RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C HOS1Q12214 470 aa1.67□□□□□ -2.14
VPS55YJR044C RRI2Q12348 645 aa1.67□□□□□ -2.14
VPS55YJR044C RTP1Q12751 981 aa1.67□□□□□ -2.14
VPS55YJR044C FOB1O13329 566 aa1.66□□□□□ -2.14
VPS55YJR044C ILV2P07342 687 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C VAS1P07806 1104 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C MSS18P08593 268 aa1.66□□□□□ -2.14
VPS55YJR044C HSC82P15108 705 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C RPS7AP26786 190 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C SWC3P31376 625 aa1.66□□□□□ -2.14
VPS55YJR044C XRS2P33301 854 aa1.66□□□□□ -2.14
VPS55YJR044C CNS1P33313 385 aa1.66□□□□□ -2.14
VPS55YJR044C TGL1P34163 548 aa1.66□□□□□ -2.14
VPS55YJR044C TEF4P36008 412 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C RRN3P36070 627 aa1.66□□□□□ -2.14
VPS55YJR044C EFM2P38347 419 aa1.66□□□□□ -2.14
VPS55YJR044C CBK1P53894 756 aa1.66□□□□□ -2.14
VPS55YJR044C SVL3Q03088 825 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C TRS31Q03337 283 aa1.66□□□□□ -2.14
VPS55YJR044C ARP9Q05123 467 aa1.66□□□□□ -2.14
VPS55YJR044C YDR056CQ12025 205 aa1.66□□□□□ -2.14
VPS55YJR044C DBP10Q12389 995 aaKnown RBP1.66□□□□□ -2.14
VPS55YJR044C ARP7Q12406 477 aa1.66□□□□□ -2.14
VPS55YJR044C CTT1P06115 562 aa1.65□□□□□ -2.15
VPS55YJR044C YML002WP0CF17 737 aa1.65□□□□□ -2.15
VPS55YJR044C MRP7P12687 371 aa1.65□□□□□ -2.15
VPS55YJR044C POL3P15436 1097 aa1.65□□□□□ -2.15
VPS55YJR044C HNM1P19807 563 aa1.65□□□□□ -2.15
VPS55YJR044C PRE8P23639 250 aa1.65□□□□□ -2.15
VPS55YJR044C CLB4P24871 460 aa1.65□□□□□ -2.15
VPS55YJR044C MSS51P32335 436 aa1.65□□□□□ -2.15
VPS55YJR044C TIF3P34167 436 aaKnown RBP1.65□□□□□ -2.15
VPS55YJR044C PEX5P35056 612 aa1.65□□□□□ -2.15
VPS55YJR044C PCA1P38360 1216 aa1.65□□□□□ -2.15
VPS55YJR044C LNP1P38878 278 aa1.65□□□□□ -2.15
VPS55YJR044C YEL068CP39977 110 aa1.65□□□□□ -2.15
VPS55YJR044C SCS2P40075 244 aaKnown RBP1.65□□□□□ -2.15
VPS55YJR044C VTC2P43585 828 aa1.65□□□□□ -2.15
VPS55YJR044C MAD3P47074 515 aa1.65□□□□□ -2.15
VPS55YJR044C NPA3P47122 385 aa1.65□□□□□ -2.15
VPS55YJR044C PSP1P50896 841 aaKnown RBP1.65□□□□□ -2.15
VPS55YJR044C CUL3P53202 744 aa1.65□□□□□ -2.15
VPS55YJR044C EAF7P53911 425 aaKnown RBP1.65□□□□□ -2.15
VPS55YJR044C ERO1Q03103 563 aa1.65□□□□□ -2.15
VPS55YJR044C PDR8Q06149 701 aa1.65□□□□□ -2.15
VPS55YJR044C THI3Q07471 609 aa1.65□□□□□ -2.15
VPS55YJR044C LEA1Q08963 238 aaPredicted RBP1.65□□□□□ -2.15
VPS55YJR044C HUA2Q12134 243 aa1.65□□□□□ -2.15
VPS55YJR044C TAH18Q12181 623 aa1.65□□□□□ -2.15
VPS55YJR044C YOL087CQ99247 1116 aa1.65□□□□□ -2.15
VPS55YJR044C TPK1P06244 397 aa1.64□□□□□ -2.15
VPS55YJR044C CDC31P06704 161 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C PTC6P25646 442 aa1.64□□□□□ -2.15
VPS55YJR044C DBF4P32325 704 aa1.64□□□□□ -2.15
VPS55YJR044C GCD7P32502 381 aaPredicted RBP1.64□□□□□ -2.15
VPS55YJR044C SWI3P32591 825 aa1.64□□□□□ -2.15
VPS55YJR044C NUP120P35729 1037 aa1.64□□□□□ -2.15
VPS55YJR044C SWD1P39706 426 aa1.64□□□□□ -2.15
VPS55YJR044C SSP120P39931 234 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C TPA1P40032 644 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C VFA1P40080 203 aa1.64□□□□□ -2.15
VPS55YJR044C IMA5P40884 581 aa1.64□□□□□ -2.15
VPS55YJR044C POL31P46957 487 aa1.64□□□□□ -2.15
VPS55YJR044C ZAP1P47043 880 aa1.64□□□□□ -2.15
VPS55YJR044C RBG2P53295 368 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C MEP3P53390 489 aa1.64□□□□□ -2.15
VPS55YJR044C MOT3P54785 490 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C CEG1Q01159 459 aaPredicted RBP1.64□□□□□ -2.15
VPS55YJR044C RPT6Q01939 405 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C ATG21Q02887 496 aa1.64□□□□□ -2.15
VPS55YJR044C TRS130Q03660 1102 aa1.64□□□□□ -2.15
VPS55YJR044C YMR254CQ04838 102 aa1.64□□□□□ -2.15
VPS55YJR044C CSR1Q06705 408 aaKnown RBP1.64□□□□□ -2.15
VPS55YJR044C TLG2Q08144 397 aa1.64□□□□□ -2.15
VPS55YJR044C YPL191CQ08930 360 aa1.64□□□□□ -2.15
VPS55YJR044C NBP2Q12163 236 aa1.64□□□□□ -2.15
VPS55YJR044C MED1Q12321 566 aa1.64□□□□□ -2.15
VPS55YJR044C SKM1Q12469 655 aa1.64□□□□□ -2.15
VPS55YJR044C HSH49Q99181 213 aaPredicted RBP1.64□□□□□ -2.15
VPS55YJR044C YLR302CO13544 120 aa1.63□□□□□ -2.15
VPS55YJR044C ADH4P10127 382 aa1.63□□□□□ -2.15
VPS55YJR044C PDA1P16387 420 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C AAC3P18238 307 aa1.63□□□□□ -2.15
VPS55YJR044C OPI1P21957 404 aa1.63□□□□□ -2.15
VPS55YJR044C MCM3P24279 971 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C CPR3P25719 182 aa1.63□□□□□ -2.15
VPS55YJR044C PEP3P27801 918 aa1.63□□□□□ -2.15
VPS55YJR044C PAH1P32567 862 aa1.63□□□□□ -2.15
VPS55YJR044C YKL050CP35736 922 aa1.63□□□□□ -2.15
VPS55YJR044C OCT1P35999 772 aa1.63□□□□□ -2.15
VPS55YJR044C MUD2P36084 527 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C RPF2P36160 344 aaKnown RBP1.63□□□□□ -2.15
VPS55YJR044C MRPL4P36517 319 aa1.63□□□□□ -2.15
VPS55YJR044C KTR3P38130 404 aaPredicted RBP1.63□□□□□ -2.15
VPS55YJR044C YBL029WP38201 376 aa1.63□□□□□ -2.15
VPS55YJR044C YHR218WP38899 603 aa1.63□□□□□ -2.15
VPS55YJR044C YJL070CP40361 888 aa1.63□□□□□ -2.15
VPS55YJR044C RIC1P40395 1056 aa1.63□□□□□ -2.15
VPS55YJR044C CAB2P40506 365 aa1.63□□□□□ -2.15
VPS55YJR044C LYS14P40971 790 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms