RNA–Protein interactions for RNA: YDR329C

PEX3, Transcript of Peroxisomal membrane protein (PMP), yeastyeast

Gene PEX3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX3YDR329C MTC1P47018 478 aaKnown RBP15.54■□□□□ 0.08
PEX3YDR329C FAP1P53971 965 aa14.5□□□□□ -0.09
PEX3YDR329C DRS1P32892 752 aaKnown RBP14.06□□□□□ -0.16
PEX3YDR329C PRY3P47033 881 aa13.63□□□□□ -0.23
PEX3YDR329C INO80P53115 1489 aa13.51□□□□□ -0.25
PEX3YDR329C MON2P48563 1636 aaPredicted RBP13.41□□□□□ -0.26
PEX3YDR329C PRI1P10363 409 aa13.34□□□□□ -0.27
PEX3YDR329C AAD16Q02895 342 aa13.34□□□□□ -0.27
PEX3YDR329C ISW2Q08773 1120 aa13.04□□□□□ -0.32
PEX3YDR329C RPG1P38249 964 aaKnown RBP12.84□□□□□ -0.35
PEX3YDR329C DNA2P38859 1522 aa12.82□□□□□ -0.36
PEX3YDR329C HAA1Q12753 694 aaKnown RBP12.81□□□□□ -0.36
PEX3YDR329C YCK3P39962 524 aa12.71□□□□□ -0.37
PEX3YDR329C SWR1Q05471 1514 aa12.67□□□□□ -0.38
PEX3YDR329C RSE1Q04693 1361 aaKnown RBP12.59□□□□□ -0.39
PEX3YDR329C KOG1P38873 1557 aa12.58□□□□□ -0.4
PEX3YDR329C TSR3Q12094 313 aaKnown RBP12.55□□□□□ -0.4
PEX3YDR329C DIP2Q12220 943 aaPredicted RBP12.48□□□□□ -0.41
PEX3YDR329C TCB3Q03640 1545 aaKnown RBP12.46□□□□□ -0.41
PEX3YDR329C TY1B-DR4Q07793 1604 aa12.37□□□□□ -0.43
PEX3YDR329C MRPL32P25348 183 aa12.14□□□□□ -0.47
PEX3YDR329C SGS1P35187 1447 aa12.09□□□□□ -0.47
PEX3YDR329C SPT6P23615 1451 aaKnown RBP11.94□□□□□ -0.5
PEX3YDR329C HSL1P34244 1518 aa11.91□□□□□ -0.5
PEX3YDR329C SPA2P23201 1466 aaKnown RBP11.9□□□□□ -0.5
PEX3YDR329C REB1P21538 810 aa11.88□□□□□ -0.51
PEX3YDR329C AVT3P36062 692 aa11.88□□□□□ -0.51
PEX3YDR329C ECM5Q03214 1411 aa11.87□□□□□ -0.51
PEX3YDR329C RPL17AP05740 184 aaKnown RBP11.85□□□□□ -0.51
PEX3YDR329C RPL17BP46990 184 aaKnown RBP11.85□□□□□ -0.51
PEX3YDR329C YGL015CP33199 130 aa11.78□□□□□ -0.52
PEX3YDR329C BUD4P47136 1447 aa11.72□□□□□ -0.53
PEX3YDR329C THO2P53552 1597 aaKnown RBP11.65□□□□□ -0.54
PEX3YDR329C HIR3P47171 1648 aa11.64□□□□□ -0.55
PEX3YDR329C MDS3P53094 1487 aa11.59□□□□□ -0.55
PEX3YDR329C BFR2Q06631 534 aaKnown RBP11.5□□□□□ -0.57
PEX3YDR329C REV3P14284 1504 aa11.47□□□□□ -0.57
PEX3YDR329C XRN1P22147 1528 aaKnown RBP11.42□□□□□ -0.58
PEX3YDR329C PEP1P32319 1579 aa11.41□□□□□ -0.58
PEX3YDR329C CDC27P38042 758 aa11.35□□□□□ -0.59
PEX3YDR329C BPT1P14772 1559 aa11.33□□□□□ -0.6
PEX3YDR329C SPT21P35209 758 aa11.27□□□□□ -0.61
PEX3YDR329C ATG2P53855 1592 aa11.26□□□□□ -0.61
PEX3YDR329C YKR023WP36119 530 aaKnown RBP11.22□□□□□ -0.61
PEX3YDR329C UBP10P53874 792 aaPredicted RBP11.21□□□□□ -0.61
PEX3YDR329C MIF2P35201 549 aa11.14□□□□□ -0.63
PEX3YDR329C SKI3P17883 1432 aaKnown RBP11.14□□□□□ -0.63
PEX3YDR329C YCF1P39109 1515 aaKnown RBP11.11□□□□□ -0.63
PEX3YDR329C TAF2P23255 1407 aa11.09□□□□□ -0.63
PEX3YDR329C MAP2P38174 421 aaKnown RBP11.09□□□□□ -0.63
PEX3YDR329C SSK2P53599 1579 aa11.03□□□□□ -0.64
PEX3YDR329C TFC8Q12308 588 aa11.03□□□□□ -0.64
PEX3YDR329C HOP09932 586 aa11□□□□□ -0.65
PEX3YDR329C BUD31P25337 157 aaPredicted RBP10.97□□□□□ -0.65
PEX3YDR329C SIN3P22579 1536 aa10.97□□□□□ -0.65
PEX3YDR329C SSN2P38931 1420 aa10.94□□□□□ -0.66
PEX3YDR329C UFD4P33202 1483 aa10.94□□□□□ -0.66
PEX3YDR329C DCD1P06773 312 aa10.93□□□□□ -0.66
PEX3YDR329C MET5P47169 1442 aa10.9□□□□□ -0.66
PEX3YDR329C LTE1P07866 1435 aa10.85□□□□□ -0.67
PEX3YDR329C CHD1P32657 1468 aa10.81□□□□□ -0.68
PEX3YDR329C ESP1Q03018 1630 aa10.81□□□□□ -0.68
PEX3YDR329C SCY1P53009 804 aa10.81□□□□□ -0.68
PEX3YDR329C MYO2P19524 1574 aaKnown RBP10.8□□□□□ -0.68
PEX3YDR329C RIM101P33400 625 aa10.79□□□□□ -0.68
PEX3YDR329C TIF4632P39936 914 aaKnown RBP10.79□□□□□ -0.68
PEX3YDR329C RQC2Q12532 1038 aaKnown RBP10.79□□□□□ -0.68
PEX3YDR329C SCC2Q04002 1493 aa10.77□□□□□ -0.69
PEX3YDR329C YPK9Q12697 1472 aa10.76□□□□□ -0.69
PEX3YDR329C CDC25P04821 1589 aa10.76□□□□□ -0.69
PEX3YDR329C DNF1P32660 1571 aa10.76□□□□□ -0.69
PEX3YDR329C ABP1P15891 592 aaKnown RBP10.75□□□□□ -0.69
PEX3YDR329C SLX5P32828 619 aaKnown RBP10.74□□□□□ -0.69
PEX3YDR329C YFR006WP43590 535 aa10.74□□□□□ -0.69
PEX3YDR329C RPO31P04051 1460 aa10.72□□□□□ -0.69
PEX3YDR329C ITT1Q04638 464 aa10.71□□□□□ -0.69
PEX3YDR329C TGL3P40308 642 aa10.7□□□□□ -0.7
PEX3YDR329C PAN1P32521 1480 aa10.68□□□□□ -0.7
PEX3YDR329C BNI1P41832 1953 aa10.67□□□□□ -0.7
PEX3YDR329C RPA190P10964 1664 aaKnown RBP10.67□□□□□ -0.7
PEX3YDR329C ESC1Q03661 1658 aaKnown RBP10.67□□□□□ -0.7
PEX3YDR329C RKR1Q04781 1562 aa10.67□□□□□ -0.7
PEX3YDR329C GEA2P39993 1459 aaKnown RBP10.66□□□□□ -0.7
PEX3YDR329C BCH2P36122 765 aa10.63□□□□□ -0.71
PEX3YDR329C UBP9P39967 754 aa10.58□□□□□ -0.72
PEX3YDR329C MMS1Q06211 1407 aa10.57□□□□□ -0.72
PEX3YDR329C TY2B-LR1P0C2J3 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-FP0CX63 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-GR2P0CX64 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-CP25384 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-DR2Q03494 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY1B-DR1Q03855 1755 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-DR3Q07791 1770 aaKnown RBP10.56□□□□□ -0.72
PEX3YDR329C TY2B-OR1Q12113 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY1B-BRQ12193 1756 aa10.56□□□□□ -0.72
PEX3YDR329C TY1B-GR3Q12316 1755 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-DR1Q12472 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY2B-OR2Q12501 1770 aa10.56□□□□□ -0.72
PEX3YDR329C TY1B-ORQ92393 1755 aa10.56□□□□□ -0.72
PEX3YDR329C TOP2P06786 1428 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms