Protein–RNA interactions for Protein: A0A140T8P0

Igkv3-12, Immunoglobulin kappa variable 3-12 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-12A0A140T8P0 Gm25239-201ENSMUST00000174915 86 ntBASIC24.41■■□□□ 1.5
Igkv3-12A0A140T8P0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv3-12A0A140T8P0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv3-12A0A140T8P0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv3-12A0A140T8P0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv3-12A0A140T8P0 Gm15042-201ENSMUST00000120212 883 ntBASIC21.62■■□□□ 1.05
Igkv3-12A0A140T8P0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Igkv3-12A0A140T8P0 Gm15045-201ENSMUST00000117359 883 ntBASIC21.12■□□□□ 0.97
Igkv3-12A0A140T8P0 Gm24109-201ENSMUST00000175489 103 ntBASIC20.99■□□□□ 0.95
Igkv3-12A0A140T8P0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv3-12A0A140T8P0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv3-12A0A140T8P0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv3-12A0A140T8P0 Psd-208ENSMUST00000224556 2034 ntBASIC20.56■□□□□ 0.88
Igkv3-12A0A140T8P0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.51■□□□□ 0.87
Igkv3-12A0A140T8P0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv3-12A0A140T8P0 Gm23366-201ENSMUST00000175022 89 ntBASIC20.47■□□□□ 0.87
Igkv3-12A0A140T8P0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv3-12A0A140T8P0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv3-12A0A140T8P0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Igkv3-12A0A140T8P0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv3-12A0A140T8P0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv3-12A0A140T8P0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv3-12A0A140T8P0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv3-12A0A140T8P0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv3-12A0A140T8P0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv3-12A0A140T8P0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv3-12A0A140T8P0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.01■□□□□ 0.79
Igkv3-12A0A140T8P0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv3-12A0A140T8P0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Igkv3-12A0A140T8P0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv3-12A0A140T8P0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.83■□□□□ 0.77
Igkv3-12A0A140T8P0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.78■□□□□ 0.76
Igkv3-12A0A140T8P0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv3-12A0A140T8P0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv3-12A0A140T8P0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv3-12A0A140T8P0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.45■□□□□ 0.7
Igkv3-12A0A140T8P0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Igkv3-12A0A140T8P0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv3-12A0A140T8P0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.4■□□□□ 0.7
Igkv3-12A0A140T8P0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv3-12A0A140T8P0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv3-12A0A140T8P0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv3-12A0A140T8P0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Igkv3-12A0A140T8P0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv3-12A0A140T8P0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv3-12A0A140T8P0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.2■□□□□ 0.66
Igkv3-12A0A140T8P0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.17■□□□□ 0.66
Igkv3-12A0A140T8P0 Gm25238-201ENSMUST00000174914 89 ntBASIC19.15■□□□□ 0.66
Igkv3-12A0A140T8P0 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.12■□□□□ 0.65
Igkv3-12A0A140T8P0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv3-12A0A140T8P0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv3-12A0A140T8P0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv3-12A0A140T8P0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv3-12A0A140T8P0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Igkv3-12A0A140T8P0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv3-12A0A140T8P0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv3-12A0A140T8P0 Gm27325-201ENSMUST00000175467 74 ntBASIC18.97■□□□□ 0.63
Igkv3-12A0A140T8P0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Igkv3-12A0A140T8P0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv3-12A0A140T8P0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.92■□□□□ 0.62
Igkv3-12A0A140T8P0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Igkv3-12A0A140T8P0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.89■□□□□ 0.61
Igkv3-12A0A140T8P0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Igkv3-12A0A140T8P0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv3-12A0A140T8P0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Igkv3-12A0A140T8P0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv3-12A0A140T8P0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Igkv3-12A0A140T8P0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv3-12A0A140T8P0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv3-12A0A140T8P0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.78■□□□□ 0.6
Igkv3-12A0A140T8P0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv3-12A0A140T8P0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv3-12A0A140T8P0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Igkv3-12A0A140T8P0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.7■□□□□ 0.58
Igkv3-12A0A140T8P0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Igkv3-12A0A140T8P0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.69■□□□□ 0.58
Igkv3-12A0A140T8P0 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.66■□□□□ 0.58
Igkv3-12A0A140T8P0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Igkv3-12A0A140T8P0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv3-12A0A140T8P0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Igkv3-12A0A140T8P0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Igkv3-12A0A140T8P0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv3-12A0A140T8P0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv3-12A0A140T8P0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.52■□□□□ 0.56
Igkv3-12A0A140T8P0 Rab21-202ENSMUST00000218831 843 ntBASIC18.49■□□□□ 0.55
Igkv3-12A0A140T8P0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv3-12A0A140T8P0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv3-12A0A140T8P0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv3-12A0A140T8P0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv3-12A0A140T8P0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.4■□□□□ 0.54
Igkv3-12A0A140T8P0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Igkv3-12A0A140T8P0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv3-12A0A140T8P0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv3-12A0A140T8P0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv3-12A0A140T8P0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv3-12A0A140T8P0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.29■□□□□ 0.52
Igkv3-12A0A140T8P0 Gm25262-201ENSMUST00000174934 133 ntBASIC18.28■□□□□ 0.52
Igkv3-12A0A140T8P0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv3-12A0A140T8P0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv3-12A0A140T8P0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms