Protein–RNA interactions for Protein: A0A0B4J1I4

Igkv4-72, Immunoglobulin kappa chain variable 4-72 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-72A0A0B4J1I4 Gm25239-201ENSMUST00000174915 86 ntBASIC26,03■■□□□ 1,76
Igkv4-72A0A0B4J1I4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,94■■□□□ 1,42
Igkv4-72A0A0B4J1I4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,92■■□□□ 1,42
Igkv4-72A0A0B4J1I4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,64■■□□□ 1,37
Igkv4-72A0A0B4J1I4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Igkv4-72A0A0B4J1I4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,15■■□□□ 1,3
Igkv4-72A0A0B4J1I4 Gm15042-201ENSMUST00000120212 883 ntBASIC23,07■■□□□ 1,28
Igkv4-72A0A0B4J1I4 Gm15045-201ENSMUST00000117359 883 ntBASIC22,59■■□□□ 1,21
Igkv4-72A0A0B4J1I4 Gm24109-201ENSMUST00000175489 103 ntBASIC22,39■■□□□ 1,17
Igkv4-72A0A0B4J1I4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Igkv4-72A0A0B4J1I4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Igkv4-72A0A0B4J1I4 Psd-208ENSMUST00000224556 2034 ntBASIC22,27■■□□□ 1,16
Igkv4-72A0A0B4J1I4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22■■□□□ 1,11
Igkv4-72A0A0B4J1I4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
Igkv4-72A0A0B4J1I4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,92■■□□□ 1,1
Igkv4-72A0A0B4J1I4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Igkv4-72A0A0B4J1I4 Gm23366-201ENSMUST00000175022 89 ntBASIC21,81■■□□□ 1,08
Igkv4-72A0A0B4J1I4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,79■■□□□ 1,08
Igkv4-72A0A0B4J1I4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Igkv4-72A0A0B4J1I4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Igkv4-72A0A0B4J1I4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Igkv4-72A0A0B4J1I4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,53■■□□□ 1,04
Igkv4-72A0A0B4J1I4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,53■■□□□ 1,04
Igkv4-72A0A0B4J1I4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,51■■□□□ 1,03
Igkv4-72A0A0B4J1I4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Igkv4-72A0A0B4J1I4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Igkv4-72A0A0B4J1I4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,44■■□□□ 1,02
Igkv4-72A0A0B4J1I4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Igkv4-72A0A0B4J1I4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Igkv4-72A0A0B4J1I4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Igkv4-72A0A0B4J1I4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Igkv4-72A0A0B4J1I4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,23■□□□□ 0,99
Igkv4-72A0A0B4J1I4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,19■□□□□ 0,98
Igkv4-72A0A0B4J1I4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Igkv4-72A0A0B4J1I4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,16■□□□□ 0,98
Igkv4-72A0A0B4J1I4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,08■□□□□ 0,97
Igkv4-72A0A0B4J1I4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Igkv4-72A0A0B4J1I4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Igkv4-72A0A0B4J1I4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,84■□□□□ 0,93
Igkv4-72A0A0B4J1I4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,81■□□□□ 0,92
Igkv4-72A0A0B4J1I4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,7■□□□□ 0,9
Igkv4-72A0A0B4J1I4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,7■□□□□ 0,9
Igkv4-72A0A0B4J1I4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20,7■□□□□ 0,9
Igkv4-72A0A0B4J1I4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,58■□□□□ 0,89
Igkv4-72A0A0B4J1I4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,57■□□□□ 0,88
Igkv4-72A0A0B4J1I4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,55■□□□□ 0,88
Igkv4-72A0A0B4J1I4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,54■□□□□ 0,88
Igkv4-72A0A0B4J1I4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,53■□□□□ 0,88
Igkv4-72A0A0B4J1I4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20,52■□□□□ 0,88
Igkv4-72A0A0B4J1I4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,51■□□□□ 0,87
Igkv4-72A0A0B4J1I4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Igkv4-72A0A0B4J1I4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,44■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,43■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20,42■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Gm25238-201ENSMUST00000174914 89 ntBASIC20,42■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,4■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20,4■□□□□ 0,86
Igkv4-72A0A0B4J1I4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,35■□□□□ 0,85
Igkv4-72A0A0B4J1I4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20,35■□□□□ 0,85
Igkv4-72A0A0B4J1I4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,32■□□□□ 0,84
Igkv4-72A0A0B4J1I4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,32■□□□□ 0,84
Igkv4-72A0A0B4J1I4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20,32■□□□□ 0,84
Igkv4-72A0A0B4J1I4 Gm27325-201ENSMUST00000175467 74 ntBASIC20,26■□□□□ 0,83
Igkv4-72A0A0B4J1I4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,23■□□□□ 0,83
Igkv4-72A0A0B4J1I4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,19■□□□□ 0,82
Igkv4-72A0A0B4J1I4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,19■□□□□ 0,82
Igkv4-72A0A0B4J1I4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,17■□□□□ 0,82
Igkv4-72A0A0B4J1I4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,16■□□□□ 0,82
Igkv4-72A0A0B4J1I4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Igkv4-72A0A0B4J1I4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,15■□□□□ 0,82
Igkv4-72A0A0B4J1I4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,12■□□□□ 0,81
Igkv4-72A0A0B4J1I4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,09■□□□□ 0,81
Igkv4-72A0A0B4J1I4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20,09■□□□□ 0,81
Igkv4-72A0A0B4J1I4 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,05■□□□□ 0,8
Igkv4-72A0A0B4J1I4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,04■□□□□ 0,8
Igkv4-72A0A0B4J1I4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,02■□□□□ 0,8
Igkv4-72A0A0B4J1I4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0,79
Igkv4-72A0A0B4J1I4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Igkv4-72A0A0B4J1I4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19,91■□□□□ 0,78
Igkv4-72A0A0B4J1I4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19,9■□□□□ 0,78
Igkv4-72A0A0B4J1I4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19,88■□□□□ 0,77
Igkv4-72A0A0B4J1I4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19,86■□□□□ 0,77
Igkv4-72A0A0B4J1I4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,82■□□□□ 0,76
Igkv4-72A0A0B4J1I4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,82■□□□□ 0,76
Igkv4-72A0A0B4J1I4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,8■□□□□ 0,76
Igkv4-72A0A0B4J1I4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,79■□□□□ 0,76
Igkv4-72A0A0B4J1I4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Igkv4-72A0A0B4J1I4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Igkv4-72A0A0B4J1I4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Igkv4-72A0A0B4J1I4 Rab21-202ENSMUST00000218831 843 ntBASIC19,7■□□□□ 0,74
Igkv4-72A0A0B4J1I4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19,7■□□□□ 0,74
Igkv4-72A0A0B4J1I4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Igkv4-72A0A0B4J1I4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Igkv4-72A0A0B4J1I4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,65■□□□□ 0,74
Igkv4-72A0A0B4J1I4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,73
Igkv4-72A0A0B4J1I4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19,64■□□□□ 0,73
Igkv4-72A0A0B4J1I4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19,6■□□□□ 0,73
Igkv4-72A0A0B4J1I4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19,6■□□□□ 0,73
Igkv4-72A0A0B4J1I4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Igkv4-72A0A0B4J1I4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19,59■□□□□ 0,73
Retrieved 100 of 76,532 protein–RNA pairs in 7,7 ms