Protein–RNA interactions for Protein: A0A140T8M9

Igkv1-122, Immunoglobulin kappa chain variable 1-122 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-122A0A140T8M9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21,71■■□□□ 1,07
Igkv1-122A0A140T8M9 Gm25239-201ENSMUST00000174915 86 ntBASIC21,27■■□□□ 1
Igkv1-122A0A140T8M9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20,9■□□□□ 0,94
Igkv1-122A0A140T8M9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,9■□□□□ 0,94
Igkv1-122A0A140T8M9 Psd-208ENSMUST00000224556 2034 ntBASIC20,31■□□□□ 0,84
Igkv1-122A0A140T8M9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,21■□□□□ 0,83
Igkv1-122A0A140T8M9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,9■□□□□ 0,78
Igkv1-122A0A140T8M9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19,9■□□□□ 0,78
Igkv1-122A0A140T8M9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19,9■□□□□ 0,78
Igkv1-122A0A140T8M9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19,71■□□□□ 0,75
Igkv1-122A0A140T8M9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19,64■□□□□ 0,74
Igkv1-122A0A140T8M9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19,45■□□□□ 0,7
Igkv1-122A0A140T8M9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Igkv1-122A0A140T8M9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Igkv1-122A0A140T8M9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19,39■□□□□ 0,69
Igkv1-122A0A140T8M9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19,37■□□□□ 0,69
Igkv1-122A0A140T8M9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Igkv1-122A0A140T8M9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Igkv1-122A0A140T8M9 Gm15042-201ENSMUST00000120212 883 ntBASIC19,22■□□□□ 0,67
Igkv1-122A0A140T8M9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19,2■□□□□ 0,66
Igkv1-122A0A140T8M9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19,11■□□□□ 0,65
Igkv1-122A0A140T8M9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Igkv1-122A0A140T8M9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,04■□□□□ 0,64
Igkv1-122A0A140T8M9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0,63
Igkv1-122A0A140T8M9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,97■□□□□ 0,63
Igkv1-122A0A140T8M9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,91■□□□□ 0,62
Igkv1-122A0A140T8M9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,86■□□□□ 0,61
Igkv1-122A0A140T8M9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18,85■□□□□ 0,61
Igkv1-122A0A140T8M9 Gm15045-201ENSMUST00000117359 883 ntBASIC18,84■□□□□ 0,61
Igkv1-122A0A140T8M9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Igkv1-122A0A140T8M9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv1-122A0A140T8M9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18,68■□□□□ 0,58
Igkv1-122A0A140T8M9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Igkv1-122A0A140T8M9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18,64■□□□□ 0,57
Igkv1-122A0A140T8M9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18,62■□□□□ 0,57
Igkv1-122A0A140T8M9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18,58■□□□□ 0,56
Igkv1-122A0A140T8M9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18,55■□□□□ 0,56
Igkv1-122A0A140T8M9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Igkv1-122A0A140T8M9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18,53■□□□□ 0,56
Igkv1-122A0A140T8M9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18,53■□□□□ 0,56
Igkv1-122A0A140T8M9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18,52■□□□□ 0,56
Igkv1-122A0A140T8M9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18,45■□□□□ 0,54
Igkv1-122A0A140T8M9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,45■□□□□ 0,54
Igkv1-122A0A140T8M9 Gm10524-201ENSMUST00000181931 1893 ntBASIC18,38■□□□□ 0,53
Igkv1-122A0A140T8M9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18,37■□□□□ 0,53
Igkv1-122A0A140T8M9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18,34■□□□□ 0,53
Igkv1-122A0A140T8M9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,29■□□□□ 0,52
Igkv1-122A0A140T8M9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Igkv1-122A0A140T8M9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Igkv1-122A0A140T8M9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18,23■□□□□ 0,51
Igkv1-122A0A140T8M9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18,21■□□□□ 0,51
Igkv1-122A0A140T8M9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18,2■□□□□ 0,5
Igkv1-122A0A140T8M9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18,18■□□□□ 0,5
Igkv1-122A0A140T8M9 Gm42596-201ENSMUST00000196305 1958 ntBASIC18,17■□□□□ 0,5
Igkv1-122A0A140T8M9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18,15■□□□□ 0,5
Igkv1-122A0A140T8M9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18,14■□□□□ 0,49
Igkv1-122A0A140T8M9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18,12■□□□□ 0,49
Igkv1-122A0A140T8M9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,09■□□□□ 0,49
Igkv1-122A0A140T8M9 Gm24109-201ENSMUST00000175489 103 ntBASIC18,09■□□□□ 0,49
Igkv1-122A0A140T8M9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv1-122A0A140T8M9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18,02■□□□□ 0,48
Igkv1-122A0A140T8M9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17,99■□□□□ 0,47
Igkv1-122A0A140T8M9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17,99■□□□□ 0,47
Igkv1-122A0A140T8M9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17,99■□□□□ 0,47
Igkv1-122A0A140T8M9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17,94■□□□□ 0,46
Igkv1-122A0A140T8M9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17,92■□□□□ 0,46
Igkv1-122A0A140T8M9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17,91■□□□□ 0,46
Igkv1-122A0A140T8M9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17,91■□□□□ 0,46
Igkv1-122A0A140T8M9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17,89■□□□□ 0,46
Igkv1-122A0A140T8M9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17,89■□□□□ 0,45
Igkv1-122A0A140T8M9 Gm23366-201ENSMUST00000175022 89 ntBASIC17,88■□□□□ 0,45
Igkv1-122A0A140T8M9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17,87■□□□□ 0,45
Igkv1-122A0A140T8M9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17,84■□□□□ 0,45
Igkv1-122A0A140T8M9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,83■□□□□ 0,45
Igkv1-122A0A140T8M9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17,83■□□□□ 0,45
Igkv1-122A0A140T8M9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17,82■□□□□ 0,44
Igkv1-122A0A140T8M9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17,81■□□□□ 0,44
Igkv1-122A0A140T8M9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17,81■□□□□ 0,44
Igkv1-122A0A140T8M9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17,81■□□□□ 0,44
Igkv1-122A0A140T8M9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv1-122A0A140T8M9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17,79■□□□□ 0,44
Igkv1-122A0A140T8M9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv1-122A0A140T8M9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv1-122A0A140T8M9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17,74■□□□□ 0,43
Igkv1-122A0A140T8M9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Igkv1-122A0A140T8M9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Igkv1-122A0A140T8M9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17,72■□□□□ 0,43
Igkv1-122A0A140T8M9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17,71■□□□□ 0,43
Igkv1-122A0A140T8M9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17,67■□□□□ 0,42
Igkv1-122A0A140T8M9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,42
Igkv1-122A0A140T8M9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,42
Igkv1-122A0A140T8M9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17,63■□□□□ 0,41
Igkv1-122A0A140T8M9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17,61■□□□□ 0,41
Igkv1-122A0A140T8M9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17,59■□□□□ 0,41
Igkv1-122A0A140T8M9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17,57■□□□□ 0,4
Igkv1-122A0A140T8M9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17,54■□□□□ 0,4
Igkv1-122A0A140T8M9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17,52■□□□□ 0,4
Igkv1-122A0A140T8M9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17,52■□□□□ 0,4
Igkv1-122A0A140T8M9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17,51■□□□□ 0,39
Igkv1-122A0A140T8M9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17,5■□□□□ 0,39
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms