RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W UBX3Q12229 455 aa8.49□□□□□ -1.05
AMF1YOR378W MDY2Q12285 212 aa8.49□□□□□ -1.05
AMF1YOR378W SPS1P08458 490 aa8.48□□□□□ -1.05
AMF1YOR378W RPB4P20433 221 aaPredicted RBP8.48□□□□□ -1.05
AMF1YOR378W BAS1P22035 811 aa8.48□□□□□ -1.05
AMF1YOR378W PHO3P24031 467 aa8.48□□□□□ -1.05
AMF1YOR378W DEP1P31385 405 aa8.48□□□□□ -1.05
AMF1YOR378W YSC84P32793 468 aa8.48□□□□□ -1.05
AMF1YOR378W CSE1P33307 960 aa8.48□□□□□ -1.05
AMF1YOR378W PRP18P33411 251 aaPredicted RBP8.48□□□□□ -1.05
AMF1YOR378W RRN3P36070 627 aa8.48□□□□□ -1.05
AMF1YOR378W MUP3P38734 546 aa8.48□□□□□ -1.05
AMF1YOR378W MGS1P40151 587 aa8.48□□□□□ -1.05
AMF1YOR378W SER33P40510 469 aa8.48□□□□□ -1.05
AMF1YOR378W IRR1P40541 1150 aa8.48□□□□□ -1.05
AMF1YOR378W AXL1P40851 1208 aa8.48□□□□□ -1.05
AMF1YOR378W GCD14P46959 383 aaPredicted RBP8.48□□□□□ -1.05
AMF1YOR378W MAD3P47074 515 aa8.48□□□□□ -1.05
AMF1YOR378W COG7P53195 279 aa8.48□□□□□ -1.05
AMF1YOR378W SUB1P54000 292 aaKnown RBP8.48□□□□□ -1.05
AMF1YOR378W TVP15Q03860 143 aa8.48□□□□□ -1.05
AMF1YOR378W BLS1Q06071 122 aa8.48□□□□□ -1.05
AMF1YOR378W VTA1Q06263 330 aa8.48□□□□□ -1.05
AMF1YOR378W BUD7Q08754 746 aa8.48□□□□□ -1.05
AMF1YOR378W APC9Q12107 265 aa8.48□□□□□ -1.05
AMF1YOR378W MRH1Q12117 320 aaPredicted RBP8.48□□□□□ -1.05
AMF1YOR378W NOT5Q12514 560 aaPredicted RBP8.48□□□□□ -1.05
AMF1YOR378W YPT6Q99260 215 aa8.48□□□□□ -1.05
AMF1YOR378W SEM1O94742 89 aa8.47□□□□□ -1.05
AMF1YOR378W SEC53P07283 254 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W MPH2P0CD99 609 aa8.47□□□□□ -1.05
AMF1YOR378W SBP1P10080 294 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W HSC82P15108 705 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W VAC17P25591 423 aa8.47□□□□□ -1.05
AMF1YOR378W TFC3P34111 1160 aa8.47□□□□□ -1.05
AMF1YOR378W HEK2P38199 381 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05 RIP-Chip
AMF1YOR378W YDR089WP38966 869 aa8.47□□□□□ -1.05
AMF1YOR378W GDH3P39708 457 aa8.47□□□□□ -1.05
AMF1YOR378W LSB3P43603 459 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W SET2P46995 733 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W YNR014WP53719 212 aa8.47□□□□□ -1.05
AMF1YOR378W FRE4P53746 719 aa8.47□□□□□ -1.05
AMF1YOR378W TDA7P53882 636 aaPredicted RBP8.47□□□□□ -1.05
AMF1YOR378W ARP4P80428 489 aa8.47□□□□□ -1.05
AMF1YOR378W OSH6Q02201 448 aa8.47□□□□□ -1.05
AMF1YOR378W CLU1Q03690 1277 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W SEC10Q06245 871 aa8.47□□□□□ -1.05
AMF1YOR378W HBT1Q07653 1046 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W TMA46Q12000 345 aaKnown RBP8.47□□□□□ -1.05
AMF1YOR378W YPR089WO13585 888 aa8.46□□□□□ -1.05
AMF1YOR378W GAL11P19659 1081 aa8.46□□□□□ -1.05
AMF1YOR378W YCR090CP25654 182 aaKnown RBP8.46□□□□□ -1.05
AMF1YOR378W PMT1P33775 817 aa8.46□□□□□ -1.05
AMF1YOR378W EFM1P38732 585 aa8.46□□□□□ -1.05
AMF1YOR378W SWC4P53201 476 aa8.46□□□□□ -1.05
AMF1YOR378W BIO5P53744 561 aaKnown RBP8.46□□□□□ -1.05
AMF1YOR378W NPL3Q01560 414 aaKnown RBP RIP-Chip data8.46□□□□□ -1.05not detected
AMF1YOR378W SPO20Q04359 397 aa8.46□□□□□ -1.05
AMF1YOR378W YOR012WQ12351 137 aa8.46□□□□□ -1.05
AMF1YOR378W ICT1Q12385 394 aa8.46□□□□□ -1.05
AMF1YOR378W UBR1P19812 1950 aa8.46□□□□□ -1.06
AMF1YOR378W FAB1P34756 2278 aa8.46□□□□□ -1.06
AMF1YOR378W RHO2P06781 192 aa8.45□□□□□ -1.06
AMF1YOR378W EPT1P22140 391 aa8.45□□□□□ -1.06
AMF1YOR378W VAN1P23642 535 aa8.45□□□□□ -1.06
AMF1YOR378W PTM1P32857 523 aa8.45□□□□□ -1.06
AMF1YOR378W SPT23P35210 1082 aa8.45□□□□□ -1.06
AMF1YOR378W DBP8P38719 431 aa8.45□□□□□ -1.06
AMF1YOR378W YHR078WP38799 552 aa8.45□□□□□ -1.06
AMF1YOR378W TIM17P39515 158 aa8.45□□□□□ -1.06
AMF1YOR378W YHB1P39676 399 aaKnown RBP8.45□□□□□ -1.06
AMF1YOR378W AIF1P52923 378 aa8.45□□□□□ -1.06
AMF1YOR378W MRM2P53123 320 aa8.45□□□□□ -1.06
AMF1YOR378W CLD1P53264 445 aa8.45□□□□□ -1.06
AMF1YOR378W FAP1P53971 965 aa8.45□□□□□ -1.06
AMF1YOR378W CCE1Q03702 353 aa8.45□□□□□ -1.06
AMF1YOR378W ALR1Q08269 859 aa8.45□□□□□ -1.06
AMF1YOR378W GTT2Q12390 233 aa8.45□□□□□ -1.06
AMF1YOR378W STB3Q12427 513 aa8.45□□□□□ -1.06
AMF1YOR378W HEM2P05373 342 aa8.44□□□□□ -1.06
AMF1YOR378W RAD3P06839 778 aa8.44□□□□□ -1.06
AMF1YOR378W THI80P35202 319 aa8.44□□□□□ -1.06
AMF1YOR378W PCL5P38794 229 aa8.44□□□□□ -1.06
AMF1YOR378W NNF1P47149 201 aa8.44□□□□□ -1.06
AMF1YOR378W RMI1Q02685 241 aa8.44□□□□□ -1.06
AMF1YOR378W TAF12Q03761 539 aa8.44□□□□□ -1.06
AMF1YOR378W ENT4Q07872 247 aa8.44□□□□□ -1.06
AMF1YOR378W SMF3Q12078 473 aaPredicted RBP8.44□□□□□ -1.06
AMF1YOR378W YPL247CQ12523 523 aa8.44□□□□□ -1.06
AMF1YOR378W CPA1P07258 411 aaKnown RBP8.44□□□□□ -1.06
AMF1YOR378W NMT1P14743 455 aa8.44□□□□□ -1.06
AMF1YOR378W PRP16P15938 1071 aaPredicted RBP8.44□□□□□ -1.06
AMF1YOR378W SEC15P22224 910 aa8.44□□□□□ -1.06
AMF1YOR378W SFP1P32432 683 aa8.44□□□□□ -1.06
AMF1YOR378W TIP20P33891 701 aa8.44□□□□□ -1.06
AMF1YOR378W SKT5P34226 696 aa8.44□□□□□ -1.06
AMF1YOR378W LRG1P35688 1017 aa8.44□□□□□ -1.06
AMF1YOR378W VRP1P37370 817 aa8.44□□□□□ -1.06
AMF1YOR378W ARP1P38696 384 aa8.44□□□□□ -1.06
AMF1YOR378W PPX1P38698 397 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms