RNA–Protein interactions for RNA: YDR329C

PEX3, Transcript of Peroxisomal membrane protein (PMP), yeastyeast

Gene PEX3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX3YDR329C PUS2P53167 370 aa6.63□□□□□ -1.35
PEX3YDR329C CDC55Q00362 526 aa6.63□□□□□ -1.35
PEX3YDR329C MZM1Q03429 123 aaPredicted RBP6.63□□□□□ -1.35
PEX3YDR329C TIF35Q04067 274 aaKnown RBP6.63□□□□□ -1.35
PEX3YDR329C FAR8Q05040 523 aa6.63□□□□□ -1.35
PEX3YDR329C PNP1Q05788 311 aa6.63□□□□□ -1.35
PEX3YDR329C VPS5Q92331 675 aa6.63□□□□□ -1.35
PEX3YDR329C CMD1P06787 147 aaKnown RBP6.62□□□□□ -1.35
PEX3YDR329C PYC1P11154 1178 aaKnown RBP6.62□□□□□ -1.35
PEX3YDR329C RNA1P11745 407 aaKnown RBP6.62□□□□□ -1.35
PEX3YDR329C CBF1P17106 351 aa6.62□□□□□ -1.35
PEX3YDR329C KAR4P25583 335 aa6.62□□□□□ -1.35
PEX3YDR329C MGT1P26188 188 aa6.62□□□□□ -1.35
PEX3YDR329C GPI10P30777 616 aa6.62□□□□□ -1.35
PEX3YDR329C DEF1P35732 738 aaKnown RBP6.62□□□□□ -1.35
PEX3YDR329C YPT35P38815 214 aaKnown RBP6.62□□□□□ -1.35
PEX3YDR329C SPC97P38863 823 aa6.62□□□□□ -1.35
PEX3YDR329C SAE2P46946 345 aa6.62□□□□□ -1.35
PEX3YDR329C YNL040WP53960 456 aaPredicted RBP6.62□□□□□ -1.35
PEX3YDR329C KTR5P53966 522 aaPredicted RBP6.62□□□□□ -1.35
PEX3YDR329C HDA3Q06623 655 aa6.62□□□□□ -1.35
PEX3YDR329C YDL121CQ07541 149 aa6.62□□□□□ -1.35
PEX3YDR329C ACM1Q08981 209 aa6.62□□□□□ -1.35
PEX3YDR329C FAP7Q12055 197 aaPredicted RBP6.62□□□□□ -1.35
PEX3YDR329C YOL087CQ99247 1116 aa6.62□□□□□ -1.35
PEX3YDR329C ILS1P09436 1072 aaKnown RBP6.61□□□□□ -1.35
PEX3YDR329C MTF1P14908 341 aaKnown RBP6.61□□□□□ -1.35
PEX3YDR329C MEI4P29467 408 aa6.61□□□□□ -1.35
PEX3YDR329C NIP1P32497 812 aaKnown RBP6.61□□□□□ -1.35
PEX3YDR329C SET3P36124 751 aa6.61□□□□□ -1.35
PEX3YDR329C DIA4P38705 446 aaPredicted RBP6.61□□□□□ -1.35
PEX3YDR329C LYS9P38999 446 aa6.61□□□□□ -1.35
PEX3YDR329C KHA1P40309 873 aa6.61□□□□□ -1.35
PEX3YDR329C BTT1P40314 149 aaPredicted RBP6.61□□□□□ -1.35
PEX3YDR329C HOS4P40480 1083 aa6.61□□□□□ -1.35
PEX3YDR329C YIL054WP40524 105 aa6.61□□□□□ -1.35
PEX3YDR329C CHS6P40955 746 aa6.61□□□□□ -1.35
PEX3YDR329C ZIP2P53061 704 aa6.61□□□□□ -1.35
PEX3YDR329C ARO80Q04052 950 aa6.61□□□□□ -1.35
PEX3YDR329C SPC24Q04477 213 aa6.61□□□□□ -1.35
PEX3YDR329C TAF9Q05027 157 aa6.61□□□□□ -1.35
PEX3YDR329C TPO1Q07824 586 aa6.61□□□□□ -1.35
PEX3YDR329C NOB1Q08444 459 aaKnown RBP6.61□□□□□ -1.35
PEX3YDR329C YPR027CQ12079 277 aa6.61□□□□□ -1.35
PEX3YDR329C CTF3Q12748 733 aa6.61□□□□□ -1.35
PEX3YDR329C ILV2P07342 687 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C RPL4AP10664 362 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C CDC24P11433 854 aaPredicted RBP6.6□□□□□ -1.35
PEX3YDR329C PRP16P15938 1071 aaPredicted RBP6.6□□□□□ -1.35
PEX3YDR329C HEM15P16622 393 aa6.6□□□□□ -1.35
PEX3YDR329C TSR4P25040 408 aa6.6□□□□□ -1.35
PEX3YDR329C PUF4P25339 888 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35 RIP-Chip
PEX3YDR329C LRE1P25579 583 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C VBA3P25594 458 aa6.6□□□□□ -1.35
PEX3YDR329C MRP4P32902 394 aa6.6□□□□□ -1.35
PEX3YDR329C SLA2P33338 968 aa6.6□□□□□ -1.35
PEX3YDR329C PEX5P35056 612 aa6.6□□□□□ -1.35
PEX3YDR329C VBA5P36172 582 aa6.6□□□□□ -1.35
PEX3YDR329C PCF11P39081 626 aaPredicted RBP6.6□□□□□ -1.35
PEX3YDR329C RPL34BP40525 121 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C TDA10P42938 290 aa6.6□□□□□ -1.35
PEX3YDR329C RPL4BP49626 362 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C TAF6P53040 516 aa6.6□□□□□ -1.35
PEX3YDR329C UTP8P53276 713 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C SND1Q04007 877 aa6.6□□□□□ -1.35
PEX3YDR329C CMS1Q07897 291 aaKnown RBP6.6□□□□□ -1.35
PEX3YDR329C THI21Q08975 551 aa6.6□□□□□ -1.35
PEX3YDR329C HRT3Q12347 344 aa6.6□□□□□ -1.35
PEX3YDR329C LAA1P39526 2014 aa6.59□□□□□ -1.35
PEX3YDR329C RPP1AP05318 106 aaPredicted RBP6.59□□□□□ -1.35
PEX3YDR329C CHS1P08004 1131 aa6.59□□□□□ -1.35
PEX3YDR329C PPG1P32838 368 aa6.59□□□□□ -1.35
PEX3YDR329C SRB2P34162 210 aa6.59□□□□□ -1.35
PEX3YDR329C TSA1P34760 196 aaKnown RBP6.59□□□□□ -1.35
PEX3YDR329C MRPL16P38064 232 aa6.59□□□□□ -1.35
PEX3YDR329C HEK2P38199 381 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
PEX3YDR329C CKB2P38930 258 aa6.59□□□□□ -1.35
PEX3YDR329C GIP4P39732 760 aa6.59□□□□□ -1.35
PEX3YDR329C MRX1P40050 688 aa6.59□□□□□ -1.35
PEX3YDR329C DSE1P40077 573 aa6.59□□□□□ -1.35
PEX3YDR329C PFD1P46988 109 aa6.59□□□□□ -1.35
PEX3YDR329C LSC1P53598 329 aaKnown RBP6.59□□□□□ -1.35
PEX3YDR329C ESF2P53743 316 aaKnown RBP6.59□□□□□ -1.35
PEX3YDR329C RKM2Q03942 479 aa6.59□□□□□ -1.35
PEX3YDR329C SHE9Q04172 456 aa6.59□□□□□ -1.35
PEX3YDR329C JIP5Q06214 492 aaPredicted RBP6.59□□□□□ -1.35
PEX3YDR329C MDM38Q08179 573 aa6.59□□□□□ -1.35
PEX3YDR329C THI20Q08224 551 aa6.59□□□□□ -1.35
PEX3YDR329C YPQ1Q12010 308 aa6.59□□□□□ -1.35
PEX3YDR329C EMP46Q12396 444 aa6.59□□□□□ -1.35
PEX3YDR329C PPH22P23595 377 aa6.58□□□□□ -1.36
PEX3YDR329C URA7P28274 579 aaKnown RBP6.58□□□□□ -1.36
PEX3YDR329C FRE1P32791 686 aa6.58□□□□□ -1.36
PEX3YDR329C TCD2P36101 447 aaKnown RBP6.58□□□□□ -1.36
PEX3YDR329C GIP1P38229 639 aa6.58□□□□□ -1.36
PEX3YDR329C LIN1P38852 340 aaPredicted RBP6.58□□□□□ -1.36
PEX3YDR329C FLC2P39719 783 aa6.58□□□□□ -1.36
PEX3YDR329C SCC4P40090 624 aa6.58□□□□□ -1.36
PEX3YDR329C MNN11P46985 422 aaKnown RBP6.58□□□□□ -1.36
PEX3YDR329C RFX1P48743 811 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms