Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv8-27A0A0G2JF28 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Igkv8-27A0A0G2JF28 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv8-27A0A0G2JF28 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv8-27A0A0G2JF28 Psd-208ENSMUST00000224556 2034 ntBASIC20.57■□□□□ 0.88
Igkv8-27A0A0G2JF28 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv8-27A0A0G2JF28 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Igkv8-27A0A0G2JF28 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv8-27A0A0G2JF28 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv8-27A0A0G2JF28 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv8-27A0A0G2JF28 Gm25239-201ENSMUST00000174915 86 ntBASIC19.48■□□□□ 0.71
Igkv8-27A0A0G2JF28 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv8-27A0A0G2JF28 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Igkv8-27A0A0G2JF28 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv8-27A0A0G2JF28 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Igkv8-27A0A0G2JF28 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv8-27A0A0G2JF28 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv8-27A0A0G2JF28 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv8-27A0A0G2JF28 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Igkv8-27A0A0G2JF28 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv8-27A0A0G2JF28 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv8-27A0A0G2JF28 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv8-27A0A0G2JF28 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Igkv8-27A0A0G2JF28 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.72■□□□□ 0.59
Igkv8-27A0A0G2JF28 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.71■□□□□ 0.59
Igkv8-27A0A0G2JF28 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Igkv8-27A0A0G2JF28 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv8-27A0A0G2JF28 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv8-27A0A0G2JF28 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.62■□□□□ 0.57
Igkv8-27A0A0G2JF28 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv8-27A0A0G2JF28 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.58■□□□□ 0.56
Igkv8-27A0A0G2JF28 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv8-27A0A0G2JF28 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv8-27A0A0G2JF28 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Igkv8-27A0A0G2JF28 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv8-27A0A0G2JF28 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv8-27A0A0G2JF28 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.24■□□□□ 0.51
Igkv8-27A0A0G2JF28 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv8-27A0A0G2JF28 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv8-27A0A0G2JF28 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv8-27A0A0G2JF28 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.08■□□□□ 0.48
Igkv8-27A0A0G2JF28 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Igkv8-27A0A0G2JF28 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv8-27A0A0G2JF28 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv8-27A0A0G2JF28 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18■□□□□ 0.47
Igkv8-27A0A0G2JF28 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Igkv8-27A0A0G2JF28 Gm15042-201ENSMUST00000120212 883 ntBASIC17.94■□□□□ 0.46
Igkv8-27A0A0G2JF28 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv8-27A0A0G2JF28 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv8-27A0A0G2JF28 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv8-27A0A0G2JF28 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv8-27A0A0G2JF28 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv8-27A0A0G2JF28 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Igkv8-27A0A0G2JF28 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Igkv8-27A0A0G2JF28 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.78■□□□□ 0.44
Igkv8-27A0A0G2JF28 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv8-27A0A0G2JF28 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv8-27A0A0G2JF28 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv8-27A0A0G2JF28 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv8-27A0A0G2JF28 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv8-27A0A0G2JF28 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv8-27A0A0G2JF28 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Igkv8-27A0A0G2JF28 Gm15045-201ENSMUST00000117359 883 ntBASIC17.7■□□□□ 0.42
Igkv8-27A0A0G2JF28 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Igkv8-27A0A0G2JF28 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.68■□□□□ 0.42
Igkv8-27A0A0G2JF28 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv8-27A0A0G2JF28 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-27A0A0G2JF28 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-27A0A0G2JF28 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.64■□□□□ 0.41
Igkv8-27A0A0G2JF28 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv8-27A0A0G2JF28 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv8-27A0A0G2JF28 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv8-27A0A0G2JF28 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv8-27A0A0G2JF28 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Igkv8-27A0A0G2JF28 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Igkv8-27A0A0G2JF28 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Igkv8-27A0A0G2JF28 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Igkv8-27A0A0G2JF28 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.5■□□□□ 0.39
Igkv8-27A0A0G2JF28 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv8-27A0A0G2JF28 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Igkv8-27A0A0G2JF28 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv8-27A0A0G2JF28 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv8-27A0A0G2JF28 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv8-27A0A0G2JF28 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv8-27A0A0G2JF28 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv8-27A0A0G2JF28 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Igkv8-27A0A0G2JF28 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv8-27A0A0G2JF28 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv8-27A0A0G2JF28 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv8-27A0A0G2JF28 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv8-27A0A0G2JF28 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv8-27A0A0G2JF28 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv8-27A0A0G2JF28 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv8-27A0A0G2JF28 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv8-27A0A0G2JF28 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Igkv8-27A0A0G2JF28 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv8-27A0A0G2JF28 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.16■□□□□ 0.34
Igkv8-27A0A0G2JF28 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv8-27A0A0G2JF28 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Igkv8-27A0A0G2JF28 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms