Protein–RNA interactions for Protein: P17106

CBF1, Centromere-binding protein 1, yeastyeast

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CBF1P17106 NSR1YGR159C 1245 nt20.92■□□□□ 0.94
CBF1P17106 YML009W-BYML009W-B 477 nt20.78■□□□□ 0.92
CBF1P17106 NOP1YDL014W 984 nt20.02■□□□□ 0.8
CBF1P17106 MDJ1YFL016C 1536 nt18.93■□□□□ 0.62
CBF1P17106 YKL036CYKL036C 393 nt18.23■□□□□ 0.51
CBF1P17106 SRX1YKL086W 384 nt17.54■□□□□ 0.4
CBF1P17106 Q0297Q0297 156 nt17.48■□□□□ 0.39
CBF1P17106 YJL027CYJL027C 417 nt17.38■□□□□ 0.37
CBF1P17106 DBP2YNL112W 1641 nt16.67■□□□□ 0.26
CBF1P17106 YCR051WYCR051W 669 nt16.63■□□□□ 0.25
CBF1P17106 SCS3YGL126W 1143 nt16.47■□□□□ 0.23
CBF1P17106 YBR190WYBR190W 312 nt16.16■□□□□ 0.18
CBF1P17106 TRN1tP(UGG)A 72 nt16.06■□□□□ 0.16
CBF1P17106 SUF9tP(UGG)F 72 nt16.06■□□□□ 0.16
CBF1P17106 SUF8tP(UGG)H 72 nt16.06■□□□□ 0.16
CBF1P17106 tP(UGG)LtP(UGG)L 72 nt16.06■□□□□ 0.16
CBF1P17106 SUF7tP(UGG)M 72 nt16.06■□□□□ 0.16
CBF1P17106 tP(UGG)N1tP(UGG)N1 72 nt16.06■□□□□ 0.16
CBF1P17106 tP(UGG)N2tP(UGG)N2 72 nt16.06■□□□□ 0.16
CBF1P17106 tP(UGG)O1tP(UGG)O1 72 nt16.06■□□□□ 0.16
CBF1P17106 SUF11tP(UGG)O2 72 nt16.06■□□□□ 0.16
CBF1P17106 CCC1YLR220W 969 nt15.93■□□□□ 0.14
CBF1P17106 YOL085CYOL085C 342 nt15.86■□□□□ 0.13
CBF1P17106 RTC3YHR087W 336 nt15.78■□□□□ 0.12
CBF1P17106 RPP1BYDL130W 321 nt15.69■□□□□ 0.1
CBF1P17106 PKP1YIL042C 1185 nt15.69■□□□□ 0.1
CBF1P17106 SCJ1YMR214W 1134 nt15.43■□□□□ 0.06
CBF1P17106 RVS167YDR388W 1449 nt15.43■□□□□ 0.06
CBF1P17106 tP(UGG)O3tP(UGG)O3 72 nt15.11■□□□□ 0.01
CBF1P17106 PET122YER153C 765 nt15.06■□□□□ 0
CBF1P17106 PUT4YOR348C 1884 nt14.97□□□□□ -0.01
CBF1P17106 SHR5YOL110W 714 nt14.87□□□□□ -0.03
CBF1P17106 SSA3YBL075C 1950 nt14.73□□□□□ -0.05
CBF1P17106 SCR1SCR1 522 nt14.71□□□□□ -0.05
CBF1P17106 URN1YPR152C 1398 nt14.68□□□□□ -0.06
CBF1P17106 ATS1YAL020C 1002 nt14.65□□□□□ -0.06
CBF1P17106 DEP1YAL013W 1218 nt14.64□□□□□ -0.07
CBF1P17106 ARE1YCR048W 1833 nt14.62□□□□□ -0.07
CBF1P17106 RRN5YLR141W 1092 nt14.61□□□□□ -0.07
CBF1P17106 YDJ1YNL064C 1230 nt14.58□□□□□ -0.08
CBF1P17106 SAH1YER043C 1350 nt14.57□□□□□ -0.08
CBF1P17106 OPI9YLR338W 858 nt14.53□□□□□ -0.08
CBF1P17106 POA1YBR022W 534 nt14.5□□□□□ -0.09
CBF1P17106 YHR049C-AYHR049C-A 297 nt14.38□□□□□ -0.11
CBF1P17106 GAR1YHR089C 618 nt14.35□□□□□ -0.11
CBF1P17106 YER088W-BYER088W-B 147 nt14.32□□□□□ -0.12
CBF1P17106 YNL208WYNL208W 600 nt14.29□□□□□ -0.12
CBF1P17106 RPN10YHR200W 807 nt14.28□□□□□ -0.12
CBF1P17106 BSC6YOL137W 1494 nt14.21□□□□□ -0.13
CBF1P17106 RSB1YOR049C 1065 nt14.17□□□□□ -0.14
CBF1P17106 PUN1YLR414C 792 nt14.05□□□□□ -0.16
CBF1P17106 BUD23YCR047C 828 nt14.03□□□□□ -0.16
CBF1P17106 PTC2YER089C 1395 nt14.01□□□□□ -0.17
CBF1P17106 YJR018WYJR018W 363 nt13.99□□□□□ -0.17
CBF1P17106 TIR1YER011W 765 nt13.87□□□□□ -0.19
CBF1P17106 SPT5YML010W 3192 nt13.86□□□□□ -0.19
CBF1P17106 NAB2YGL122C 1578 nt13.82□□□□□ -0.2
CBF1P17106 SSA1YAL005C 1929 nt13.82□□□□□ -0.2
CBF1P17106 YJR120WYJR120W 351 nt13.8□□□□□ -0.2
CBF1P17106 PST2YDR032C 597 nt13.65□□□□□ -0.22
CBF1P17106 FIS1YIL065C 468 nt13.63□□□□□ -0.23
CBF1P17106 SRB2YHR041C 633 nt13.62□□□□□ -0.23
CBF1P17106 DAL1YIR027C 1383 nt13.58□□□□□ -0.23
CBF1P17106 FPR4YLR449W 1179 nt13.57□□□□□ -0.24
CBF1P17106 RPP2BYDR382W 333 nt13.54□□□□□ -0.24
CBF1P17106 INM2YDR287W 879 nt13.5□□□□□ -0.25
CBF1P17106 PHO4YFR034C 939 nt13.47□□□□□ -0.25
CBF1P17106 SSA4YER103W 1929 nt13.43□□□□□ -0.26
CBF1P17106 MEP2YNL142W 1500 nt13.36□□□□□ -0.27
CBF1P17106 YPS1YLR120C 1710 nt13.33□□□□□ -0.27
CBF1P17106 YBL100CYBL100C 315 nt13.32□□□□□ -0.28
CBF1P17106 BDH2YAL061W 1254 nt13.27□□□□□ -0.29
CBF1P17106 WWM1YFL010C 636 nt13.25□□□□□ -0.29
CBF1P17106 DCW1YKL046C 1350 nt13.21□□□□□ -0.29
CBF1P17106 FUN26YAL022C 1554 nt13.19□□□□□ -0.3
CBF1P17106 YDR095CYDR095C 411 nt13.18□□□□□ -0.3
CBF1P17106 SHU1YHL006C 453 nt13.18□□□□□ -0.3
CBF1P17106 YHR165W-AYHR165W-A 312 nt13.18□□□□□ -0.3
CBF1P17106 YAL037C-BYAL037C-B 975 nt13.12□□□□□ -0.31
CBF1P17106 TRM9YML014W 840 nt13.08□□□□□ -0.32
CBF1P17106 LSM3YLR438C-A 270 nt13.03□□□□□ -0.32
CBF1P17106 PTP1YDL230W 1008 nt13.01□□□□□ -0.33
CBF1P17106 ALF1YNL148C 765 nt13□□□□□ -0.33
CBF1P17106 CAC2YML102W 1407 nt12.98□□□□□ -0.33
CBF1P17106 HOM6YJR139C 1080 nt12.98□□□□□ -0.33
CBF1P17106 BDF1YLR399C 2061 nt12.98□□□□□ -0.33
CBF1P17106 EMI2YDR516C 1503 nt12.98□□□□□ -0.33
CBF1P17106 CCT6YDR188W 1641 nt12.97□□□□□ -0.33
CBF1P17106 YFL021C-AYFL021C-A 855 nt12.95□□□□□ -0.34
CBF1P17106 YGR021WYGR021W 873 nt12.95□□□□□ -0.34
CBF1P17106 RPP2AYOL039W 321 nt12.94□□□□□ -0.34
CBF1P17106 MNP1YGL068W 585 nt12.9□□□□□ -0.34
CBF1P17106 SIS1YNL007C 1059 nt12.88□□□□□ -0.35
CBF1P17106 YKL097CYKL097C 411 nt12.87□□□□□ -0.35
CBF1P17106 YBR220CYBR220C 1683 nt12.86□□□□□ -0.35
CBF1P17106 YDL221WYDL221W 552 nt12.85□□□□□ -0.35
CBF1P17106 SUF2tP(AGG)C 72 nt12.81□□□□□ -0.36
CBF1P17106 SUF10tP(AGG)N 72 nt12.81□□□□□ -0.36
CBF1P17106 YMR090WYMR090W 684 nt12.81□□□□□ -0.36
CBF1P17106 RKM5YLR137W 1104 nt12.78□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms