Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Gm25239-201ENSMUST00000174915 86 ntBASIC26.27■■□□□ 1.8
Igkv4-54A0A0G2JES9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv4-54A0A0G2JES9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Igkv4-54A0A0G2JES9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Igkv4-54A0A0G2JES9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Igkv4-54A0A0G2JES9 Gm15042-201ENSMUST00000120212 883 ntBASIC23.23■■□□□ 1.31
Igkv4-54A0A0G2JES9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Igkv4-54A0A0G2JES9 Gm15045-201ENSMUST00000117359 883 ntBASIC22.73■■□□□ 1.23
Igkv4-54A0A0G2JES9 Gm24109-201ENSMUST00000175489 103 ntBASIC22.64■■□□□ 1.21
Igkv4-54A0A0G2JES9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv4-54A0A0G2JES9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv4-54A0A0G2JES9 Psd-208ENSMUST00000224556 2034 ntBASIC22.15■■□□□ 1.14
Igkv4-54A0A0G2JES9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv4-54A0A0G2JES9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.05■■□□□ 1.12
Igkv4-54A0A0G2JES9 Gm23366-201ENSMUST00000175022 89 ntBASIC21.99■■□□□ 1.11
Igkv4-54A0A0G2JES9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv4-54A0A0G2JES9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Igkv4-54A0A0G2JES9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Igkv4-54A0A0G2JES9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv4-54A0A0G2JES9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv4-54A0A0G2JES9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv4-54A0A0G2JES9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv4-54A0A0G2JES9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv4-54A0A0G2JES9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Igkv4-54A0A0G2JES9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv4-54A0A0G2JES9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.48■■□□□ 1.03
Igkv4-54A0A0G2JES9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv4-54A0A0G2JES9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv4-54A0A0G2JES9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv4-54A0A0G2JES9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Igkv4-54A0A0G2JES9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.32■■□□□ 1
Igkv4-54A0A0G2JES9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igkv4-54A0A0G2JES9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.21■□□□□ 0.99
Igkv4-54A0A0G2JES9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv4-54A0A0G2JES9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv4-54A0A0G2JES9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.96■□□□□ 0.95
Igkv4-54A0A0G2JES9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv4-54A0A0G2JES9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-54A0A0G2JES9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv4-54A0A0G2JES9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.83■□□□□ 0.92
Igkv4-54A0A0G2JES9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Igkv4-54A0A0G2JES9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Igkv4-54A0A0G2JES9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-54A0A0G2JES9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv4-54A0A0G2JES9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv4-54A0A0G2JES9 Gm25238-201ENSMUST00000174914 89 ntBASIC20.64■□□□□ 0.89
Igkv4-54A0A0G2JES9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.64■□□□□ 0.89
Igkv4-54A0A0G2JES9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.63■□□□□ 0.89
Igkv4-54A0A0G2JES9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv4-54A0A0G2JES9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv4-54A0A0G2JES9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv4-54A0A0G2JES9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv4-54A0A0G2JES9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv4-54A0A0G2JES9 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.5■□□□□ 0.87
Igkv4-54A0A0G2JES9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv4-54A0A0G2JES9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Igkv4-54A0A0G2JES9 Gm27325-201ENSMUST00000175467 74 ntBASIC20.38■□□□□ 0.85
Igkv4-54A0A0G2JES9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Igkv4-54A0A0G2JES9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Igkv4-54A0A0G2JES9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.33■□□□□ 0.85
Igkv4-54A0A0G2JES9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv4-54A0A0G2JES9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv4-54A0A0G2JES9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igkv4-54A0A0G2JES9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.29■□□□□ 0.84
Igkv4-54A0A0G2JES9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Igkv4-54A0A0G2JES9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Igkv4-54A0A0G2JES9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Igkv4-54A0A0G2JES9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Igkv4-54A0A0G2JES9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.17■□□□□ 0.82
Igkv4-54A0A0G2JES9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-54A0A0G2JES9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv4-54A0A0G2JES9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv4-54A0A0G2JES9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv4-54A0A0G2JES9 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.08■□□□□ 0.81
Igkv4-54A0A0G2JES9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Igkv4-54A0A0G2JES9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv4-54A0A0G2JES9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv4-54A0A0G2JES9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv4-54A0A0G2JES9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.06■□□□□ 0.8
Igkv4-54A0A0G2JES9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.06■□□□□ 0.8
Igkv4-54A0A0G2JES9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-54A0A0G2JES9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Igkv4-54A0A0G2JES9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Igkv4-54A0A0G2JES9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Igkv4-54A0A0G2JES9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.89■□□□□ 0.77
Igkv4-54A0A0G2JES9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-54A0A0G2JES9 Rab21-202ENSMUST00000218831 843 ntBASIC19.86■□□□□ 0.77
Igkv4-54A0A0G2JES9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-54A0A0G2JES9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Igkv4-54A0A0G2JES9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.76■□□□□ 0.75
Igkv4-54A0A0G2JES9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.73■□□□□ 0.75
Igkv4-54A0A0G2JES9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv4-54A0A0G2JES9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Igkv4-54A0A0G2JES9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv4-54A0A0G2JES9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv4-54A0A0G2JES9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv4-54A0A0G2JES9 Gm25262-201ENSMUST00000174934 133 ntBASIC19.67■□□□□ 0.74
Igkv4-54A0A0G2JES9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.66■□□□□ 0.74
Igkv4-54A0A0G2JES9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv4-54A0A0G2JES9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms