RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W TLG2Q08144 397 aa3.34□□□□□ -1.87
BUD21YOR078W YPL225WQ08971 146 aaKnown RBP3.34□□□□□ -1.87
BUD21YOR078W RTK1Q12100 620 aaPredicted RBP3.34□□□□□ -1.87
BUD21YOR078W DNF1P32660 1571 aa3.34□□□□□ -1.88
BUD21YOR078W CDC37P06101 506 aaKnown RBP3.33□□□□□ -1.88
BUD21YOR078W THR4P16120 514 aaKnown RBP3.33□□□□□ -1.88
BUD21YOR078W PRP45P28004 379 aaPredicted RBP3.33□□□□□ -1.88
BUD21YOR078W BRF1P29056 596 aa3.33□□□□□ -1.88
BUD21YOR078W MSS51P32335 436 aa3.33□□□□□ -1.88
BUD21YOR078W RRP1P35178 278 aaPredicted RBP3.33□□□□□ -1.88
BUD21YOR078W PET100P38958 111 aa3.33□□□□□ -1.88
BUD21YOR078W EAF5P39995 279 aa3.33□□□□□ -1.88
BUD21YOR078W YPR003CP53394 754 aa3.33□□□□□ -1.88
BUD21YOR078W RCF1Q03713 159 aa3.33□□□□□ -1.88
BUD21YOR078W UBX2Q04228 584 aa3.33□□□□□ -1.88
BUD21YOR078W VMS1Q04311 632 aaKnown RBP3.33□□□□□ -1.88
BUD21YOR078W ARP9Q05123 467 aa3.33□□□□□ -1.88
BUD21YOR078W PDR8Q06149 701 aa3.33□□□□□ -1.88
BUD21YOR078W THI3Q07471 609 aa3.33□□□□□ -1.88
BUD21YOR078W YPR027CQ12079 277 aa3.33□□□□□ -1.88
BUD21YOR078W VPS15P22219 1454 aa3.33□□□□□ -1.88
BUD21YOR078W PDR15Q04182 1529 aaKnown RBP3.33□□□□□ -1.88
BUD21YOR078W PRP16P15938 1071 aaPredicted RBP3.32□□□□□ -1.88
BUD21YOR078W CLN1P20437 546 aa3.32□□□□□ -1.88
BUD21YOR078W PRE2P30656 287 aaKnown RBP3.32□□□□□ -1.88
BUD21YOR078W YME2P32843 850 aa3.32□□□□□ -1.88
BUD21YOR078W MPE1P35728 441 aaKnown RBP3.32□□□□□ -1.88
BUD21YOR078W MRPL10P36520 322 aa3.32□□□□□ -1.88
BUD21YOR078W EFM2P38347 419 aa3.32□□□□□ -1.88
BUD21YOR078W ERC1P38767 581 aa3.32□□□□□ -1.88
BUD21YOR078W MAD2P40958 196 aa3.32□□□□□ -1.88
BUD21YOR078W GSM1P42950 618 aa3.32□□□□□ -1.88
BUD21YOR078W SHE4P51534 789 aa3.32□□□□□ -1.88
BUD21YOR078W YGL081WP53156 320 aa3.32□□□□□ -1.88
BUD21YOR078W HST1P53685 503 aa3.32□□□□□ -1.88
BUD21YOR078W YNR071CP53757 342 aa3.32□□□□□ -1.88
BUD21YOR078W ESBP6P53918 673 aa3.32□□□□□ -1.88
BUD21YOR078W ARO80Q04052 950 aa3.32□□□□□ -1.88
BUD21YOR078W RRB1Q04225 511 aaKnown RBP3.32□□□□□ -1.88
BUD21YOR078W TSR1Q07381 788 aaKnown RBP3.32□□□□□ -1.88
BUD21YOR078W RSA1Q08932 381 aa3.32□□□□□ -1.88
BUD21YOR078W LEA1Q08963 238 aaPredicted RBP3.32□□□□□ -1.88
BUD21YOR078W DIN7Q12086 430 aa3.32□□□□□ -1.88
BUD21YOR078W HOS1Q12214 470 aa3.32□□□□□ -1.88
BUD21YOR078W NKP1Q12493 238 aa3.32□□□□□ -1.88
BUD21YOR078W SMC6Q12749 1114 aa3.32□□□□□ -1.88
BUD21YOR078W YKL068W-AQ3E826 78 aa3.32□□□□□ -1.88
BUD21YOR078W GDB1Q06625 1536 aa3.32□□□□□ -1.88
BUD21YOR078W RKR1Q04781 1562 aa3.32□□□□□ -1.88
BUD21YOR078W TIF3P34167 436 aaKnown RBP3.31□□□□□ -1.88
BUD21YOR078W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
BUD21YOR078W OCT1P35999 772 aa3.31□□□□□ -1.88
BUD21YOR078W PIM1P36775 1133 aa3.31□□□□□ -1.88
BUD21YOR078W NPR3P38742 1146 aa3.31□□□□□ -1.88
BUD21YOR078W YRB1P41920 201 aaKnown RBP3.31□□□□□ -1.88
BUD21YOR078W IST1P53843 298 aaPredicted RBP3.31□□□□□ -1.88
BUD21YOR078W CRZ1P53968 678 aa3.31□□□□□ -1.88
BUD21YOR078W SKY1Q03656 742 aa3.31□□□□□ -1.88
BUD21YOR078W CAC2Q04199 468 aa3.31□□□□□ -1.88
BUD21YOR078W CWC2Q12046 339 aaPredicted RBP3.31□□□□□ -1.88
BUD21YOR078W CFT2Q12102 859 aaPredicted RBP3.31□□□□□ -1.88
BUD21YOR078W ARO1P08566 1588 aaKnown RBP3.3□□□□□ -1.88
BUD21YOR078W TY3B-IQ7LHG5 1498 aaKnown RBP3.3□□□□□ -1.88
BUD21YOR078W CAT8P39113 1433 aa3.3□□□□□ -1.88
BUD21YOR078W AUS1Q08409 1394 aa3.3□□□□□ -1.88
BUD21YOR078W BIK1P11709 440 aa3.3□□□□□ -1.88
BUD21YOR078W DAL5P15365 543 aa3.3□□□□□ -1.88
BUD21YOR078W RAD16P31244 790 aa3.3□□□□□ -1.88
BUD21YOR078W PET309P32522 965 aaPredicted RBP3.3□□□□□ -1.88
BUD21YOR078W RPC37P36121 282 aa3.3□□□□□ -1.88
BUD21YOR078W PMT3P47190 753 aa3.3□□□□□ -1.88
BUD21YOR078W CUL3P53202 744 aa3.3□□□□□ -1.88
BUD21YOR078W BTN2P53286 410 aa3.3□□□□□ -1.88
BUD21YOR078W INP2Q03824 705 aa3.3□□□□□ -1.88
BUD21YOR078W PIG1Q06216 648 aa3.3□□□□□ -1.88
BUD21YOR078W TAH18Q12181 623 aa3.3□□□□□ -1.88
BUD21YOR078W RPO31P04051 1460 aa3.29□□□□□ -1.88
BUD21YOR078W YML133CQ03099 1374 aa3.29□□□□□ -1.88
BUD21YOR078W YLL067CQ07888 1374 aa3.29□□□□□ -1.88
BUD21YOR078W YLL066CQ99208 1374 aa3.29□□□□□ -1.88
BUD21YOR078W SAN1P22470 610 aa3.29□□□□□ -1.88
BUD21YOR078W RPL5P26321 297 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W SPT8P38915 602 aa3.29□□□□□ -1.88
BUD21YOR078W HYR1P40581 163 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W ROK1P45818 564 aaPredicted RBP3.29□□□□□ -1.88
BUD21YOR078W PSP1P50896 841 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W DSL1P53847 754 aa3.29□□□□□ -1.88
BUD21YOR078W YNL247WP53852 767 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W FCP1Q03254 732 aa3.29□□□□□ -1.88
BUD21YOR078W GYL1Q04322 720 aa3.29□□□□□ -1.88
BUD21YOR078W YMR254CQ04838 102 aa3.29□□□□□ -1.88
BUD21YOR078W CRF1Q04930 467 aa3.29□□□□□ -1.88
BUD21YOR078W EIS1Q05050 843 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W ESC1Q03661 1658 aaKnown RBP3.29□□□□□ -1.88
BUD21YOR078W IQG1Q12280 1495 aa3.28□□□□□ -1.88
BUD21YOR078W SAC3P46674 1301 aa3.28□□□□□ -1.88
BUD21YOR078W HNM1P19807 563 aa3.28□□□□□ -1.88
BUD21YOR078W CDC60P26637 1090 aaKnown RBP3.28□□□□□ -1.88
BUD21YOR078W SWC3P31376 625 aa3.28□□□□□ -1.88
BUD21YOR078W HEL1P36113 551 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms