Protein–RNA interactions for Protein: F6S692

Gm3646, MCG1026732, mousemouse

Predictions only

Length 53 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3646F6S692 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3646F6S692 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm3646F6S692 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3646F6S692 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gm3646F6S692 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm3646F6S692 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm3646F6S692 Psd-208ENSMUST00000224556 2034 ntBASIC16.63■□□□□ 0.25
Gm3646F6S692 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm3646F6S692 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm3646F6S692 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3646F6S692 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm3646F6S692 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm3646F6S692 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3646F6S692 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3646F6S692 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3646F6S692 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3646F6S692 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3646F6S692 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3646F6S692 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Gm3646F6S692 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Gm3646F6S692 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Gm3646F6S692 Gm42596-201ENSMUST00000196305 1958 ntBASIC15.9■□□□□ 0.14
Gm3646F6S692 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm3646F6S692 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm3646F6S692 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Gm3646F6S692 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm3646F6S692 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3646F6S692 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3646F6S692 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Gm3646F6S692 Zxda-201ENSMUST00000117281 2621 ntBASIC15.53■□□□□ 0.08
Gm3646F6S692 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC15.46■□□□□ 0.07
Gm3646F6S692 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3646F6S692 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm3646F6S692 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3646F6S692 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm3646F6S692 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.36■□□□□ 0.05
Gm3646F6S692 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Gm3646F6S692 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm3646F6S692 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3646F6S692 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3646F6S692 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm3646F6S692 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm3646F6S692 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3646F6S692 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm3646F6S692 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm3646F6S692 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm3646F6S692 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3646F6S692 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3646F6S692 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3646F6S692 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3646F6S692 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Gm3646F6S692 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC15□□□□□ -0.01
Gm3646F6S692 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Gm3646F6S692 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Gm3646F6S692 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Gm3646F6S692 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm3646F6S692 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm3646F6S692 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm3646F6S692 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm3646F6S692 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm3646F6S692 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Gm3646F6S692 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3646F6S692 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gm3646F6S692 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC14.83□□□□□ -0.04
Gm3646F6S692 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Gm3646F6S692 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm3646F6S692 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3646F6S692 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm3646F6S692 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3646F6S692 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm3646F6S692 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3646F6S692 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Gm3646F6S692 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Gm3646F6S692 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Gm3646F6S692 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Gm3646F6S692 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Gm3646F6S692 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Gm3646F6S692 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Gm3646F6S692 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm3646F6S692 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC14.62□□□□□ -0.07
Gm3646F6S692 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3646F6S692 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3646F6S692 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3646F6S692 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm3646F6S692 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3646F6S692 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm3646F6S692 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm3646F6S692 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Gm3646F6S692 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Gm3646F6S692 AC153504.1-201ENSMUST00000218379 2290 ntBASIC14.48□□□□□ -0.09
Gm3646F6S692 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3646F6S692 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Gm3646F6S692 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gm3646F6S692 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3646F6S692 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm3646F6S692 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3646F6S692 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3646F6S692 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3646F6S692 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3646F6S692 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms