RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	JNM1	P36224	373 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	IFA38	P38286	347 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	IMD2	P38697	523 aa	Known RBP	3.89	□□□□□ -1.79
SWD2	YKL018W	STB2	P46679	850 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	BNA1	P47096	177 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	IMD3	P50095	523 aa	Known RBP	3.89	□□□□□ -1.79
SWD2	YKL018W	TRS31	Q03337	283 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	ENT1	Q12518	454 aa		3.89	□□□□□ -1.79
SWD2	YKL018W	ILV2	P07342	687 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	YCR061W	P25639	631 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	FRD1	P32614	470 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	CNS1	P33313	385 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	MFT1	P33441	392 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	RPF2	P36160	344 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	NPR3	P38742	1146 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	FSH1	P38777	243 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	ARO9	P38840	513 aa	Predicted RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	AXL2	P38928	823 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	NDE1	P40215	560 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	POL31	P46957	487 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	CTF18	P49956	741 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	ATG21	Q02887	496 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	TSR2	Q06672	205 aa	Known RBP	3.88	□□□□□ -1.79
SWD2	YKL018W	LCB4	Q12246	624 aa		3.88	□□□□□ -1.79
SWD2	YKL018W	TPK1	P06244	397 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	ARP2	P32381	391 aa	Known RBP	3.87	□□□□□ -1.79
SWD2	YKL018W	KES1	P35844	434 aa	Known RBP	3.87	□□□□□ -1.79
SWD2	YKL018W	YEL068C	P39977	110 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	YIR016W	P40572	265 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	CIN1	P40987	1014 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	RPS0B	P46654	252 aa	Known RBP	3.87	□□□□□ -1.79
SWD2	YKL018W	IMA1	P53051	589 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	ESF2	P53743	316 aa	Known RBP	3.87	□□□□□ -1.79
SWD2	YKL018W	CBK1	P53894	756 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	TDA9	Q04545	1251 aa		3.87	□□□□□ -1.79
SWD2	YKL018W	SAN1	P22470	610 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	MAK32	P23060	363 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	YUR1	P26725	428 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	MUD2	P36084	527 aa	Known RBP	3.86	□□□□□ -1.79
SWD2	YKL018W	YER010C	P40011	234 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	RRT6	P53117	311 aa	Predicted RBP	3.86	□□□□□ -1.79
SWD2	YKL018W	TRM8	Q12009	286 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	COX17	Q12287	69 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	RTP1	Q12751	981 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	INO80	P53115	1489 aa		3.86	□□□□□ -1.79
SWD2	YKL018W	KGD2	P19262	463 aa	Predicted RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	PRP45	P28004	379 aa	Predicted RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	MSS51	P32335	436 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	IMP2'	P32351	346 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	GCD7	P32502	381 aa	Predicted RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	PAH1	P32567	862 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	PXL1	P36166	706 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	VBA2	P38358	474 aa	Known RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	VPS8	P39702	1274 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	ARB1	P40024	610 aa	Known RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	DPH1	P40487	425 aa	Known RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	ZAP1	P47043	880 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	LSC1	P53598	329 aa	Known RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	YAT1	P80235	687 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	YPL191C	Q08930	360 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	ICL2	Q12031	575 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	LYS21	Q12122	440 aa	Known RBP	3.85	□□□□□ -1.79
SWD2	YKL018W	MED1	Q12321	566 aa		3.85	□□□□□ -1.79
SWD2	YKL018W	PET122	P10355	254 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	AAC3	P18238	307 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	PDE1	P22434	369 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	RIC1	P40395	1056 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	MEP2	P41948	499 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	ORC5	P50874	479 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	YPL108W	Q02872	168 aa	Predicted RBP	3.84	□□□□□ -1.79
SWD2	YKL018W	GIR2	Q03768	265 aa	Predicted RBP	3.84	□□□□□ -1.79
SWD2	YKL018W	SNO4	Q04902	237 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	TFC6	Q06339	672 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	RAD34	Q06665	692 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	HSP33	Q08914	237 aa	Known RBP	3.84	□□□□□ -1.79
SWD2	YKL018W	HSP32	Q08992	237 aa		3.84	□□□□□ -1.79
SWD2	YKL018W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
SWD2	YKL018W	YLR302C	O13544	120 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	SES1	P07284	462 aa	Known RBP	3.83	□□□□□ -1.8
SWD2	YKL018W	FUM1	P08417	488 aa	Known RBP	3.83	□□□□□ -1.8
SWD2	YKL018W	YER190C-B	P0CX94	160 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	YEL077W-A	P0CX95	160 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	YGR296C-B	P0CX96	160 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	YPL283W-B	P0CX97	160 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	YPR204C-A	P0CX98	160 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	NUP120	P35729	1037 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	NOP16	P40007	231 aa	Known RBP	3.83	□□□□□ -1.8
SWD2	YKL018W	SKP2	P42843	763 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	MDV1	P47025	714 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	SRB7	P47822	140 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	PSP1	P50896	841 aa	Known RBP	3.83	□□□□□ -1.8
SWD2	YKL018W	COG1	P53079	417 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	YNL144C	P53907	740 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	ECM22	Q05958	814 aa	Predicted RBP	3.83	□□□□□ -1.8
SWD2	YKL018W	SNA4	Q07549	140 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	AIM6	Q07716	390 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	PFA4	Q12006	378 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	Q0010	Q9ZZX9	128 aa		3.83	□□□□□ -1.8
SWD2	YKL018W	CDC31	P06704	161 aa	Known RBP	3.82	□□□□□ -1.8
SWD2	YKL018W	BIK1	P11709	440 aa		3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms