RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 PolqQ8CGS6 2544 aa7.41□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 4933415A04RikQ9D443 101 aa7.41□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Wfdc12Q9JHY3 85 aa7.41□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Col6a5A6H584 2640 aa7.41□□□□□ -1.22
Prpf40b-202ENSMUST00000118287 Igkv4-58A0A0G2JGI6 119 aa7.4□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Reg3aO09037 175 aa7.4□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Ly6c2P0CW03 131 aa7.39□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Q9DAA7 145 aa7.39□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 6430550D23RikE9Q1X6 194 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Ighv2-5A0A0A6YY69 116 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv4-72A0A0B4J1I4 117 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv8-18A0A0B4J1J3 123 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv4-53A0A0G2JFC6 119 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv3-12A0A140T8P0 119 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Fam229bQ8CF36 80 aa7.38□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv8-16A0A0G2JDG9 121 aa7.37□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm10518F6UQQ9 182 aa7.37□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 E130208F15RikQ3UPV3 143 aa7.36□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm10320E9PW43 113 aa7.36□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm43218A0A0G2JGT0 114 aa7.36□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm21887J3QQ04 176 aa7.36□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv8-21A0A140T8P7 120 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Ube2bP63147 152 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 PrcdQ00LT2 53 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Ormdl1Q921I0 153 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Ubl5Q9EPV8 73 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Trbv13-2A0A140T8N6 113 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Leap2Q91V13 76 aa7.35□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Trav9n-4A0A075B631 113 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Spink4O35679 86 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm10643Q3URG9 111 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Igkv4-54A0A0G2JES9 117 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm36176A0A1W2P8D5 158 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm9903Q8C9Y8 129 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 UqcrqQ9CQ69 82 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Reg3dQ9QUS9 175 aa7.34□□□□□ -1.23
Prpf40b-202ENSMUST00000118287 Gm7138L7N2C3 230 aa7.34□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm3238W4VSP7 230 aa7.34□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Odf3l2Q3TZ65 277 aa7.33□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv8-27A0A0G2JF28 120 aa7.33□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv8-30A0A140T8M3 121 aa7.33□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Higd2aQ9CQJ1 106 aa7.33□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv8-24A0A140T8P5 121 aa7.32□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv3-3A0A140T8Q0 119 aa7.32□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 AI606181Q8C7B9 129 aa7.32□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Srrm2Q8BTI8 2703 aaKnown RBP7.32□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Ighv10-3A0A075B5T6 119 aa7.32□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv8-26A0A075B5N5 123 aa7.31□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Ighv1-59A0A0A6YXE0 117 aa7.31□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Prm2P07978 107 aa7.31□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 A0A286YCN5 57 aa7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Wfdc17Q5SSJ1 76 aa7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Fam19a3Q7TPG6 132 aa7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm7137J3QMW1 236 aa7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm10570F6VB42 170 aa7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Znf706Q9D115 76 aaKnown RBP7.3□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm17689B3GLJ4 109 aa7.29□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm9805F6YK59 57 aa7.29□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm10308Q9CVR5 141 aa7.29□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Sprr1bQ62267 153 aa7.29□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 PtprqP0C5E4 2300 aa7.29□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igkv4-61A0A0G2JH00 117 aa7.28□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Igsf10Q3V1M1 2594 aa7.28□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm9821Q8K076 103 aa7.28□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Gm12216A0A1W2P827 62 aa7.28□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Defb10Q8R2I8 73 aa7.28□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Ighv2-9A0A075B5Q5 116 aa7.27□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 Phf5aP83870 110 aaKnown RBP7.27□□□□□ -1.24
Prpf40b-202ENSMUST00000118287 ApcQ61315 2845 aa7.27□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Igkv3-9A0A140T8P4 119 aa7.27□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Igkv3-7A0A0G2JE31 119 aa7.26□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Defb37Q7TMD2 62 aa7.26□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Igkv1-88A0A140T8N1 120 aa7.25□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Ube2aQ9Z255 152 aa7.25□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Tcl1b3P56842 122 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Psors1c2Q80ZC9 134 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 9530003J23RikQ8BM26 151 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Msrb1Q9JLC3 116 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Igkv1-110A0A0B4J1I0 119 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Gm20538F6Z9R1 75 aa7.24□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Ighv10-1A0A0B4J1J6 119 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 2310034C09RikQ9D746 214 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Krtap11-1E9Q2E9 183 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Gm10401E9Q3K6 71 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Cox7bP56393 80 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 1700074P13RikQ9D9G7 251 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Notch1Q01705 2531 aa7.23□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 A830005F24RikQ8BRT5 167 aa7.22□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 Cdc42se1Q8BHL7 80 aa7.21□□□□□ -1.25
Prpf40b-202ENSMUST00000118287 D730001G18RikA0A087WQU7 115 aa7.21□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 VwfQ8CIZ8 2813 aa7.2□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Igkv3-1A0A075B5P1 119 aa7.2□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Cmc4Q61908 68 aa7.2□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Klk9Q32M27 251 aa7.2□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Igkv1-122A0A140T8M9 119 aa7.19□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Atox1O08997 68 aaKnown RBP7.19□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 A730071L15RikQ8C4X0 137 aa7.19□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Gm3646F6S692 53 aa7.18□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Gm17577J3QNF7 156 aa7.18□□□□□ -1.26
Prpf40b-202ENSMUST00000118287 Ndufc1Q9CQY9 76 aa7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms