RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 NischQ80TM9 1593 aa20.83■□□□□ 0.93
Prpf40b-202ENSMUST00000118287 Gm35339A0A140LHH9 1649 aa20.68■□□□□ 0.9
Prpf40b-202ENSMUST00000118287 Abcc9P70170 1546 aa20.17■□□□□ 0.82
Prpf40b-202ENSMUST00000118287 Abcc8B2RUS7 1588 aa19.93■□□□□ 0.78
Prpf40b-202ENSMUST00000118287 ScribQ80U72 1612 aa18.93■□□□□ 0.62
Prpf40b-202ENSMUST00000118287 Rhox8Q6VSS7 320 aa18.84■□□□□ 0.61
Prpf40b-202ENSMUST00000118287 Kdm5dQ62240 1548 aa18.44■□□□□ 0.54
Prpf40b-202ENSMUST00000118287 Rtl1Q7M732 1744 aa18.43■□□□□ 0.54
Prpf40b-202ENSMUST00000118287 Dcaf1Q80TR8 1506 aa18.36■□□□□ 0.53
Prpf40b-202ENSMUST00000118287 NacadQ5SWP3 1504 aa18.31■□□□□ 0.52
Prpf40b-202ENSMUST00000118287 Rb1cc1Q9ESK9 1588 aa18.22■□□□□ 0.51
Prpf40b-202ENSMUST00000118287 Ccdc180J3QNE4 1664 aa18.19■□□□□ 0.5
Prpf40b-202ENSMUST00000118287 Sycp2Q9CUU3 1500 aa17.95■□□□□ 0.46
Prpf40b-202ENSMUST00000118287 Baz1aO88379 1555 aa17.95■□□□□ 0.46
Prpf40b-202ENSMUST00000118287 Rpgrip1Q9EPQ2 1331 aa17.95■□□□□ 0.46
Prpf40b-202ENSMUST00000118287 Ehmt2Q9Z148 1263 aaKnown RBP17.78■□□□□ 0.44
Prpf40b-202ENSMUST00000118287 Zcchc6Q5BLK4 1491 aaKnown RBP17.76■□□□□ 0.43
Prpf40b-202ENSMUST00000118287 BicraF8VPZ9 1578 aa17.66■□□□□ 0.42
Prpf40b-202ENSMUST00000118287 Crybg2B7ZCC2 1516 aa17.64■□□□□ 0.41
Prpf40b-202ENSMUST00000118287 Acin1Q9JIX8 1338 aaKnown RBP17.62■□□□□ 0.41
Prpf40b-202ENSMUST00000118287 Ccdc136Q3TVA9 1136 aa17.56■□□□□ 0.4
Prpf40b-202ENSMUST00000118287 Smarca2Q6DIC0 1577 aa17.49■□□□□ 0.39
Prpf40b-202ENSMUST00000118287 DiexfQ8BTT6 772 aaKnown RBP17.46■□□□□ 0.39
Prpf40b-202ENSMUST00000118287 HrcG5E8J6 738 aa17.4■□□□□ 0.38
Prpf40b-202ENSMUST00000118287 Cecr2E9Q2Z1 1453 aa17.33■□□□□ 0.36
Prpf40b-202ENSMUST00000118287 Pcgf6Q99NA9 353 aa17.3■□□□□ 0.36
Prpf40b-202ENSMUST00000118287 Trim41Q5NCC3 630 aa17.09■□□□□ 0.33
Prpf40b-202ENSMUST00000118287 Smarca4Q3TKT4 1613 aaKnown RBP17.06■□□□□ 0.32
Prpf40b-202ENSMUST00000118287 Brd4Q9ESU6 1400 aaKnown RBP17.03■□□□□ 0.32
Prpf40b-202ENSMUST00000118287 Synj1Q8CHC4 1574 aa17.03■□□□□ 0.32
Prpf40b-202ENSMUST00000118287 Amer1Q7TS75 1132 aa16.98■□□□□ 0.31
Prpf40b-202ENSMUST00000118287 Pds5bQ4VA53 1446 aaKnown RBP16.96■□□□□ 0.31
Prpf40b-202ENSMUST00000118287 CftrP26361 1476 aa16.95■□□□□ 0.3
Prpf40b-202ENSMUST00000118287 Supt5hO55201 1082 aaKnown RBP16.94■□□□□ 0.3
Prpf40b-202ENSMUST00000118287 Atad2bE9Q166 1460 aaKnown RBP16.93■□□□□ 0.3
Prpf40b-202ENSMUST00000118287 Iqgap2Q3UQ44 1575 aa16.91■□□□□ 0.3
Prpf40b-202ENSMUST00000118287 Cttnbp2B9EJA2 1648 aa16.86■□□□□ 0.29
Prpf40b-202ENSMUST00000118287 Esf1Q3V1V3 845 aaKnown RBP16.86■□□□□ 0.29
Prpf40b-202ENSMUST00000118287 Cngb1E1AZ71 1325 aa16.84■□□□□ 0.29
Prpf40b-202ENSMUST00000118287 Cep164Q5DU05 1446 aa16.79■□□□□ 0.28
Prpf40b-202ENSMUST00000118287 Myt1Q8CFC2 1127 aa16.79■□□□□ 0.28
Prpf40b-202ENSMUST00000118287 Bcl11aQ9QYE3 773 aa16.76■□□□□ 0.27
Prpf40b-202ENSMUST00000118287 CenpbP27790 599 aa16.73■□□□□ 0.27
Prpf40b-202ENSMUST00000118287 Zeb1Q64318 1117 aa16.7■□□□□ 0.26
Prpf40b-202ENSMUST00000118287 Golga3P55937 1487 aa16.69■□□□□ 0.26
Prpf40b-202ENSMUST00000118287 Frmpd1A2AKB4 1549 aa16.67■□□□□ 0.26
Prpf40b-202ENSMUST00000118287 Neurod1Q60867 357 aa16.67■□□□□ 0.26
Prpf40b-202ENSMUST00000118287 Ercc6F8VPZ5 1481 aa16.66■□□□□ 0.26
Prpf40b-202ENSMUST00000118287 Wdr62Q3U3T8 1523 aa16.64■□□□□ 0.25
Prpf40b-202ENSMUST00000118287 Thoc2B1AZI6 1594 aaKnown RBP16.6■□□□□ 0.25
Prpf40b-202ENSMUST00000118287 Plppr3Q7TPB0 716 aa16.6■□□□□ 0.25
Prpf40b-202ENSMUST00000118287 Gab3Q8BSM5 595 aa16.6■□□□□ 0.25
Prpf40b-202ENSMUST00000118287 Ttbk1Q6PCN3 1308 aa16.57■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Chic1Q8CBW7 227 aa16.56■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Top2bQ64511 1612 aa16.56■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Rsf1E9PWW9 1441 aaKnown RBP16.54■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Ccdc88bQ4QRL3 1481 aa16.53■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Dnajc5bQ9CQ94 199 aa16.53■□□□□ 0.24
Prpf40b-202ENSMUST00000118287 Cc2d2aQ8CFW7 1633 aa16.51■□□□□ 0.23
Prpf40b-202ENSMUST00000118287 PrkcshO08795 521 aa16.5■□□□□ 0.23
Prpf40b-202ENSMUST00000118287 Unc13aQ4KUS2 1712 aa16.47■□□□□ 0.23
Prpf40b-202ENSMUST00000118287 Mier1Q5UAK0 511 aa16.39■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Phldb1Q6PDH0 1371 aaKnown RBP16.39■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Sall2Q9QX96 1004 aa16.36■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Las1lA2BE28 776 aaKnown RBP16.34■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 NefmP08553 848 aa16.34■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Ubl4bQ9CQ84 188 aa16.34■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Fmn1Q05860 1466 aa16.34■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Kif15Q6P9L6 1387 aa16.33■□□□□ 0.21
Prpf40b-202ENSMUST00000118287 Fam135aQ6NS59 1506 aa16.33■□□□□ 0.2
Prpf40b-202ENSMUST00000118287 Il27Q8K3I6 234 aa16.26■□□□□ 0.19
Prpf40b-202ENSMUST00000118287 Lamc3Q9R0B6 1581 aa16.26■□□□□ 0.19
Prpf40b-202ENSMUST00000118287 TnnQ80Z71 1560 aa16.24■□□□□ 0.19
Prpf40b-202ENSMUST00000118287 CatipB9EKE5 520 aa16.2■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Wdr66E9Q743 1299 aa16.19■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Top2aQ01320 1528 aaKnown RBP16.17■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Cux2P70298 1426 aa16.17■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Csrnp3P59055 597 aa16.17■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Ube2uB1AUC4 352 aa16.15■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 1700123L14RikQ3V2K7 440 aa16.15■□□□□ 0.18
Prpf40b-202ENSMUST00000118287 Ppargc1bQ8VHJ7 1014 aa16.14■□□□□ 0.17
Prpf40b-202ENSMUST00000118287 UbtfP25976 765 aaKnown RBP16.12■□□□□ 0.17
Prpf40b-202ENSMUST00000118287 Anks4bQ8K3X6 423 aa16.1■□□□□ 0.17
Prpf40b-202ENSMUST00000118287 Camsap1A2AHC3 1581 aa16.09■□□□□ 0.17
Prpf40b-202ENSMUST00000118287 Aebp2Q9Z248 504 aaKnown RBP16.07■□□□□ 0.16
Prpf40b-202ENSMUST00000118287 Npm1Q61937 292 aaKnown RBP16.06■□□□□ 0.16
Prpf40b-202ENSMUST00000118287 Ccdc18Q640L5 1455 aa16.05■□□□□ 0.16
Prpf40b-202ENSMUST00000118287 Mrc2Q64449 1479 aa16.01■□□□□ 0.15
Prpf40b-202ENSMUST00000118287 Npm2Q80W85 207 aa16■□□□□ 0.15
Prpf40b-202ENSMUST00000118287 PtprkP35822 1457 aa15.97■□□□□ 0.15
Prpf40b-202ENSMUST00000118287 Cdk11bP24788 784 aaKnown RBP15.96■□□□□ 0.15
Prpf40b-202ENSMUST00000118287 Rapgef2Q8CHG7 1496 aa15.96■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 Nop58Q6DFW4 536 aaKnown RBP15.95■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 Grin2bQ01097 1482 aa15.93■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 Myt1lP97500 1187 aa15.92■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 LrpprcQ6PB66 1392 aaKnown RBP15.91■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 Kif21aQ9QXL2 1672 aa15.9■□□□□ 0.14
Prpf40b-202ENSMUST00000118287 Baz1bQ9Z277 1479 aa15.89■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 Gm38655A0A286YDK6 273 aa15.89■□□□□ 0.13
Prpf40b-202ENSMUST00000118287 Cep162Q6ZQ06 1403 aa15.87■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms