Protein–RNA interactions for Protein: Q3URG9

Gm10643, Predicted gene 10643, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10643Q3URG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm10643Q3URG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10643Q3URG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm10643Q3URG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm10643Q3URG9 Psd-208ENSMUST00000224556 2034 ntBASIC17.92■□□□□ 0.46
Gm10643Q3URG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10643Q3URG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Gm10643Q3URG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Gm10643Q3URG9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm10643Q3URG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm10643Q3URG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm10643Q3URG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm10643Q3URG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm10643Q3URG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm10643Q3URG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm10643Q3URG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm10643Q3URG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm10643Q3URG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm10643Q3URG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm10643Q3URG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm10643Q3URG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm10643Q3URG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm10643Q3URG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm10643Q3URG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10643Q3URG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10643Q3URG9 Gm25239-201ENSMUST00000174915 86 ntBASIC16.55■□□□□ 0.24
Gm10643Q3URG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gm10643Q3URG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.48■□□□□ 0.23
Gm10643Q3URG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm10643Q3URG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm10643Q3URG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm10643Q3URG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC16.18■□□□□ 0.18
Gm10643Q3URG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm10643Q3URG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm10643Q3URG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm10643Q3URG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gm10643Q3URG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm10643Q3URG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm10643Q3URG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm10643Q3URG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gm10643Q3URG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC16.02■□□□□ 0.16
Gm10643Q3URG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm10643Q3URG9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Gm10643Q3URG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Gm10643Q3URG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm10643Q3URG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm10643Q3URG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.92■□□□□ 0.14
Gm10643Q3URG9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm10643Q3URG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm10643Q3URG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm10643Q3URG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10643Q3URG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm10643Q3URG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC15.79■□□□□ 0.12
Gm10643Q3URG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Gm10643Q3URG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10643Q3URG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm10643Q3URG9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm10643Q3URG9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gm10643Q3URG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm10643Q3URG9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm10643Q3URG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm10643Q3URG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC15.6■□□□□ 0.09
Gm10643Q3URG9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Gm10643Q3URG9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm10643Q3URG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Zxda-201ENSMUST00000117281 2621 ntBASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC15.53■□□□□ 0.08
Gm10643Q3URG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Gm10643Q3URG9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm10643Q3URG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm10643Q3URG9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm10643Q3URG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Gm10643Q3URG9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC15.42■□□□□ 0.06
Gm10643Q3URG9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm10643Q3URG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm10643Q3URG9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gm10643Q3URG9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm10643Q3URG9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm10643Q3URG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm10643Q3URG9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm10643Q3URG9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm10643Q3URG9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm10643Q3URG9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm10643Q3URG9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm10643Q3URG9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm10643Q3URG9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10643Q3URG9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10643Q3URG9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10643Q3URG9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10643Q3URG9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10643Q3URG9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10643Q3URG9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10643Q3URG9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10643Q3URG9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10643Q3URG9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms