RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W SMI1P32566 505 aa2.11□□□□□ -2.07
VPS8YAL002W STE14P32584 239 aa2.11□□□□□ -2.07
VPS8YAL002W COY1P34237 679 aa2.11□□□□□ -2.07
VPS8YAL002W LAS1P36146 502 aaPredicted RBP2.11□□□□□ -2.07
VPS8YAL002W PTR3P43606 678 aa2.11□□□□□ -2.07
VPS8YAL002W ROK1P45818 564 aaPredicted RBP2.11□□□□□ -2.07
VPS8YAL002W GLO1P50107 326 aa2.11□□□□□ -2.07
VPS8YAL002W NUP84P52891 726 aa2.11□□□□□ -2.07
VPS8YAL002W TOF1P53840 1238 aa2.11□□□□□ -2.07
VPS8YAL002W DUG3P53871 357 aa2.11□□□□□ -2.07
VPS8YAL002W UBP16Q02863 499 aa2.11□□□□□ -2.07
VPS8YAL002W RGC1Q06108 1083 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W DBP9Q06218 594 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W NOP12Q08208 459 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W YKL033W-AQ86ZR7 236 aa2.11□□□□□ -2.07
VPS8YAL002W RPB2P08518 1224 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W LAT1P12695 482 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W MDH1P17505 334 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
VPS8YAL002W VPS33P20795 691 aa2.11□□□□□ -2.07
VPS8YAL002W GCS1P35197 352 aa2.11□□□□□ -2.07
VPS8YAL002W CCL1P37366 393 aa2.11□□□□□ -2.07
VPS8YAL002W CDS1P38221 457 aa2.11□□□□□ -2.07
VPS8YAL002W SIF2P38262 535 aa2.11□□□□□ -2.07
VPS8YAL002W GND1P38720 489 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W MET18P40469 1032 aa2.11□□□□□ -2.07
VPS8YAL002W SEC24P40482 926 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W YIP4P53093 235 aa2.11□□□□□ -2.07
VPS8YAL002W ARG7Q04728 441 aa2.11□□□□□ -2.07
VPS8YAL002W ADY4Q05955 493 aa2.11□□□□□ -2.07
VPS8YAL002W RUD3Q12234 484 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W YMR084WA2P2R3 262 aa2.11□□□□□ -2.07
VPS8YAL002W KAR3P17119 729 aa2.11□□□□□ -2.07
VPS8YAL002W CLB1P24868 471 aa2.11□□□□□ -2.07
VPS8YAL002W YJU2P28320 278 aaPredicted RBP2.11□□□□□ -2.07
VPS8YAL002W PPQ1P32945 549 aa2.11□□□□□ -2.07
VPS8YAL002W PCH2P38126 564 aa2.11□□□□□ -2.07
VPS8YAL002W SGN1P40561 250 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
VPS8YAL002W RPN14P53196 417 aa2.11□□□□□ -2.07
VPS8YAL002W YGR151CP53287 111 aa2.11□□□□□ -2.07
VPS8YAL002W RIA1P53893 1110 aa2.11□□□□□ -2.07
VPS8YAL002W ARP5P53946 755 aa2.11□□□□□ -2.07
VPS8YAL002W RRN5Q02983 363 aa2.11□□□□□ -2.07
VPS8YAL002W CIR2Q08822 631 aa2.11□□□□□ -2.07
VPS8YAL002W RTC5Q12108 567 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W RRP5Q05022 1729 aaKnown RBP2.11□□□□□ -2.07
VPS8YAL002W SNF2P22082 1703 aa2.1□□□□□ -2.07
VPS8YAL002W DBP3P20447 523 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W CPR2P23285 205 aa2.1□□□□□ -2.07
VPS8YAL002W CDC20P26309 610 aa2.1□□□□□ -2.07
VPS8YAL002W URA7P28274 579 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W LHS1P36016 881 aa2.1□□□□□ -2.07
VPS8YAL002W DAD2P36162 133 aa2.1□□□□□ -2.07
VPS8YAL002W SMF1P38925 575 aa2.1□□□□□ -2.07
VPS8YAL002W SMC2P38989 1170 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W SEC9P40357 651 aa2.1□□□□□ -2.07
VPS8YAL002W IME4P41833 600 aa2.1□□□□□ -2.07
VPS8YAL002W AIP1P46680 615 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W COS12P53053 380 aa2.1□□□□□ -2.07
VPS8YAL002W CAF130P53280 1122 aaPredicted RBP2.1□□□□□ -2.07
VPS8YAL002W GTB1Q04924 702 aa2.1□□□□□ -2.07
VPS8YAL002W CRN1Q06440 651 aa2.1□□□□□ -2.07
VPS8YAL002W YPR172WQ06608 200 aa2.1□□□□□ -2.07
VPS8YAL002W AFI1Q99222 893 aa2.1□□□□□ -2.07
VPS8YAL002W TPK2P06245 380 aa2.1□□□□□ -2.07
VPS8YAL002W HNM1P19807 563 aa2.1□□□□□ -2.07
VPS8YAL002W MSP1P28737 362 aa2.1□□□□□ -2.07
VPS8YAL002W HRR25P29295 494 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W DCG1P32460 244 aa2.1□□□□□ -2.07
VPS8YAL002W ARO9P38840 513 aaPredicted RBP2.1□□□□□ -2.07
VPS8YAL002W FMP10P40098 244 aa2.1□□□□□ -2.07
VPS8YAL002W MET28P40573 187 aa2.1□□□□□ -2.07
VPS8YAL002W AMA1P50082 593 aa2.1□□□□□ -2.07
VPS8YAL002W DIA3P52290 468 aa2.1□□□□□ -2.07
VPS8YAL002W CSL4P53859 292 aaPredicted RBP2.1□□□□□ -2.07
VPS8YAL002W PHO92Q06390 306 aa2.1□□□□□ -2.07
VPS8YAL002W PSY3Q12318 242 aa2.1□□□□□ -2.07
VPS8YAL002W PPH22P23595 377 aa2.1□□□□□ -2.07
VPS8YAL002W RRP43P25359 394 aaPredicted RBP2.1□□□□□ -2.07
VPS8YAL002W CAP1P28495 268 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W MTC7P32633 139 aa2.1□□□□□ -2.07
VPS8YAL002W YME1P32795 747 aa2.1□□□□□ -2.07
VPS8YAL002W SUR1P33300 382 aa2.1□□□□□ -2.07
VPS8YAL002W LOT5P34234 306 aa2.1□□□□□ -2.07
VPS8YAL002W HEL1P36113 551 aa2.1□□□□□ -2.07
VPS8YAL002W MRPL7P36519 292 aa2.1□□□□□ -2.07
VPS8YAL002W HRB1P38922 454 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
VPS8YAL002W ATF1P40353 525 aa2.1□□□□□ -2.07
VPS8YAL002W SHE4P51534 789 aa2.1□□□□□ -2.07
VPS8YAL002W VID30P53076 958 aa2.1□□□□□ -2.07
VPS8YAL002W VPS62P53285 467 aa2.1□□□□□ -2.07
VPS8YAL002W YNR068CP53754 272 aa2.1□□□□□ -2.07
VPS8YAL002W YLR456WQ06199 204 aa2.1□□□□□ -2.07
VPS8YAL002W SPE3Q12074 293 aaKnown RBP2.1□□□□□ -2.07
VPS8YAL002W YOL159C-AQ3E769 90 aa2.1□□□□□ -2.07
VPS8YAL002W PDE2P06776 526 aa2.09□□□□□ -2.07
VPS8YAL002W PGM1P33401 570 aaKnown RBP2.09□□□□□ -2.07
VPS8YAL002W AUR1P36107 401 aaPredicted RBP2.09□□□□□ -2.07
VPS8YAL002W YBL028CP38202 106 aa2.09□□□□□ -2.07
VPS8YAL002W ICS2P38284 255 aa2.09□□□□□ -2.07
VPS8YAL002W TDP1P38319 544 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms