53146 DEP1YAL013W 1218 nt13.94□□□□□ -0.18
USE1P53146 BSC6YOL137W 1494 nt13.9□□□□□ -0.18
USE1P53146 YDJ1YNL064C 1230 nt13.71□□□□□ -0.21
USE1P53146 SPT5YML010W 3192 nt13.7□□□□□ -0.22
USE1P53146 SCR1SCR1 522 nt13.69□□□□□ -0.22
USE1P53146 RPN10YHR200W 807 nt13.68□□□□□ -0.22
USE1P53146 YNL208WYNL208W 600 nt13.63□□□□□ -0.23
USE1P53146 BUD23YCR047C 828 nt13.6□□□□□ -0.23
USE1P53146 RRN5YLR141W 1092 nt13.6□□□□□ -0.23
USE1P53146 PUN1YLR414C 792 nt13.53□□□□□ -0.24
USE1P53146 GAR1YHR089C 618 nt13.51□□□□□ -0.25
USE1P53146 PTC2YER089C 1395 nt13.49□□□□□ -0.25
USE1P53146 SSA4YER103W 1929 nt13.41□□□□□ -0.26
USE1P53146 YJR018WYJR018W 363 nt13.38□□□□□ -0.27
USE1P53146 ATS1YAL020C 1002 nt13.37□□□□□ -0.27
USE1P53146 NAB2YGL122C 1578 nt13.36□□□□□ -0.27
USE1P53146 YER088W-BYER088W-B 147 nt13.33□□□□□ -0.28
USE1P53146 FIS1YIL065C 468 nt13.18□□□□□ -0.3
USE1P53146 YJR120WYJR120W 351 nt13.16□□□□□ -0.3
USE1P53146 RSB1YOR049C 1065 nt13.13□□□□□ -0.31
USE1P53146 DAL1YIR027C 1383 nt13.09□□□□□ -0.31
USE1P53146 MEP2YNL142W 1500 nt13.09□□□□□ -0.31
USE1P53146 TIR1YER011W 765 nt13.07□□□□□ -0.32
USE1P53146 SSA1YAL005C 1929 nt13.06□□□□□ -0.32
USE1P53146 FPR4YLR449W 1179 nt13.05□□□□□ -0.32
USE1P53146 PHO4YFR034C 939 nt13□□□□□ -0.33
USE1P53146 BDF1YLR399C 2061 nt12.97□□□□□ -0.33
USE1P53146 INM2YDR287W 879 nt12.95□□□□□ -0.34
USE1P53146 YPS1YLR120C 1710 nt12.93□□□□□ -0.34
USE1P53146 RPP2BYDR382W 333 nt12.92□□□□□ -0.34
USE1P53146 DCW1YKL046C 1350 nt12.91□□□□□ -0.34
USE1P53146 SRB2YHR041C 633 nt12.82□□□□□ -0.36
USE1P53146 YHR165W-AYHR165W-A 312 nt12.79□□□□□ -0.36
USE1P53146 TAT1YBR069C 1860 nt12.78□□□□□ -0.36
USE1P53146 YDR095CYDR095C 411 nt12.77□□□□□ -0.37
USE1P53146 YBL100CYBL100C 315 nt12.76□□□□□ -0.37
USE1P53146 EMI2YDR516C 1503 nt12.7□□□□□ -0.38
USE1P53146 YBR220CYBR220C 1683 nt12.65□□□□□ -0.38
USE1P53146 BDH2YAL061W 1254 nt12.62□□□□□ -0.39
USE1P53146 FUN26YAL022C 1554 nt12.6□□□□□ -0.39
USE1P53146 PTP1YDL230W 1008 nt12.58□□□□□ -0.4
USE1P53146 CAC2YML102W 1407 nt12.58□□□□□ -0.4
USE1P53146 YMR090WYMR090W 684 nt12.57□□□□□ -0.4
USE1P53146 YDL221WYDL221W 552 nt12.56□□□□□ -0.4
USE1P53146 RPP2AYOL039W 321 nt12.51□□□□□ -0.41
USE1P53146 SDH1YKL148C 1923 nt12.5□□□□□ -0.41
USE1P53146 PST2YDR032C 597 nt12.49□□□□□ -0.41
USE1P53146 ALF1YNL148C 765 nt12.48□□□□□ -0.41
USE1P53146 TRM9YML014W 840 nt12.45□□□□□ -0.42
USE1P53146 WWM1YFL010C 636 nt12.44□□□□□ -0.42
USE1P53146 IRC15YPL017C 1500 nt12.39□□□□□ -0.43
USE1P53146 CCT6YDR188W 1641 nt12.37□□□□□ -0.43
USE1P53146 SIS1YNL007C 1059 nt12.36□□□□□ -0.43
USE1P53146 LSM3YLR438C-A 270 nt12.35□□□□□ -0.43
USE1P53146 SCC4YER147C 1875 nt12.35□□□□□ -0.43
USE1P53146 GIS3YLR094C 1509 nt12.31□□□□□ -0.44
USE1P53146 PCH2YBR186W 1695 nt12.27□□□□□ -0.45
USE1P53146 SUF2tP(AGG)C 72 nt12.26□□□□□ -0.45
USE1P53146 SUF10tP(AGG)N 72 nt12.26□□□□□ -0.45
USE1P53146 GFD2YCL036W 1701 nt12.25□□□□□ -0.45
USE1P53146 ART5YGR068C 1761 nt12.24□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms