RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W SGS1P35187 1447 aa15.78■□□□□ 0.12
AMF1YOR378W INO80P53115 1489 aa15.58■□□□□ 0.08
AMF1YOR378W MON2P48563 1636 aaPredicted RBP15.58■□□□□ 0.08
AMF1YOR378W TCB3Q03640 1545 aaKnown RBP15.5■□□□□ 0.07
AMF1YOR378W TY1B-DR4Q07793 1604 aa15.3■□□□□ 0.04
AMF1YOR378W SWR1Q05471 1514 aa15.13■□□□□ 0.01
AMF1YOR378W HSL1P34244 1518 aa14.96□□□□□ -0.01
AMF1YOR378W SPT6P23615 1451 aaKnown RBP14.94□□□□□ -0.02
AMF1YOR378W SSN2P38931 1420 aa14.88□□□□□ -0.03
AMF1YOR378W SPA2P23201 1466 aaKnown RBP14.85□□□□□ -0.03
AMF1YOR378W DNA2P38859 1522 aa14.84□□□□□ -0.03
AMF1YOR378W KOG1P38873 1557 aa14.74□□□□□ -0.05
AMF1YOR378W HIR3P47171 1648 aa14.67□□□□□ -0.06
AMF1YOR378W XRN1P22147 1528 aaKnown RBP14.53□□□□□ -0.08
AMF1YOR378W DRS1P32892 752 aaKnown RBP14.46□□□□□ -0.1
AMF1YOR378W BUD4P47136 1447 aa14.33□□□□□ -0.12
AMF1YOR378W THO2P53552 1597 aaKnown RBP14.32□□□□□ -0.12
AMF1YOR378W ECM5Q03214 1411 aa14.32□□□□□ -0.12
AMF1YOR378W REV3P14284 1504 aa14.3□□□□□ -0.12
AMF1YOR378W SIN3P22579 1536 aa14.19□□□□□ -0.14
AMF1YOR378W TAF2P23255 1407 aa14.12□□□□□ -0.15
AMF1YOR378W MDS3P53094 1487 aa14.09□□□□□ -0.15
AMF1YOR378W SSK2P53599 1579 aa14.08□□□□□ -0.16
AMF1YOR378W ATG2P53855 1592 aa14.06□□□□□ -0.16
AMF1YOR378W PEP1P32319 1579 aa14.01□□□□□ -0.17
AMF1YOR378W SKI3P17883 1432 aaKnown RBP13.98□□□□□ -0.17
AMF1YOR378W ESP1Q03018 1630 aa13.96□□□□□ -0.17
AMF1YOR378W RSE1Q04693 1361 aaKnown RBP13.92□□□□□ -0.18
AMF1YOR378W MYO2P19524 1574 aaKnown RBP13.89□□□□□ -0.19
AMF1YOR378W YPK9Q12697 1472 aa13.81□□□□□ -0.2
AMF1YOR378W SCC2Q04002 1493 aa13.71□□□□□ -0.21
AMF1YOR378W UFD4P33202 1483 aa13.67□□□□□ -0.22
AMF1YOR378W RPO31P04051 1460 aa13.66□□□□□ -0.22
AMF1YOR378W BPT1P14772 1559 aa13.66□□□□□ -0.22
AMF1YOR378W POL1P13382 1468 aa13.63□□□□□ -0.23
AMF1YOR378W MTC1P47018 478 aaKnown RBP13.54□□□□□ -0.24
AMF1YOR378W STU1P38198 1513 aa13.53□□□□□ -0.24
AMF1YOR378W YCF1P39109 1515 aaKnown RBP13.53□□□□□ -0.24
AMF1YOR378W TOP2P06786 1428 aaKnown RBP13.52□□□□□ -0.24
AMF1YOR378W RKR1Q04781 1562 aa13.52□□□□□ -0.25
AMF1YOR378W YOR1P53049 1477 aa13.45□□□□□ -0.26
AMF1YOR378W TY2B-LR1P0C2J3 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-FP0CX63 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-GR2P0CX64 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-CP25384 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-DR2Q03494 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY1B-DR1Q03855 1755 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-DR3Q07791 1770 aaKnown RBP13.43□□□□□ -0.26
AMF1YOR378W TY2B-OR1Q12113 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-DR1Q12472 1770 aa13.43□□□□□ -0.26
AMF1YOR378W TY2B-OR2Q12501 1770 aa13.43□□□□□ -0.26
AMF1YOR378W SMC4Q12267 1418 aa13.42□□□□□ -0.26
AMF1YOR378W YTA7P40340 1379 aa13.4□□□□□ -0.26
AMF1YOR378W CHD1P32657 1468 aa13.36□□□□□ -0.27
AMF1YOR378W RQC2Q12532 1038 aaKnown RBP13.35□□□□□ -0.27
AMF1YOR378W CDC25P04821 1589 aa13.33□□□□□ -0.27
AMF1YOR378W TY1B-DR3Q99231 1755 aa13.32□□□□□ -0.28
AMF1YOR378W TY2B-BQ12491 1770 aa13.3□□□□□ -0.28
AMF1YOR378W TY1B-BRQ12193 1756 aa13.3□□□□□ -0.28
AMF1YOR378W TY1B-GR3Q12316 1755 aa13.3□□□□□ -0.28
AMF1YOR378W TY1B-ORQ92393 1755 aa13.3□□□□□ -0.28
AMF1YOR378W MYO4P32492 1471 aa13.28□□□□□ -0.28
AMF1YOR378W MMS22Q06164 1454 aa13.28□□□□□ -0.28
AMF1YOR378W PAN1P32521 1480 aa13.27□□□□□ -0.29
AMF1YOR378W TY1B-HO13535 1793 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-DR5P0C2I2 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-DR6P0C2I3 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-LR2P0C2I5 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-LR3P0C2I6 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W TY1B-PR1P0C2I9 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W TY1B-PR2P0C2J0 1756 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-PR3P0C2J1 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W TY1B-JR1P47098 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-ML2Q03434 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W TY1B-ER1Q03612 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-ML1Q04711 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W TY1B-GR2Q12269 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-OLQ12273 1755 aa13.24□□□□□ -0.29
AMF1YOR378W TY1B-PLQ12414 1755 aaKnown RBP13.24□□□□□ -0.29
AMF1YOR378W SPP41P38904 1435 aa13.23□□□□□ -0.29
AMF1YOR378W ESC1Q03661 1658 aaKnown RBP13.16□□□□□ -0.3
AMF1YOR378W DNF1P32660 1571 aa13.16□□□□□ -0.3
AMF1YOR378W TSC11P40061 1430 aa13.14□□□□□ -0.31
AMF1YOR378W TRM732Q03496 1420 aa13.12□□□□□ -0.31
AMF1YOR378W SAS10Q12136 610 aaPredicted RBP13.11□□□□□ -0.31
AMF1YOR378W VTH1P40438 1549 aa13.11□□□□□ -0.31
AMF1YOR378W VTH2P40890 1549 aa13.11□□□□□ -0.31
AMF1YOR378W RPA190P10964 1664 aaKnown RBP13.07□□□□□ -0.32
AMF1YOR378W SNQ2P32568 1501 aaKnown RBP13.07□□□□□ -0.32
AMF1YOR378W STH1P32597 1359 aa13.06□□□□□ -0.32
AMF1YOR378W TAF7Q05021 590 aa13.03□□□□□ -0.32
AMF1YOR378W MET5P47169 1442 aa13.03□□□□□ -0.32
AMF1YOR378W TY1B-JR2P47100 1755 aaKnown RBP13.01□□□□□ -0.33
AMF1YOR378W TY1B-ER2Q03619 1755 aa13.01□□□□□ -0.33
AMF1YOR378W TY1B-MR1Q04214 1755 aa13.01□□□□□ -0.33
AMF1YOR378W TY1B-MR2Q04670 1755 aaKnown RBP13.01□□□□□ -0.33
AMF1YOR378W TY1B-LR1Q12088 1755 aaKnown RBP13.01□□□□□ -0.33
AMF1YOR378W TY1B-NL1Q12112 1755 aa13.01□□□□□ -0.33
AMF1YOR378W TY1B-GR1Q12141 1755 aa13.01□□□□□ -0.33
AMF1YOR378W TY1B-BLQ12490 1755 aa13.01□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms