Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Gm25239-201ENSMUST00000174915 86 ntBASIC25,23■■□□□ 1,63
Igkv4-53A0A0G2JFC6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,74■■□□□ 1,39
Igkv4-53A0A0G2JFC6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,15■■□□□ 1,3
Igkv4-53A0A0G2JFC6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Igkv4-53A0A0G2JFC6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22,91■■□□□ 1,26
Igkv4-53A0A0G2JFC6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Igkv4-53A0A0G2JFC6 Gm15042-201ENSMUST00000120212 883 ntBASIC22,43■■□□□ 1,18
Igkv4-53A0A0G2JFC6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,12
Igkv4-53A0A0G2JFC6 Psd-208ENSMUST00000224556 2034 ntBASIC22,06■■□□□ 1,12
Igkv4-53A0A0G2JFC6 Gm15045-201ENSMUST00000117359 883 ntBASIC22■■□□□ 1,11
Igkv4-53A0A0G2JFC6 Gm24109-201ENSMUST00000175489 103 ntBASIC21,7■■□□□ 1,06
Igkv4-53A0A0G2JFC6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Igkv4-53A0A0G2JFC6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,61■■□□□ 1,05
Igkv4-53A0A0G2JFC6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Igkv4-53A0A0G2JFC6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Igkv4-53A0A0G2JFC6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Igkv4-53A0A0G2JFC6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Igkv4-53A0A0G2JFC6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Igkv4-53A0A0G2JFC6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,2■□□□□ 0,98
Igkv4-53A0A0G2JFC6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,19■□□□□ 0,98
Igkv4-53A0A0G2JFC6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Igkv4-53A0A0G2JFC6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,15■□□□□ 0,98
Igkv4-53A0A0G2JFC6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,97
Igkv4-53A0A0G2JFC6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Igkv4-53A0A0G2JFC6 Gm23366-201ENSMUST00000175022 89 ntBASIC21,12■□□□□ 0,97
Igkv4-53A0A0G2JFC6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,09■□□□□ 0,97
Igkv4-53A0A0G2JFC6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,03■□□□□ 0,96
Igkv4-53A0A0G2JFC6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,02■□□□□ 0,96
Igkv4-53A0A0G2JFC6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Igkv4-53A0A0G2JFC6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,95■□□□□ 0,94
Igkv4-53A0A0G2JFC6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Igkv4-53A0A0G2JFC6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,87■□□□□ 0,93
Igkv4-53A0A0G2JFC6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20,81■□□□□ 0,92
Igkv4-53A0A0G2JFC6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20,8■□□□□ 0,92
Igkv4-53A0A0G2JFC6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,79■□□□□ 0,92
Igkv4-53A0A0G2JFC6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,9
Igkv4-53A0A0G2JFC6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20,6■□□□□ 0,89
Igkv4-53A0A0G2JFC6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20,58■□□□□ 0,89
Igkv4-53A0A0G2JFC6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20,57■□□□□ 0,88
Igkv4-53A0A0G2JFC6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Igkv4-53A0A0G2JFC6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Igkv4-53A0A0G2JFC6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,49■□□□□ 0,87
Igkv4-53A0A0G2JFC6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,43■□□□□ 0,86
Igkv4-53A0A0G2JFC6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,43■□□□□ 0,86
Igkv4-53A0A0G2JFC6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,84
Igkv4-53A0A0G2JFC6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,29■□□□□ 0,84
Igkv4-53A0A0G2JFC6 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,24■□□□□ 0,83
Igkv4-53A0A0G2JFC6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,24■□□□□ 0,83
Igkv4-53A0A0G2JFC6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,23■□□□□ 0,83
Igkv4-53A0A0G2JFC6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,19■□□□□ 0,82
Igkv4-53A0A0G2JFC6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,13■□□□□ 0,81
Igkv4-53A0A0G2JFC6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20,11■□□□□ 0,81
Igkv4-53A0A0G2JFC6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,07■□□□□ 0,8
Igkv4-53A0A0G2JFC6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20,05■□□□□ 0,8
Igkv4-53A0A0G2JFC6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,04■□□□□ 0,8
Igkv4-53A0A0G2JFC6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
Igkv4-53A0A0G2JFC6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19,95■□□□□ 0,78
Igkv4-53A0A0G2JFC6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19,92■□□□□ 0,78
Igkv4-53A0A0G2JFC6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Igkv4-53A0A0G2JFC6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Igkv4-53A0A0G2JFC6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19,85■□□□□ 0,77
Igkv4-53A0A0G2JFC6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19,84■□□□□ 0,77
Igkv4-53A0A0G2JFC6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Igkv4-53A0A0G2JFC6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19,8■□□□□ 0,76
Igkv4-53A0A0G2JFC6 Gm25238-201ENSMUST00000174914 89 ntBASIC19,79■□□□□ 0,76
Igkv4-53A0A0G2JFC6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19,78■□□□□ 0,76
Igkv4-53A0A0G2JFC6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19,76■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19,76■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19,76■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Gm42596-201ENSMUST00000196305 1958 ntBASIC19,75■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19,72■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Gm27325-201ENSMUST00000175467 74 ntBASIC19,72■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19,71■□□□□ 0,75
Igkv4-53A0A0G2JFC6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,69■□□□□ 0,74
Igkv4-53A0A0G2JFC6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,73
Igkv4-53A0A0G2JFC6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Igkv4-53A0A0G2JFC6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Igkv4-53A0A0G2JFC6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19,61■□□□□ 0,73
Igkv4-53A0A0G2JFC6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19,61■□□□□ 0,73
Igkv4-53A0A0G2JFC6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Igkv4-53A0A0G2JFC6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19,57■□□□□ 0,72
Igkv4-53A0A0G2JFC6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19,55■□□□□ 0,72
Igkv4-53A0A0G2JFC6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Igkv4-53A0A0G2JFC6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19,46■□□□□ 0,71
Igkv4-53A0A0G2JFC6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,45■□□□□ 0,7
Igkv4-53A0A0G2JFC6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19,43■□□□□ 0,7
Igkv4-53A0A0G2JFC6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Igkv4-53A0A0G2JFC6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Igkv4-53A0A0G2JFC6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19,41■□□□□ 0,7
Igkv4-53A0A0G2JFC6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19,4■□□□□ 0,7
Igkv4-53A0A0G2JFC6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Igkv4-53A0A0G2JFC6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Igkv4-53A0A0G2JFC6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19,35■□□□□ 0,69
Igkv4-53A0A0G2JFC6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,32■□□□□ 0,68
Igkv4-53A0A0G2JFC6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,3■□□□□ 0,68
Igkv4-53A0A0G2JFC6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,3■□□□□ 0,68
Igkv4-53A0A0G2JFC6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Igkv4-53A0A0G2JFC6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19,28■□□□□ 0,68
Igkv4-53A0A0G2JFC6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Igkv4-53A0A0G2JFC6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms