RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	SYN8	P31377	255 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	MGM1	P32266	881 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	CCL1	P37366	393 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	ERC1	P38767	581 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	MSE1	P48525	536 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	MFM1	Q02783	413 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	PRP42	Q03776	544 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	BUD22	Q04347	519 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	RQC1	Q05468	723 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	YDR341C	Q05506	607 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	MRI1	Q06489	411 aa	Known RBP	4.86	□□□□□ -1.63
BDP1	YNL039W	YDL086W	Q07505	273 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	MLH3	Q12083	715 aa		4.86	□□□□□ -1.63
BDP1	YNL039W	RPS13	P05756	151 aa	Known RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	ARD1	P07347	238 aa	Predicted RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	THR1	P17423	357 aa	Known RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	PAP1	P29468	568 aa	Known RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	HIS7	P33734	552 aa	Known RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	MEP1	P40260	492 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	SAE2	P46946	345 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	CTK2	P46962	323 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	YJL163C	P46996	555 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	VID30	P53076	958 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	RIA1	P53893	1110 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	YAT1	P80235	687 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	RPS15	Q01855	142 aa	Known RBP	4.85	□□□□□ -1.63
BDP1	YNL039W	CRN1	Q06440	651 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	BAG7	Q12128	409 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	AVL9	Q12500	764 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	ISN1	Q99312	450 aa		4.85	□□□□□ -1.63
BDP1	YNL039W	CPR2	P23285	205 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	VMA16	P23968	213 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
BDP1	YNL039W	LST4	P34239	828 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	CMC1	P36064	111 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	YHR097C	P38809	366 aa	Known RBP	4.84	□□□□□ -1.63
BDP1	YNL039W	FUN12	P39730	1002 aa	Known RBP	4.84	□□□□□ -1.63
BDP1	YNL039W	AFG3	P39925	761 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	FMP52	P40008	231 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	TCB2	P48231	1178 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	CTR1	P49573	406 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	HOS2	P53096	452 aa	Predicted RBP	4.84	□□□□□ -1.63
BDP1	YNL039W	YDR239C	Q03780	787 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	ARX1	Q03862	593 aa	Known RBP	4.84	□□□□□ -1.63
BDP1	YNL039W	ROY1	Q04847	553 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	FMP45	Q07651	309 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	YPL216W	Q08964	1102 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	NFI1	Q12216	726 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	SKS1	Q12505	502 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	DFG16	Q99234	619 aa		4.84	□□□□□ -1.63
BDP1	YNL039W	STF1	P01098	86 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	GAL80	P04387	435 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	EST1	P17214	699 aa	Predicted RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	TRX1	P22217	103 aa	Known RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	SWP82	P43554	623 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	TWF1	P53250	332 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	DIP5	P53388	608 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	SNF12	P53628	566 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	BUD17	P53727	317 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	CTF4	Q01454	927 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	PRP3	Q03338	469 aa	Predicted RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	SPE3	Q12074	293 aa	Known RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	GPM3	Q12326	303 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	HSP42	Q12329	375 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	FRE6	Q12473	712 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	AFI1	Q99222	893 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	YSP3	P25036	478 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	SIP1	P32578	815 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	PMT1	P33775	817 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	MAF1	P41910	395 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	PET130	P47065	347 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	MSY1	P48527	492 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	YGR151C	P53287	111 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	DCP2	P53550	970 aa	Known RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	EOS1	P53938	366 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	BOP3	P53958	396 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	RPA49	Q01080	415 aa	Predicted RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	YPL107W	Q02873	248 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	UFO1	Q04511	668 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	RSF1	Q05043	376 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	SWA2	Q06677	668 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	LUC7	Q07508	261 aa	Predicted RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	FMP40	Q08968	688 aa	Predicted RBP	4.83	□□□□□ -1.64
BDP1	YNL039W	USV1	Q12132	391 aa		4.83	□□□□□ -1.64
BDP1	YNL039W	YPK1	P12688	680 aa	Known RBP	4.82	□□□□□ -1.64
BDP1	YNL039W	CLC1	P17891	233 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	CNE1	P27825	502 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	ERV1	P27882	189 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	MRE11	P32829	692 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	LOT5	P34234	306 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	HES1	P35843	434 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	APL3	P38065	1025 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	MAM1	P40065	302 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	BUL1	P48524	976 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	OCA1	P50946	238 aa	Predicted RBP	4.82	□□□□□ -1.64
BDP1	YNL039W	YIP4	P53093	235 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	CUL3	P53202	744 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	YDL242W	Q07746	117 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	TGS1	Q12052	315 aa		4.82	□□□□□ -1.64
BDP1	YNL039W	COX1	P00401	534 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms