Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Gm25239-201ENSMUST00000174915 86 ntBASIC24.72■■□□□ 1.55
Igkv3-9A0A140T8P4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Igkv3-9A0A140T8P4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Igkv3-9A0A140T8P4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv3-9A0A140T8P4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Igkv3-9A0A140T8P4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv3-9A0A140T8P4 Gm15042-201ENSMUST00000120212 883 ntBASIC22.08■■□□□ 1.13
Igkv3-9A0A140T8P4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv3-9A0A140T8P4 Psd-208ENSMUST00000224556 2034 ntBASIC21.73■■□□□ 1.07
Igkv3-9A0A140T8P4 Gm15045-201ENSMUST00000117359 883 ntBASIC21.58■■□□□ 1.05
Igkv3-9A0A140T8P4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv3-9A0A140T8P4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv3-9A0A140T8P4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv3-9A0A140T8P4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.29■■□□□ 1
Igkv3-9A0A140T8P4 Gm24109-201ENSMUST00000175489 103 ntBASIC21.16■□□□□ 0.98
Igkv3-9A0A140T8P4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv3-9A0A140T8P4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv3-9A0A140T8P4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv3-9A0A140T8P4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv3-9A0A140T8P4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv3-9A0A140T8P4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv3-9A0A140T8P4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Igkv3-9A0A140T8P4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv3-9A0A140T8P4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv3-9A0A140T8P4 Gm23366-201ENSMUST00000175022 89 ntBASIC20.77■□□□□ 0.92
Igkv3-9A0A140T8P4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Igkv3-9A0A140T8P4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv3-9A0A140T8P4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Igkv3-9A0A140T8P4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.69■□□□□ 0.9
Igkv3-9A0A140T8P4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv3-9A0A140T8P4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv3-9A0A140T8P4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv3-9A0A140T8P4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv3-9A0A140T8P4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.54■□□□□ 0.88
Igkv3-9A0A140T8P4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Igkv3-9A0A140T8P4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv3-9A0A140T8P4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Igkv3-9A0A140T8P4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Igkv3-9A0A140T8P4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Igkv3-9A0A140T8P4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.27■□□□□ 0.84
Igkv3-9A0A140T8P4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.23■□□□□ 0.83
Igkv3-9A0A140T8P4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv3-9A0A140T8P4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv3-9A0A140T8P4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv3-9A0A140T8P4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv3-9A0A140T8P4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.07■□□□□ 0.8
Igkv3-9A0A140T8P4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.01■□□□□ 0.79
Igkv3-9A0A140T8P4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv3-9A0A140T8P4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igkv3-9A0A140T8P4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Igkv3-9A0A140T8P4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Igkv3-9A0A140T8P4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Igkv3-9A0A140T8P4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Igkv3-9A0A140T8P4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Igkv3-9A0A140T8P4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Igkv3-9A0A140T8P4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Igkv3-9A0A140T8P4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv3-9A0A140T8P4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv3-9A0A140T8P4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.61■□□□□ 0.73
Igkv3-9A0A140T8P4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv3-9A0A140T8P4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Igkv3-9A0A140T8P4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.57■□□□□ 0.72
Igkv3-9A0A140T8P4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv3-9A0A140T8P4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv3-9A0A140T8P4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Igkv3-9A0A140T8P4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv3-9A0A140T8P4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Igkv3-9A0A140T8P4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Igkv3-9A0A140T8P4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.43■□□□□ 0.7
Igkv3-9A0A140T8P4 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.43■□□□□ 0.7
Igkv3-9A0A140T8P4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv3-9A0A140T8P4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Igkv3-9A0A140T8P4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.39■□□□□ 0.69
Igkv3-9A0A140T8P4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.38■□□□□ 0.69
Igkv3-9A0A140T8P4 Gm27325-201ENSMUST00000175467 74 ntBASIC19.38■□□□□ 0.69
Igkv3-9A0A140T8P4 Gm25238-201ENSMUST00000174914 89 ntBASIC19.32■□□□□ 0.68
Igkv3-9A0A140T8P4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv3-9A0A140T8P4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv3-9A0A140T8P4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv3-9A0A140T8P4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.23■□□□□ 0.67
Igkv3-9A0A140T8P4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv3-9A0A140T8P4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Igkv3-9A0A140T8P4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv3-9A0A140T8P4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv3-9A0A140T8P4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv3-9A0A140T8P4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv3-9A0A140T8P4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv3-9A0A140T8P4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv3-9A0A140T8P4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv3-9A0A140T8P4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Igkv3-9A0A140T8P4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Igkv3-9A0A140T8P4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Igkv3-9A0A140T8P4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv3-9A0A140T8P4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Igkv3-9A0A140T8P4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv3-9A0A140T8P4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv3-9A0A140T8P4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Igkv3-9A0A140T8P4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.98■□□□□ 0.63
Igkv3-9A0A140T8P4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.97■□□□□ 0.63
Igkv3-9A0A140T8P4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 408.1 ms