Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Gm25239-201ENSMUST00000174915 86 ntBASIC26,27■■□□□ 1,8
Igkv4-54A0A0G2JES9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Igkv4-54A0A0G2JES9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,93■■□□□ 1,42
Igkv4-54A0A0G2JES9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,88■■□□□ 1,41
Igkv4-54A0A0G2JES9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Igkv4-54A0A0G2JES9 Gm15042-201ENSMUST00000120212 883 ntBASIC23,23■■□□□ 1,31
Igkv4-54A0A0G2JES9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,11■■□□□ 1,29
Igkv4-54A0A0G2JES9 Gm15045-201ENSMUST00000117359 883 ntBASIC22,73■■□□□ 1,23
Igkv4-54A0A0G2JES9 Gm24109-201ENSMUST00000175489 103 ntBASIC22,64■■□□□ 1,21
Igkv4-54A0A0G2JES9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,44■■□□□ 1,18
Igkv4-54A0A0G2JES9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Igkv4-54A0A0G2JES9 Psd-208ENSMUST00000224556 2034 ntBASIC22,15■■□□□ 1,14
Igkv4-54A0A0G2JES9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,15■■□□□ 1,14
Igkv4-54A0A0G2JES9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,05■■□□□ 1,12
Igkv4-54A0A0G2JES9 Gm23366-201ENSMUST00000175022 89 ntBASIC21,99■■□□□ 1,11
Igkv4-54A0A0G2JES9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,98■■□□□ 1,11
Igkv4-54A0A0G2JES9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,9■■□□□ 1,1
Igkv4-54A0A0G2JES9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Igkv4-54A0A0G2JES9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,86■■□□□ 1,09
Igkv4-54A0A0G2JES9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,75■■□□□ 1,07
Igkv4-54A0A0G2JES9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Igkv4-54A0A0G2JES9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
Igkv4-54A0A0G2JES9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,61■■□□□ 1,05
Igkv4-54A0A0G2JES9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,6■■□□□ 1,05
Igkv4-54A0A0G2JES9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,56■■□□□ 1,04
Igkv4-54A0A0G2JES9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,48■■□□□ 1,03
Igkv4-54A0A0G2JES9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Igkv4-54A0A0G2JES9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Igkv4-54A0A0G2JES9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Igkv4-54A0A0G2JES9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,37■■□□□ 1,01
Igkv4-54A0A0G2JES9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,32■■□□□ 1
Igkv4-54A0A0G2JES9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Igkv4-54A0A0G2JES9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,21■□□□□ 0,99
Igkv4-54A0A0G2JES9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,12■□□□□ 0,97
Igkv4-54A0A0G2JES9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Igkv4-54A0A0G2JES9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20,96■□□□□ 0,95
Igkv4-54A0A0G2JES9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,9■□□□□ 0,94
Igkv4-54A0A0G2JES9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,89■□□□□ 0,93
Igkv4-54A0A0G2JES9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,86■□□□□ 0,93
Igkv4-54A0A0G2JES9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,83■□□□□ 0,92
Igkv4-54A0A0G2JES9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Igkv4-54A0A0G2JES9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20,77■□□□□ 0,92
Igkv4-54A0A0G2JES9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,77■□□□□ 0,92
Igkv4-54A0A0G2JES9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Igkv4-54A0A0G2JES9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Igkv4-54A0A0G2JES9 Gm25238-201ENSMUST00000174914 89 ntBASIC20,64■□□□□ 0,89
Igkv4-54A0A0G2JES9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,64■□□□□ 0,89
Igkv4-54A0A0G2JES9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20,63■□□□□ 0,89
Igkv4-54A0A0G2JES9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20,62■□□□□ 0,89
Igkv4-54A0A0G2JES9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,57■□□□□ 0,88
Igkv4-54A0A0G2JES9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,56■□□□□ 0,88
Igkv4-54A0A0G2JES9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,54■□□□□ 0,88
Igkv4-54A0A0G2JES9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Igkv4-54A0A0G2JES9 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,5■□□□□ 0,87
Igkv4-54A0A0G2JES9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Igkv4-54A0A0G2JES9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,42■□□□□ 0,86
Igkv4-54A0A0G2JES9 Gm27325-201ENSMUST00000175467 74 ntBASIC20,38■□□□□ 0,85
Igkv4-54A0A0G2JES9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,38■□□□□ 0,85
Igkv4-54A0A0G2JES9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,34■□□□□ 0,85
Igkv4-54A0A0G2JES9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,33■□□□□ 0,85
Igkv4-54A0A0G2JES9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Igkv4-54A0A0G2JES9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Igkv4-54A0A0G2JES9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20,29■□□□□ 0,84
Igkv4-54A0A0G2JES9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,29■□□□□ 0,84
Igkv4-54A0A0G2JES9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20,27■□□□□ 0,84
Igkv4-54A0A0G2JES9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,27■□□□□ 0,83
Igkv4-54A0A0G2JES9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,23■□□□□ 0,83
Igkv4-54A0A0G2JES9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,2■□□□□ 0,82
Igkv4-54A0A0G2JES9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,17■□□□□ 0,82
Igkv4-54A0A0G2JES9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,17■□□□□ 0,82
Igkv4-54A0A0G2JES9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Igkv4-54A0A0G2JES9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Igkv4-54A0A0G2JES9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20,1■□□□□ 0,81
Igkv4-54A0A0G2JES9 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,08■□□□□ 0,81
Igkv4-54A0A0G2JES9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20,08■□□□□ 0,81
Igkv4-54A0A0G2JES9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,07■□□□□ 0,8
Igkv4-54A0A0G2JES9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,07■□□□□ 0,8
Igkv4-54A0A0G2JES9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,06■□□□□ 0,8
Igkv4-54A0A0G2JES9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20,06■□□□□ 0,8
Igkv4-54A0A0G2JES9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20,06■□□□□ 0,8
Igkv4-54A0A0G2JES9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,05■□□□□ 0,8
Igkv4-54A0A0G2JES9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19,95■□□□□ 0,78
Igkv4-54A0A0G2JES9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,9■□□□□ 0,78
Igkv4-54A0A0G2JES9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19,89■□□□□ 0,77
Igkv4-54A0A0G2JES9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,89■□□□□ 0,77
Igkv4-54A0A0G2JES9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Igkv4-54A0A0G2JES9 Rab21-202ENSMUST00000218831 843 ntBASIC19,86■□□□□ 0,77
Igkv4-54A0A0G2JES9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Igkv4-54A0A0G2JES9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,8■□□□□ 0,76
Igkv4-54A0A0G2JES9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19,76■□□□□ 0,75
Igkv4-54A0A0G2JES9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,73■□□□□ 0,75
Igkv4-54A0A0G2JES9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Igkv4-54A0A0G2JES9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Igkv4-54A0A0G2JES9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Igkv4-54A0A0G2JES9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,68■□□□□ 0,74
Igkv4-54A0A0G2JES9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,67■□□□□ 0,74
Igkv4-54A0A0G2JES9 Gm25262-201ENSMUST00000174934 133 ntBASIC19,67■□□□□ 0,74
Igkv4-54A0A0G2JES9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19,66■□□□□ 0,74
Igkv4-54A0A0G2JES9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Igkv4-54A0A0G2JES9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19,65■□□□□ 0,74
Retrieved 100 of 76,532 protein–RNA pairs in 13,1 ms