RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	MRD1	Q06106	887 aa	Known RBP	4.97	□□□□□ -1.61
NUP42	YDR192C	FAS2	P19097	1887 aa	Known RBP	4.96	□□□□□ -1.61
NUP42	YDR192C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
NUP42	YDR192C	KGD2	P19262	463 aa	Predicted RBP	4.96	□□□□□ -1.62
NUP42	YDR192C	ROX1	P25042	368 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	SWI4	P25302	1093 aa	Known RBP	4.96	□□□□□ -1.62
NUP42	YDR192C	BEM3	P32873	1128 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	SWE1	P32944	819 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	YMC2	P38087	329 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	RTS1	P38903	757 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	OPT1	P40897	799 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	CTF18	P49956	741 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	CPR8	P53728	308 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	PRP42	Q03776	544 aa	Known RBP	4.96	□□□□□ -1.62
NUP42	YDR192C	IRC10	Q08118	586 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	YBR255C-A	Q3E776	120 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	YER175W-A	Q8TGU4	54 aa		4.96	□□□□□ -1.62
NUP42	YDR192C	CPA2	P03965	1118 aa	Known RBP	4.95	□□□□□ -1.62
NUP42	YDR192C	SLC1	P33333	303 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	YBR138C	P38277	524 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	ARB1	P40024	610 aa	Known RBP	4.95	□□□□□ -1.62
NUP42	YDR192C	YIL166C	P40445	542 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	VPS20	Q04272	221 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	INM2	Q05533	292 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	NEW1	Q08972	1196 aa	Known RBP	4.95	□□□□□ -1.62
NUP42	YDR192C	CEX1	Q12453	761 aa		4.95	□□□□□ -1.62
NUP42	YDR192C	YMR084W	A2P2R3	262 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	MATALPHA2	P0CY08	210 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	HMLALPHA2	P0CY09	210 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	IMP2'	P32351	346 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	TEF4	P36008	412 aa	Known RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	RRN3	P36070	627 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	KTR3	P38130	404 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	MIT1	P40002	666 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	TFG2	P41896	400 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	MRK1	P50873	501 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	VPS73	P53142	486 aa	Known RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	PIL1	P53252	339 aa	Known RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	RPT4	P53549	437 aa	Known RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	RTC4	P53850	401 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	ATG23	Q06671	453 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	ICL2	Q12031	575 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	RRG1	Q12167	365 aa	Predicted RBP	4.94	□□□□□ -1.62
NUP42	YDR192C	NBL1	Q3E7Y6	73 aa		4.94	□□□□□ -1.62
NUP42	YDR192C	RPL22A	P05749	121 aa	Known RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	TPK1	P06244	397 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	YPK1	P12688	680 aa	Known RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	SPO16	P17122	198 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	PRX1	P34227	261 aa	Known RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	BMH2	P34730	273 aa	Known RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	PTK1	P36002	662 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	SHC1	P39000	512 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	ZAP1	P47043	880 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	YGL117W	P53133	265 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	PIB2	P53191	635 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	APM1	Q00776	475 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	IRC4	Q03036	179 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	MTG1	Q03151	367 aa	Predicted RBP	4.93	□□□□□ -1.62
NUP42	YDR192C	GTB1	Q04924	702 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	PCL8	Q08966	492 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	SUL2	Q12325	893 aa		4.93	□□□□□ -1.62
NUP42	YDR192C	CHO2	P05374	869 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	RNR3	P21672	869 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	SPO11	P23179	398 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	LCB1	P25045	558 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	MRPL9	P31334	269 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	SMY1	P32364	656 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	UGP1	P32861	499 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	CNS1	P33313	385 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	YPT10	P38146	199 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	YEL020C	P39994	560 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	YMR147W	P40218	223 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	COG2	P53271	262 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	TMA64	Q04600	565 aa	Known RBP	4.92	□□□□□ -1.62
NUP42	YDR192C	VID22	Q05934	901 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	VAM6	Q07468	1049 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	YPL150W	Q12152	901 aa		4.92	□□□□□ -1.62
NUP42	YDR192C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
NUP42	YDR192C	SAT4	P25333	603 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	SIP1	P32578	815 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	RPF2	P36160	344 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	TDP1	P38319	544 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	TOM71	P38825	639 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	SPL2	P38839	148 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	VPS8	P39702	1274 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	VID27	P40157	782 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	YIL161W	P40449	235 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	DJP1	P40564	432 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	IST3	P40565	148 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	QRI1	P43123	477 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	ASN1	P49089	572 aa	Known RBP	4.91	□□□□□ -1.62
NUP42	YDR192C	YNL058C	P53947	316 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	AAT1	Q01802	451 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	TFC6	Q06339	672 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	NBP2	Q12163	236 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	RAD61	Q99359	647 aa		4.91	□□□□□ -1.62
NUP42	YDR192C	HSP82	P02829	709 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	RPL7A	P05737	244 aa	Known RBP	4.9	□□□□□ -1.63
NUP42	YDR192C	STE12	P13574	688 aa		4.9	□□□□□ -1.63
NUP42	YDR192C	COQ1	P18900	473 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 180.7 ms