Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Gm25239-201ENSMUST00000174915 86 ntBASIC22,16■■□□□ 1,14
Igkv1-110A0A0B4J1I0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Igkv1-110A0A0B4J1I0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Igkv1-110A0A0B4J1I0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,37■□□□□ 0,85
Igkv1-110A0A0B4J1I0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20,31■□□□□ 0,84
Igkv1-110A0A0B4J1I0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20,24■□□□□ 0,83
Igkv1-110A0A0B4J1I0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,23■□□□□ 0,83
Igkv1-110A0A0B4J1I0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20,12■□□□□ 0,81
Igkv1-110A0A0B4J1I0 Psd-208ENSMUST00000224556 2034 ntBASIC19,91■□□□□ 0,78
Igkv1-110A0A0B4J1I0 Gm15042-201ENSMUST00000120212 883 ntBASIC19,74■□□□□ 0,75
Igkv1-110A0A0B4J1I0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Igkv1-110A0A0B4J1I0 Gm15045-201ENSMUST00000117359 883 ntBASIC19,31■□□□□ 0,68
Igkv1-110A0A0B4J1I0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19,15■□□□□ 0,66
Igkv1-110A0A0B4J1I0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Igkv1-110A0A0B4J1I0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Igkv1-110A0A0B4J1I0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19,05■□□□□ 0,64
Igkv1-110A0A0B4J1I0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19,01■□□□□ 0,63
Igkv1-110A0A0B4J1I0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0,63
Igkv1-110A0A0B4J1I0 Gm24109-201ENSMUST00000175489 103 ntBASIC18,99■□□□□ 0,63
Igkv1-110A0A0B4J1I0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18,95■□□□□ 0,62
Igkv1-110A0A0B4J1I0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18,89■□□□□ 0,61
Igkv1-110A0A0B4J1I0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18,88■□□□□ 0,61
Igkv1-110A0A0B4J1I0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18,82■□□□□ 0,6
Igkv1-110A0A0B4J1I0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv1-110A0A0B4J1I0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18,75■□□□□ 0,59
Igkv1-110A0A0B4J1I0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18,71■□□□□ 0,59
Igkv1-110A0A0B4J1I0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Igkv1-110A0A0B4J1I0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18,67■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18,66■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18,66■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18,65■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18,65■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18,64■□□□□ 0,58
Igkv1-110A0A0B4J1I0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Igkv1-110A0A0B4J1I0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18,6■□□□□ 0,57
Igkv1-110A0A0B4J1I0 Gm23366-201ENSMUST00000175022 89 ntBASIC18,59■□□□□ 0,57
Igkv1-110A0A0B4J1I0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18,59■□□□□ 0,57
Igkv1-110A0A0B4J1I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18,57■□□□□ 0,56
Igkv1-110A0A0B4J1I0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18,54■□□□□ 0,56
Igkv1-110A0A0B4J1I0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18,51■□□□□ 0,55
Igkv1-110A0A0B4J1I0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,45■□□□□ 0,54
Igkv1-110A0A0B4J1I0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18,44■□□□□ 0,54
Igkv1-110A0A0B4J1I0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18,4■□□□□ 0,54
Igkv1-110A0A0B4J1I0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,37■□□□□ 0,53
Igkv1-110A0A0B4J1I0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18,37■□□□□ 0,53
Igkv1-110A0A0B4J1I0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18,36■□□□□ 0,53
Igkv1-110A0A0B4J1I0 Gm42596-201ENSMUST00000196305 1958 ntBASIC18,32■□□□□ 0,52
Igkv1-110A0A0B4J1I0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18,31■□□□□ 0,52
Igkv1-110A0A0B4J1I0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18,25■□□□□ 0,51
Igkv1-110A0A0B4J1I0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18,16■□□□□ 0,5
Igkv1-110A0A0B4J1I0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,14■□□□□ 0,49
Igkv1-110A0A0B4J1I0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18,14■□□□□ 0,49
Igkv1-110A0A0B4J1I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,14■□□□□ 0,49
Igkv1-110A0A0B4J1I0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18,11■□□□□ 0,49
Igkv1-110A0A0B4J1I0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,09■□□□□ 0,49
Igkv1-110A0A0B4J1I0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18,08■□□□□ 0,49
Igkv1-110A0A0B4J1I0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18,07■□□□□ 0,48
Igkv1-110A0A0B4J1I0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18,06■□□□□ 0,48
Igkv1-110A0A0B4J1I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,05■□□□□ 0,48
Igkv1-110A0A0B4J1I0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17,97■□□□□ 0,47
Igkv1-110A0A0B4J1I0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17,93■□□□□ 0,46
Igkv1-110A0A0B4J1I0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17,92■□□□□ 0,46
Igkv1-110A0A0B4J1I0 Gm10524-201ENSMUST00000181931 1893 ntBASIC17,92■□□□□ 0,46
Igkv1-110A0A0B4J1I0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17,88■□□□□ 0,45
Igkv1-110A0A0B4J1I0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17,87■□□□□ 0,45
Igkv1-110A0A0B4J1I0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17,84■□□□□ 0,45
Igkv1-110A0A0B4J1I0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17,83■□□□□ 0,45
Igkv1-110A0A0B4J1I0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17,72■□□□□ 0,43
Igkv1-110A0A0B4J1I0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17,7■□□□□ 0,42
Igkv1-110A0A0B4J1I0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17,69■□□□□ 0,42
Igkv1-110A0A0B4J1I0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Igkv1-110A0A0B4J1I0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17,62■□□□□ 0,41
Igkv1-110A0A0B4J1I0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17,57■□□□□ 0,4
Igkv1-110A0A0B4J1I0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17,57■□□□□ 0,4
Igkv1-110A0A0B4J1I0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17,57■□□□□ 0,4
Igkv1-110A0A0B4J1I0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17,55■□□□□ 0,4
Igkv1-110A0A0B4J1I0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17,54■□□□□ 0,4
Igkv1-110A0A0B4J1I0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17,52■□□□□ 0,4
Igkv1-110A0A0B4J1I0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17,52■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17,52■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17,5■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17,49■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17,48■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17,48■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17,48■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17,46■□□□□ 0,39
Igkv1-110A0A0B4J1I0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17,46■□□□□ 0,39
Igkv1-110A0A0B4J1I0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17,44■□□□□ 0,38
Igkv1-110A0A0B4J1I0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17,43■□□□□ 0,38
Igkv1-110A0A0B4J1I0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17,42■□□□□ 0,38
Igkv1-110A0A0B4J1I0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17,41■□□□□ 0,38
Igkv1-110A0A0B4J1I0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17,4■□□□□ 0,38
Igkv1-110A0A0B4J1I0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17,39■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17,39■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17,39■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17,38■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17,38■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17,36■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Gm25238-201ENSMUST00000174914 89 ntBASIC17,35■□□□□ 0,37
Igkv1-110A0A0B4J1I0 Gm27325-201ENSMUST00000175467 74 ntBASIC17,35■□□□□ 0,37
Retrieved 100 of 76,532 protein–RNA pairs in 19,7 ms