Protein–RNA interactions for Protein: P38262

SIF2, SIR4-interacting protein SIF2, yeastyeast

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIF2P38262 YML009W-BYML009W-B 477 nt21.53■■□□□ 1.04
SIF2P38262 NSR1YGR159C 1245 nt21.14■□□□□ 0.97
SIF2P38262 NOP1YDL014W 984 nt20.93■□□□□ 0.94
SIF2P38262 YKL036CYKL036C 393 nt19.62■□□□□ 0.73
SIF2P38262 MDJ1YFL016C 1536 nt18.64■□□□□ 0.57
SIF2P38262 Q0297Q0297 156 nt18.49■□□□□ 0.55
SIF2P38262 SRX1YKL086W 384 nt18.37■□□□□ 0.53
SIF2P38262 YJL027CYJL027C 417 nt18.36■□□□□ 0.53
SIF2P38262 SCS3YGL126W 1143 nt18.05■□□□□ 0.48
SIF2P38262 YCR051WYCR051W 669 nt17.45■□□□□ 0.38
SIF2P38262 YOL085CYOL085C 342 nt17.04■□□□□ 0.32
SIF2P38262 PKP1YIL042C 1185 nt16.8■□□□□ 0.28
SIF2P38262 DBP2YNL112W 1641 nt16.63■□□□□ 0.25
SIF2P38262 RPP1BYDL130W 321 nt16.59■□□□□ 0.25
SIF2P38262 TRN1tP(UGG)A 72 nt16.49■□□□□ 0.23
SIF2P38262 SUF9tP(UGG)F 72 nt16.49■□□□□ 0.23
SIF2P38262 SUF8tP(UGG)H 72 nt16.49■□□□□ 0.23
SIF2P38262 tP(UGG)LtP(UGG)L 72 nt16.49■□□□□ 0.23
SIF2P38262 SUF7tP(UGG)M 72 nt16.49■□□□□ 0.23
SIF2P38262 tP(UGG)N1tP(UGG)N1 72 nt16.49■□□□□ 0.23
SIF2P38262 tP(UGG)N2tP(UGG)N2 72 nt16.49■□□□□ 0.23
SIF2P38262 tP(UGG)O1tP(UGG)O1 72 nt16.49■□□□□ 0.23
SIF2P38262 SUF11tP(UGG)O2 72 nt16.49■□□□□ 0.23
SIF2P38262 CCC1YLR220W 969 nt16.33■□□□□ 0.2
SIF2P38262 ATS1YAL020C 1002 nt16.2■□□□□ 0.18
SIF2P38262 SCJ1YMR214W 1134 nt16.2■□□□□ 0.18
SIF2P38262 PET122YER153C 765 nt15.87■□□□□ 0.13
SIF2P38262 YBR190WYBR190W 312 nt15.73■□□□□ 0.11
SIF2P38262 tP(UGG)O3tP(UGG)O3 72 nt15.69■□□□□ 0.1
SIF2P38262 SCR1SCR1 522 nt15.64■□□□□ 0.09
SIF2P38262 RVS167YDR388W 1449 nt15.5■□□□□ 0.07
SIF2P38262 RRN5YLR141W 1092 nt15.43■□□□□ 0.06
SIF2P38262 RTC3YHR087W 336 nt15.39■□□□□ 0.05
SIF2P38262 YER088W-BYER088W-B 147 nt15.14■□□□□ 0.01
SIF2P38262 RSB1YOR049C 1065 nt15.14■□□□□ 0.01
SIF2P38262 YDJ1YNL064C 1230 nt15.13■□□□□ 0.01
SIF2P38262 SHR5YOL110W 714 nt15.09■□□□□ 0.01
SIF2P38262 PST2YDR032C 597 nt14.98□□□□□ -0.01
SIF2P38262 GAR1YHR089C 618 nt14.79□□□□□ -0.04
SIF2P38262 DEP1YAL013W 1218 nt14.65□□□□□ -0.06
SIF2P38262 URN1YPR152C 1398 nt14.54□□□□□ -0.08
SIF2P38262 YKL097CYKL097C 411 nt14.45□□□□□ -0.1
SIF2P38262 YNL208WYNL208W 600 nt14.37□□□□□ -0.11
SIF2P38262 SHU1YHL006C 453 nt14.34□□□□□ -0.11
SIF2P38262 TIR1YER011W 765 nt14.27□□□□□ -0.13
SIF2P38262 OPI9YLR338W 858 nt14.27□□□□□ -0.13
SIF2P38262 RPN10YHR200W 807 nt14.26□□□□□ -0.13
SIF2P38262 PUT4YOR348C 1884 nt14.18□□□□□ -0.14
SIF2P38262 SAH1YER043C 1350 nt14.16□□□□□ -0.14
SIF2P38262 SSA1YAL005C 1929 nt14.12□□□□□ -0.15
SIF2P38262 YAL037C-BYAL037C-B 975 nt14.08□□□□□ -0.16
SIF2P38262 SRB2YHR041C 633 nt14.05□□□□□ -0.16
SIF2P38262 ARE1YCR048W 1833 nt14.01□□□□□ -0.17
SIF2P38262 YOR139CYOR139C 393 nt13.95□□□□□ -0.18
SIF2P38262 SSA3YBL075C 1950 nt13.92□□□□□ -0.18
SIF2P38262 YJR018WYJR018W 363 nt13.87□□□□□ -0.19
SIF2P38262 YJR120WYJR120W 351 nt13.86□□□□□ -0.19
SIF2P38262 PUN1YLR414C 792 nt13.8□□□□□ -0.2
SIF2P38262 YHR049C-AYHR049C-A 297 nt13.78□□□□□ -0.2
SIF2P38262 POA1YBR022W 534 nt13.75□□□□□ -0.21
SIF2P38262 WWM1YFL010C 636 nt13.74□□□□□ -0.21
SIF2P38262 MNP1YGL068W 585 nt13.69□□□□□ -0.22
SIF2P38262 HOM6YJR139C 1080 nt13.68□□□□□ -0.22
SIF2P38262 PTC2YER089C 1395 nt13.65□□□□□ -0.22
SIF2P38262 NPL3YDR432W 1245 nt13.63□□□□□ -0.23
SIF2P38262 YGR021WYGR021W 873 nt13.6□□□□□ -0.23
SIF2P38262 RPP2BYDR382W 333 nt13.57□□□□□ -0.24
SIF2P38262 BUD23YCR047C 828 nt13.46□□□□□ -0.25
SIF2P38262 RKM5YLR137W 1104 nt13.46□□□□□ -0.25
SIF2P38262 YOL037CYOL037C 354 nt13.44□□□□□ -0.26
SIF2P38262 YFL021C-AYFL021C-A 855 nt13.43□□□□□ -0.26
SIF2P38262 BDH2YAL061W 1254 nt13.42□□□□□ -0.26
SIF2P38262 NAB2YGL122C 1578 nt13.41□□□□□ -0.26
SIF2P38262 BSC6YOL137W 1494 nt13.38□□□□□ -0.27
SIF2P38262 tM(CAU)CtM(CAU)C 72 nt13.36□□□□□ -0.27
SIF2P38262 IMT4tM(CAU)E 72 nt13.36□□□□□ -0.27
SIF2P38262 IMT3tM(CAU)J3 72 nt13.36□□□□□ -0.27
SIF2P38262 IMT1tM(CAU)O1 72 nt13.36□□□□□ -0.27
SIF2P38262 IMT2tM(CAU)P 72 nt13.36□□□□□ -0.27
SIF2P38262 FIS1YIL065C 468 nt13.32□□□□□ -0.28
SIF2P38262 INM2YDR287W 879 nt13.29□□□□□ -0.28
SIF2P38262 DAL1YIR027C 1383 nt13.29□□□□□ -0.28
SIF2P38262 LSM3YLR438C-A 270 nt13.27□□□□□ -0.29
SIF2P38262 FPR4YLR449W 1179 nt13.26□□□□□ -0.29
SIF2P38262 YBL100CYBL100C 315 nt13.25□□□□□ -0.29
SIF2P38262 YLR281CYLR281C 468 nt13.19□□□□□ -0.3
SIF2P38262 PHO4YFR034C 939 nt13.18□□□□□ -0.3
SIF2P38262 PUS2YGL063W 1113 nt13.14□□□□□ -0.31
SIF2P38262 FUN26YAL022C 1554 nt13.12□□□□□ -0.31
SIF2P38262 WHI5YOR083W 888 nt13.1□□□□□ -0.31
SIF2P38262 TRM9YML014W 840 nt13.09□□□□□ -0.31
SIF2P38262 CCT6YDR188W 1641 nt12.99□□□□□ -0.33
SIF2P38262 YPR011CYPR011C 981 nt12.98□□□□□ -0.33
SIF2P38262 MOT3YMR070W 1473 nt12.91□□□□□ -0.34
SIF2P38262 YLR154C-GYLR154C-G 150 nt12.89□□□□□ -0.35
SIF2P38262 YLR236CYLR236C 324 nt12.89□□□□□ -0.35
SIF2P38262 YPS1YLR120C 1710 nt12.85□□□□□ -0.35
SIF2P38262 DSK2YMR276W 1122 nt12.82□□□□□ -0.36
SIF2P38262 FMP45YDL222C 930 nt12.81□□□□□ -0.36
SIF2P38262 YDR095CYDR095C 411 nt12.8□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms