Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Gm25239-201ENSMUST00000174915 86 ntBASIC22.16■■□□□ 1.14
Igkv1-110A0A0B4J1I0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv1-110A0A0B4J1I0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv1-110A0A0B4J1I0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Igkv1-110A0A0B4J1I0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Igkv1-110A0A0B4J1I0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv1-110A0A0B4J1I0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv1-110A0A0B4J1I0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv1-110A0A0B4J1I0 Psd-208ENSMUST00000224556 2034 ntBASIC19.91■□□□□ 0.78
Igkv1-110A0A0B4J1I0 Gm15042-201ENSMUST00000120212 883 ntBASIC19.74■□□□□ 0.75
Igkv1-110A0A0B4J1I0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv1-110A0A0B4J1I0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.31■□□□□ 0.68
Igkv1-110A0A0B4J1I0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv1-110A0A0B4J1I0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv1-110A0A0B4J1I0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Igkv1-110A0A0B4J1I0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.05■□□□□ 0.64
Igkv1-110A0A0B4J1I0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.99■□□□□ 0.63
Igkv1-110A0A0B4J1I0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Igkv1-110A0A0B4J1I0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv1-110A0A0B4J1I0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Igkv1-110A0A0B4J1I0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv1-110A0A0B4J1I0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Igkv1-110A0A0B4J1I0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Igkv1-110A0A0B4J1I0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Gm23366-201ENSMUST00000175022 89 ntBASIC18.59■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv1-110A0A0B4J1I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Igkv1-110A0A0B4J1I0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv1-110A0A0B4J1I0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.51■□□□□ 0.55
Igkv1-110A0A0B4J1I0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-110A0A0B4J1I0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-110A0A0B4J1I0 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.32■□□□□ 0.52
Igkv1-110A0A0B4J1I0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Igkv1-110A0A0B4J1I0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv1-110A0A0B4J1I0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Igkv1-110A0A0B4J1I0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.11■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Igkv1-110A0A0B4J1I0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.06■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv1-110A0A0B4J1I0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Igkv1-110A0A0B4J1I0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.92■□□□□ 0.46
Igkv1-110A0A0B4J1I0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv1-110A0A0B4J1I0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv1-110A0A0B4J1I0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv1-110A0A0B4J1I0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv1-110A0A0B4J1I0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv1-110A0A0B4J1I0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Igkv1-110A0A0B4J1I0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Igkv1-110A0A0B4J1I0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.54■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Igkv1-110A0A0B4J1I0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.49■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Igkv1-110A0A0B4J1I0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-110A0A0B4J1I0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Igkv1-110A0A0B4J1I0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.38■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.38■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.36■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Gm25238-201ENSMUST00000174914 89 ntBASIC17.35■□□□□ 0.37
Igkv1-110A0A0B4J1I0 Gm27325-201ENSMUST00000175467 74 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms