Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Gm25239-201ENSMUST00000174915 86 ntBASIC24,72■■□□□ 1,55
Igkv3-9A0A140T8P4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Igkv3-9A0A140T8P4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Igkv3-9A0A140T8P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22,66■■□□□ 1,22
Igkv3-9A0A140T8P4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22,64■■□□□ 1,21
Igkv3-9A0A140T8P4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Igkv3-9A0A140T8P4 Gm15042-201ENSMUST00000120212 883 ntBASIC22,08■■□□□ 1,13
Igkv3-9A0A140T8P4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Igkv3-9A0A140T8P4 Psd-208ENSMUST00000224556 2034 ntBASIC21,73■■□□□ 1,07
Igkv3-9A0A140T8P4 Gm15045-201ENSMUST00000117359 883 ntBASIC21,58■■□□□ 1,05
Igkv3-9A0A140T8P4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Igkv3-9A0A140T8P4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Igkv3-9A0A140T8P4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Igkv3-9A0A140T8P4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,29■■□□□ 1
Igkv3-9A0A140T8P4 Gm24109-201ENSMUST00000175489 103 ntBASIC21,16■□□□□ 0,98
Igkv3-9A0A140T8P4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,07■□□□□ 0,96
Igkv3-9A0A140T8P4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20,95■□□□□ 0,94
Igkv3-9A0A140T8P4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20,92■□□□□ 0,94
Igkv3-9A0A140T8P4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20,88■□□□□ 0,93
Igkv3-9A0A140T8P4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,84■□□□□ 0,93
Igkv3-9A0A140T8P4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Igkv3-9A0A140T8P4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20,82■□□□□ 0,92
Igkv3-9A0A140T8P4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20,8■□□□□ 0,92
Igkv3-9A0A140T8P4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Igkv3-9A0A140T8P4 Gm23366-201ENSMUST00000175022 89 ntBASIC20,77■□□□□ 0,92
Igkv3-9A0A140T8P4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20,77■□□□□ 0,91
Igkv3-9A0A140T8P4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20,75■□□□□ 0,91
Igkv3-9A0A140T8P4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,72■□□□□ 0,91
Igkv3-9A0A140T8P4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20,69■□□□□ 0,9
Igkv3-9A0A140T8P4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,6■□□□□ 0,89
Igkv3-9A0A140T8P4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,6■□□□□ 0,89
Igkv3-9A0A140T8P4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,59■□□□□ 0,89
Igkv3-9A0A140T8P4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20,55■□□□□ 0,88
Igkv3-9A0A140T8P4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20,54■□□□□ 0,88
Igkv3-9A0A140T8P4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Igkv3-9A0A140T8P4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Igkv3-9A0A140T8P4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,45■□□□□ 0,86
Igkv3-9A0A140T8P4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,43■□□□□ 0,86
Igkv3-9A0A140T8P4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20,27■□□□□ 0,84
Igkv3-9A0A140T8P4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20,27■□□□□ 0,84
Igkv3-9A0A140T8P4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,23■□□□□ 0,83
Igkv3-9A0A140T8P4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,21■□□□□ 0,83
Igkv3-9A0A140T8P4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,2■□□□□ 0,82
Igkv3-9A0A140T8P4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,17■□□□□ 0,82
Igkv3-9A0A140T8P4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,09■□□□□ 0,81
Igkv3-9A0A140T8P4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,07■□□□□ 0,8
Igkv3-9A0A140T8P4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,01■□□□□ 0,79
Igkv3-9A0A140T8P4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Igkv3-9A0A140T8P4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Igkv3-9A0A140T8P4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19,96■□□□□ 0,79
Igkv3-9A0A140T8P4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19,93■□□□□ 0,78
Igkv3-9A0A140T8P4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19,79■□□□□ 0,76
Igkv3-9A0A140T8P4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19,77■□□□□ 0,76
Igkv3-9A0A140T8P4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Igkv3-9A0A140T8P4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19,72■□□□□ 0,75
Igkv3-9A0A140T8P4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19,7■□□□□ 0,74
Igkv3-9A0A140T8P4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Igkv3-9A0A140T8P4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Igkv3-9A0A140T8P4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19,61■□□□□ 0,73
Igkv3-9A0A140T8P4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19,6■□□□□ 0,73
Igkv3-9A0A140T8P4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19,58■□□□□ 0,73
Igkv3-9A0A140T8P4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19,57■□□□□ 0,72
Igkv3-9A0A140T8P4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Igkv3-9A0A140T8P4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Igkv3-9A0A140T8P4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19,52■□□□□ 0,72
Igkv3-9A0A140T8P4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19,51■□□□□ 0,71
Igkv3-9A0A140T8P4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19,47■□□□□ 0,71
Igkv3-9A0A140T8P4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19,46■□□□□ 0,71
Igkv3-9A0A140T8P4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19,43■□□□□ 0,7
Igkv3-9A0A140T8P4 Gm42596-201ENSMUST00000196305 1958 ntBASIC19,43■□□□□ 0,7
Igkv3-9A0A140T8P4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Igkv3-9A0A140T8P4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19,4■□□□□ 0,7
Igkv3-9A0A140T8P4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,39■□□□□ 0,69
Igkv3-9A0A140T8P4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19,38■□□□□ 0,69
Igkv3-9A0A140T8P4 Gm27325-201ENSMUST00000175467 74 ntBASIC19,38■□□□□ 0,69
Igkv3-9A0A140T8P4 Gm25238-201ENSMUST00000174914 89 ntBASIC19,32■□□□□ 0,68
Igkv3-9A0A140T8P4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Igkv3-9A0A140T8P4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Igkv3-9A0A140T8P4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Igkv3-9A0A140T8P4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19,23■□□□□ 0,67
Igkv3-9A0A140T8P4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,21■□□□□ 0,67
Igkv3-9A0A140T8P4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19,2■□□□□ 0,66
Igkv3-9A0A140T8P4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,18■□□□□ 0,66
Igkv3-9A0A140T8P4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv3-9A0A140T8P4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv3-9A0A140T8P4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv3-9A0A140T8P4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv3-9A0A140T8P4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Igkv3-9A0A140T8P4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19,15■□□□□ 0,66
Igkv3-9A0A140T8P4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19,14■□□□□ 0,65
Igkv3-9A0A140T8P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,08■□□□□ 0,64
Igkv3-9A0A140T8P4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19,06■□□□□ 0,64
Igkv3-9A0A140T8P4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,05■□□□□ 0,64
Igkv3-9A0A140T8P4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Igkv3-9A0A140T8P4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,03■□□□□ 0,64
Igkv3-9A0A140T8P4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18,98■□□□□ 0,63
Igkv3-9A0A140T8P4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18,98■□□□□ 0,63
Igkv3-9A0A140T8P4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18,98■□□□□ 0,63
Igkv3-9A0A140T8P4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18,97■□□□□ 0,63
Igkv3-9A0A140T8P4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,95■□□□□ 0,62
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms