Protein–RNA interactions for Protein: P27825

CNE1, Calnexin homolog, yeastyeast

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CNE1P27825 NSR1YGR159C 1245 nt17.76■□□□□ 0.43
CNE1P27825 YML009W-BYML009W-B 477 nt17.53■□□□□ 0.4
CNE1P27825 NOP1YDL014W 984 nt16.88■□□□□ 0.29
CNE1P27825 MDJ1YFL016C 1536 nt16.14■□□□□ 0.17
CNE1P27825 YKL036CYKL036C 393 nt15.22■□□□□ 0.03
CNE1P27825 YJL027CYJL027C 417 nt14.85□□□□□ -0.03
CNE1P27825 SRX1YKL086W 384 nt14.76□□□□□ -0.05
CNE1P27825 Q0297Q0297 156 nt14.67□□□□□ -0.06
CNE1P27825 DBP2YNL112W 1641 nt14.14□□□□□ -0.15
CNE1P27825 YCR051WYCR051W 669 nt13.96□□□□□ -0.17
CNE1P27825 YBR190WYBR190W 312 nt13.86□□□□□ -0.19
CNE1P27825 SCS3YGL126W 1143 nt13.75□□□□□ -0.21
CNE1P27825 TRN1tP(UGG)A 72 nt13.58□□□□□ -0.24
CNE1P27825 SUF9tP(UGG)F 72 nt13.58□□□□□ -0.24
CNE1P27825 SUF8tP(UGG)H 72 nt13.58□□□□□ -0.24
CNE1P27825 tP(UGG)LtP(UGG)L 72 nt13.58□□□□□ -0.24
CNE1P27825 SUF7tP(UGG)M 72 nt13.58□□□□□ -0.24
CNE1P27825 tP(UGG)N1tP(UGG)N1 72 nt13.58□□□□□ -0.24
CNE1P27825 tP(UGG)N2tP(UGG)N2 72 nt13.58□□□□□ -0.24
CNE1P27825 tP(UGG)O1tP(UGG)O1 72 nt13.58□□□□□ -0.24
CNE1P27825 SUF11tP(UGG)O2 72 nt13.58□□□□□ -0.24
CNE1P27825 RTC3YHR087W 336 nt13.51□□□□□ -0.25
CNE1P27825 CCC1YLR220W 969 nt13.42□□□□□ -0.26
CNE1P27825 YOL085CYOL085C 342 nt13.21□□□□□ -0.29
CNE1P27825 RVS167YDR388W 1449 nt13.18□□□□□ -0.3
CNE1P27825 RPP1BYDL130W 321 nt13.16□□□□□ -0.3
CNE1P27825 SCJ1YMR214W 1134 nt13.06□□□□□ -0.32
CNE1P27825 PKP1YIL042C 1185 nt13.05□□□□□ -0.32
CNE1P27825 SSA3YBL075C 1950 nt12.98□□□□□ -0.33
CNE1P27825 PUT4YOR348C 1884 nt12.9□□□□□ -0.34
CNE1P27825 tP(UGG)O3tP(UGG)O3 72 nt12.71□□□□□ -0.37
CNE1P27825 SHR5YOL110W 714 nt12.65□□□□□ -0.38
CNE1P27825 PET122YER153C 765 nt12.61□□□□□ -0.39
CNE1P27825 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
CNE1P27825 URN1YPR152C 1398 nt12.52□□□□□ -0.41
CNE1P27825 POA1YBR022W 534 nt12.45□□□□□ -0.42
CNE1P27825 SAH1YER043C 1350 nt12.44□□□□□ -0.42
CNE1P27825 OPI9YLR338W 858 nt12.43□□□□□ -0.42
CNE1P27825 DEP1YAL013W 1218 nt12.4□□□□□ -0.42
CNE1P27825 YHR049C-AYHR049C-A 297 nt12.37□□□□□ -0.43
CNE1P27825 SCR1SCR1 522 nt12.37□□□□□ -0.43
CNE1P27825 YDJ1YNL064C 1230 nt12.3□□□□□ -0.44
CNE1P27825 BSC6YOL137W 1494 nt12.26□□□□□ -0.45
CNE1P27825 RPN10YHR200W 807 nt12.24□□□□□ -0.45
CNE1P27825 RRN5YLR141W 1092 nt12.21□□□□□ -0.45
CNE1P27825 ATS1YAL020C 1002 nt12.2□□□□□ -0.46
CNE1P27825 YNL208WYNL208W 600 nt12.17□□□□□ -0.46
CNE1P27825 GAR1YHR089C 618 nt12.08□□□□□ -0.48
CNE1P27825 PUN1YLR414C 792 nt12.06□□□□□ -0.48
CNE1P27825 BUD23YCR047C 828 nt12.04□□□□□ -0.48
CNE1P27825 SPT5YML010W 3192 nt12□□□□□ -0.49
CNE1P27825 PTC2YER089C 1395 nt11.98□□□□□ -0.49
CNE1P27825 YER088W-BYER088W-B 147 nt11.97□□□□□ -0.49
CNE1P27825 YJR018WYJR018W 363 nt11.92□□□□□ -0.5
CNE1P27825 NAB2YGL122C 1578 nt11.88□□□□□ -0.51
CNE1P27825 RSB1YOR049C 1065 nt11.83□□□□□ -0.52
CNE1P27825 Q0182Q0182 405 nt11.78□□□□□ -0.52
CNE1P27825 SSA4YER103W 1929 nt11.74□□□□□ -0.53
CNE1P27825 TIR1YER011W 765 nt11.7□□□□□ -0.54
CNE1P27825 FIS1YIL065C 468 nt11.69□□□□□ -0.54
CNE1P27825 YJR120WYJR120W 351 nt11.68□□□□□ -0.54
CNE1P27825 DAL1YIR027C 1383 nt11.66□□□□□ -0.54
CNE1P27825 SSA1YAL005C 1929 nt11.64□□□□□ -0.55
CNE1P27825 FPR4YLR449W 1179 nt11.6□□□□□ -0.55
CNE1P27825 RPP2BYDR382W 333 nt11.57□□□□□ -0.56
CNE1P27825 MEP2YNL142W 1500 nt11.55□□□□□ -0.56
CNE1P27825 INM2YDR287W 879 nt11.55□□□□□ -0.56
CNE1P27825 PHO4YFR034C 939 nt11.55□□□□□ -0.56
CNE1P27825 YPS1YLR120C 1710 nt11.46□□□□□ -0.58
CNE1P27825 MOT3YMR070W 1473 nt11.39□□□□□ -0.59
CNE1P27825 SRB2YHR041C 633 nt11.38□□□□□ -0.59
CNE1P27825 YBL100CYBL100C 315 nt11.38□□□□□ -0.59
CNE1P27825 PST2YDR032C 597 nt11.37□□□□□ -0.59
CNE1P27825 DCW1YKL046C 1350 nt11.36□□□□□ -0.59
CNE1P27825 YHR165W-AYHR165W-A 312 nt11.35□□□□□ -0.59
CNE1P27825 BDF1YLR399C 2061 nt11.32□□□□□ -0.6
CNE1P27825 YDR095CYDR095C 411 nt11.32□□□□□ -0.6
CNE1P27825 BDH2YAL061W 1254 nt11.28□□□□□ -0.6
CNE1P27825 FUN26YAL022C 1554 nt11.23□□□□□ -0.61
CNE1P27825 EMI2YDR516C 1503 nt11.2□□□□□ -0.62
CNE1P27825 TAT1YBR069C 1860 nt11.17□□□□□ -0.62
CNE1P27825 YMR090WYMR090W 684 nt11.14□□□□□ -0.63
CNE1P27825 ALF1YNL148C 765 nt11.14□□□□□ -0.63
CNE1P27825 TRM9YML014W 840 nt11.13□□□□□ -0.63
CNE1P27825 YBR220CYBR220C 1683 nt11.13□□□□□ -0.63
CNE1P27825 WWM1YFL010C 636 nt11.12□□□□□ -0.63
CNE1P27825 PTP1YDL230W 1008 nt11.11□□□□□ -0.63
CNE1P27825 RPP2AYOL039W 321 nt11.11□□□□□ -0.63
CNE1P27825 YDL221WYDL221W 552 nt11.09□□□□□ -0.63
CNE1P27825 CAC2YML102W 1407 nt11.09□□□□□ -0.63
CNE1P27825 LSM3YLR438C-A 270 nt11.07□□□□□ -0.64
CNE1P27825 CCT6YDR188W 1641 nt11.06□□□□□ -0.64
CNE1P27825 SDH1YKL148C 1923 nt11.03□□□□□ -0.64
CNE1P27825 SIS1YNL007C 1059 nt11□□□□□ -0.65
CNE1P27825 SUF2tP(AGG)C 72 nt10.98□□□□□ -0.65
CNE1P27825 SUF10tP(AGG)N 72 nt10.98□□□□□ -0.65
CNE1P27825 SHU1YHL006C 453 nt10.98□□□□□ -0.65
CNE1P27825 YFL021C-AYFL021C-A 855 nt10.95□□□□□ -0.66
CNE1P27825 YGR021WYGR021W 873 nt10.94□□□□□ -0.66
CNE1P27825 IRC15YPL017C 1500 nt10.93□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms