Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Gm25239-201ENSMUST00000174915 86 ntBASIC25.23■■□□□ 1.63
Igkv4-53A0A0G2JFC6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Igkv4-53A0A0G2JFC6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv4-53A0A0G2JFC6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv4-53A0A0G2JFC6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Igkv4-53A0A0G2JFC6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Igkv4-53A0A0G2JFC6 Gm15042-201ENSMUST00000120212 883 ntBASIC22.43■■□□□ 1.18
Igkv4-53A0A0G2JFC6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv4-53A0A0G2JFC6 Psd-208ENSMUST00000224556 2034 ntBASIC22.06■■□□□ 1.12
Igkv4-53A0A0G2JFC6 Gm15045-201ENSMUST00000117359 883 ntBASIC22■■□□□ 1.11
Igkv4-53A0A0G2JFC6 Gm24109-201ENSMUST00000175489 103 ntBASIC21.7■■□□□ 1.06
Igkv4-53A0A0G2JFC6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv4-53A0A0G2JFC6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.61■■□□□ 1.05
Igkv4-53A0A0G2JFC6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Igkv4-53A0A0G2JFC6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv4-53A0A0G2JFC6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv4-53A0A0G2JFC6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv4-53A0A0G2JFC6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv4-53A0A0G2JFC6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-53A0A0G2JFC6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv4-53A0A0G2JFC6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igkv4-53A0A0G2JFC6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv4-53A0A0G2JFC6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv4-53A0A0G2JFC6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igkv4-53A0A0G2JFC6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.12■□□□□ 0.97
Igkv4-53A0A0G2JFC6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-53A0A0G2JFC6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.03■□□□□ 0.96
Igkv4-53A0A0G2JFC6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv4-53A0A0G2JFC6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv4-53A0A0G2JFC6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv4-53A0A0G2JFC6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Igkv4-53A0A0G2JFC6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv4-53A0A0G2JFC6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.81■□□□□ 0.92
Igkv4-53A0A0G2JFC6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv4-53A0A0G2JFC6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv4-53A0A0G2JFC6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Igkv4-53A0A0G2JFC6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Igkv4-53A0A0G2JFC6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.58■□□□□ 0.89
Igkv4-53A0A0G2JFC6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Igkv4-53A0A0G2JFC6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv4-53A0A0G2JFC6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv4-53A0A0G2JFC6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv4-53A0A0G2JFC6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.43■□□□□ 0.86
Igkv4-53A0A0G2JFC6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Igkv4-53A0A0G2JFC6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Igkv4-53A0A0G2JFC6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.29■□□□□ 0.84
Igkv4-53A0A0G2JFC6 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.24■□□□□ 0.83
Igkv4-53A0A0G2JFC6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-53A0A0G2JFC6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv4-53A0A0G2JFC6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv4-53A0A0G2JFC6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv4-53A0A0G2JFC6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Igkv4-53A0A0G2JFC6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv4-53A0A0G2JFC6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.05■□□□□ 0.8
Igkv4-53A0A0G2JFC6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv4-53A0A0G2JFC6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Igkv4-53A0A0G2JFC6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Igkv4-53A0A0G2JFC6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Igkv4-53A0A0G2JFC6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-53A0A0G2JFC6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Igkv4-53A0A0G2JFC6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Igkv4-53A0A0G2JFC6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.84■□□□□ 0.77
Igkv4-53A0A0G2JFC6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Igkv4-53A0A0G2JFC6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Igkv4-53A0A0G2JFC6 Gm25238-201ENSMUST00000174914 89 ntBASIC19.79■□□□□ 0.76
Igkv4-53A0A0G2JFC6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Igkv4-53A0A0G2JFC6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.75■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.72■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Gm27325-201ENSMUST00000175467 74 ntBASIC19.72■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.71■□□□□ 0.75
Igkv4-53A0A0G2JFC6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.69■□□□□ 0.74
Igkv4-53A0A0G2JFC6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv4-53A0A0G2JFC6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv4-53A0A0G2JFC6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv4-53A0A0G2JFC6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Igkv4-53A0A0G2JFC6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv4-53A0A0G2JFC6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv4-53A0A0G2JFC6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.57■□□□□ 0.72
Igkv4-53A0A0G2JFC6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv4-53A0A0G2JFC6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv4-53A0A0G2JFC6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Igkv4-53A0A0G2JFC6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Igkv4-53A0A0G2JFC6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Igkv4-53A0A0G2JFC6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv4-53A0A0G2JFC6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv4-53A0A0G2JFC6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Igkv4-53A0A0G2JFC6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv4-53A0A0G2JFC6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv4-53A0A0G2JFC6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv4-53A0A0G2JFC6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv4-53A0A0G2JFC6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-53A0A0G2JFC6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-53A0A0G2JFC6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.3■□□□□ 0.68
Igkv4-53A0A0G2JFC6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-53A0A0G2JFC6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.28■□□□□ 0.68
Igkv4-53A0A0G2JFC6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-53A0A0G2JFC6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms