RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	NUP192	P47054	1683 aa		3.28	□□□□□ -1.88
RSA1	YPL193W	YCR006C	P25350	157 aa		3.28	□□□□□ -1.88
RSA1	YPL193W	TPA1	P40032	644 aa	Known RBP	3.28	□□□□□ -1.88
RSA1	YPL193W	RPN11	P43588	306 aa	Known RBP	3.28	□□□□□ -1.88
RSA1	YPL193W	LYS4	P49367	693 aa	Predicted RBP	3.28	□□□□□ -1.88
RSA1	YPL193W	POS5	Q06892	414 aa		3.28	□□□□□ -1.88
RSA1	YPL193W	APL5	Q08951	932 aa	Known RBP	3.28	□□□□□ -1.88
RSA1	YPL193W	TAH18	Q12181	623 aa		3.28	□□□□□ -1.88
RSA1	YPL193W	DBP10	Q12389	995 aa	Known RBP	3.28	□□□□□ -1.88
RSA1	YPL193W	CDC23	P16522	626 aa		3.27	□□□□□ -1.89
RSA1	YPL193W	COX11	P19516	300 aa	Known RBP	3.27	□□□□□ -1.89
RSA1	YPL193W	SAN1	P22470	610 aa		3.27	□□□□□ -1.89
RSA1	YPL193W	DUG1	P43616	481 aa	Known RBP	3.27	□□□□□ -1.89
RSA1	YPL193W	UBP8	P50102	471 aa		3.27	□□□□□ -1.89
RSA1	YPL193W	ARP9	Q05123	467 aa		3.27	□□□□□ -1.89
RSA1	YPL193W	FRE3	Q08905	711 aa		3.27	□□□□□ -1.89
RSA1	YPL193W	PRP16	P15938	1071 aa	Predicted RBP	3.26	□□□□□ -1.89
RSA1	YPL193W	HNM1	P19807	563 aa		3.26	□□□□□ -1.89
RSA1	YPL193W	PRP45	P28004	379 aa	Predicted RBP	3.26	□□□□□ -1.89
RSA1	YPL193W	HOL1	P53389	586 aa		3.26	□□□□□ -1.89
RSA1	YPL193W	IMP4	P53941	290 aa	Known RBP	3.26	□□□□□ -1.89
RSA1	YPL193W	YNL034W	P53963	612 aa		3.26	□□□□□ -1.89
RSA1	YPL193W	PIG1	Q06216	648 aa		3.26	□□□□□ -1.89
RSA1	YPL193W	YRF1-3	P0CX14	1859 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	YRF1-7	P0CX15	1859 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	YRF1-6	P53819	1859 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	SEC1	P30619	724 aa	Known RBP	3.25	□□□□□ -1.89
RSA1	YPL193W	NPR2	P39923	615 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	DOT5	P40553	215 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	SMA2	Q04658	369 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	YMR254C	Q04838	102 aa		3.25	□□□□□ -1.89
RSA1	YPL193W	COX1	P00401	534 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	CBP1	P07252	654 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	LAC1	P28496	418 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	SWC3	P31376	625 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	POL31	P46957	487 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	NIT2	P47016	307 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	SLD3	P53135	668 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	EAF7	P53911	425 aa	Known RBP	3.24	□□□□□ -1.89
RSA1	YPL193W	CAC2	Q04199	468 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	ECI1	Q05871	280 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	RSA1	Q08932	381 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	YGR161W-C	Q3E744	92 aa		3.24	□□□□□ -1.89
RSA1	YPL193W	YML002W	P0CF17	737 aa		3.23	□□□□□ -1.89
RSA1	YPL193W	PDE1	P22434	369 aa		3.23	□□□□□ -1.89
RSA1	YPL193W	EFM2	P38347	419 aa		3.23	□□□□□ -1.89
RSA1	YPL193W	SSP120	P39931	234 aa	Known RBP	3.23	□□□□□ -1.89
RSA1	YPL193W	ROK1	P45818	564 aa	Predicted RBP	3.23	□□□□□ -1.89
RSA1	YPL193W	CUL3	P53202	744 aa		3.23	□□□□□ -1.89
RSA1	YPL193W	FCP1	Q03254	732 aa		3.23	□□□□□ -1.89
RSA1	YPL193W	RAD9	P14737	1309 aa		3.22	□□□□□ -1.89
RSA1	YPL193W	YER145C-A	A0A023PYF4	145 aa		3.22	□□□□□ -1.89
RSA1	YPL193W	KRE9	P39005	276 aa		3.22	□□□□□ -1.89
RSA1	YPL193W	SWF1	Q04629	336 aa		3.22	□□□□□ -1.89
RSA1	YPL193W	TAF5	P38129	798 aa		3.21	□□□□□ -1.9
RSA1	YPL193W	EXO84	P38261	753 aa		3.21	□□□□□ -1.9
RSA1	YPL193W	FUN12	P39730	1002 aa	Known RBP	3.21	□□□□□ -1.9
RSA1	YPL193W	YJL070C	P40361	888 aa		3.21	□□□□□ -1.9
RSA1	YPL193W	UBX6	P47049	396 aa		3.21	□□□□□ -1.9
RSA1	YPL193W	SMA1	Q02651	245 aa		3.21	□□□□□ -1.9
RSA1	YPL193W	GPA1	P08539	472 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	MGR1	P25573	417 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	RAD24	P32641	659 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	NMD2	P38798	1089 aa	Known RBP	3.2	□□□□□ -1.9
RSA1	YPL193W	IML2	P47031	731 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	ESF2	P53743	316 aa	Known RBP	3.2	□□□□□ -1.9
RSA1	YPL193W	YDR109C	Q04585	715 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	TRI1	Q05024	226 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	PSF3	Q12146	194 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	VPS13	Q07878	3144 aa		3.2	□□□□□ -1.9
RSA1	YPL193W	SNF2	P22082	1703 aa		3.19	□□□□□ -1.9
RSA1	YPL193W	PDA1	P16387	420 aa	Known RBP	3.19	□□□□□ -1.9
RSA1	YPL193W	PRO3	P32263	286 aa	Known RBP	3.19	□□□□□ -1.9
RSA1	YPL193W	HEM12	P32347	362 aa	Predicted RBP	3.19	□□□□□ -1.9
RSA1	YPL193W	SCS2	P40075	244 aa	Known RBP	3.19	□□□□□ -1.9
RSA1	YPL193W	YNL234W	P53857	426 aa		3.19	□□□□□ -1.9
RSA1	YPL193W	VPS64	Q03944	604 aa		3.19	□□□□□ -1.9
RSA1	YPL193W	YBR255C-A	Q3E776	120 aa		3.19	□□□□□ -1.9
RSA1	YPL193W	PSK1	P31374	1356 aa		3.19	□□□□□ -1.9
RSA1	YPL193W	SUI3	P09064	285 aa	Known RBP	3.18	□□□□□ -1.9
RSA1	YPL193W	BAR1	P12630	587 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	PMS1	P14242	873 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	TRS65	P32893	560 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	ATG27	P46989	271 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	YRB30	P53107	440 aa	Predicted RBP	3.18	□□□□□ -1.9
RSA1	YPL193W	YGL081W	P53156	320 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	YGR079W	P53249	370 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	PEX15	Q08215	383 aa		3.18	□□□□□ -1.9
RSA1	YPL193W	TGL1	P34163	548 aa		3.17	□□□□□ -1.9
RSA1	YPL193W	EAF6	P47128	113 aa		3.17	□□□□□ -1.9
RSA1	YPL193W	AIM6	Q07716	390 aa		3.17	□□□□□ -1.9
RSA1	YPL193W	YIL177C	P40434	1758 aa		3.17	□□□□□ -1.9
RSA1	YPL193W	YJL225C	P40889	1758 aa		3.17	□□□□□ -1.9
RSA1	YPL193W	EDE1	P34216	1381 aa		3.16	□□□□□ -1.9
RSA1	YPL193W	ROM2	P51862	1356 aa	Known RBP	3.16	□□□□□ -1.9
RSA1	YPL193W	VAS1	P07806	1104 aa	Known RBP	3.16	□□□□□ -1.9
RSA1	YPL193W	REV1	P12689	985 aa		3.16	□□□□□ -1.9
RSA1	YPL193W	CPR3	P25719	182 aa		3.16	□□□□□ -1.9
RSA1	YPL193W	HES1	P35843	434 aa		3.16	□□□□□ -1.9
RSA1	YPL193W	FPR3	P38911	411 aa	Known RBP	3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms