Protein–RNA interactions for Protein: Q8CF36

Fam229b, Protein FAM229B, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam229bQ8CF36 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Fam229bQ8CF36 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam229bQ8CF36 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Fam229bQ8CF36 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Fam229bQ8CF36 Psd-208ENSMUST00000224556 2034 ntBASIC19.78■□□□□ 0.76
Fam229bQ8CF36 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fam229bQ8CF36 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Fam229bQ8CF36 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam229bQ8CF36 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Fam229bQ8CF36 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam229bQ8CF36 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam229bQ8CF36 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Fam229bQ8CF36 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Fam229bQ8CF36 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Fam229bQ8CF36 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam229bQ8CF36 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam229bQ8CF36 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam229bQ8CF36 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam229bQ8CF36 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam229bQ8CF36 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam229bQ8CF36 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam229bQ8CF36 Gm42596-201ENSMUST00000196305 1958 ntBASIC18.26■□□□□ 0.51
Fam229bQ8CF36 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam229bQ8CF36 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam229bQ8CF36 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.14■□□□□ 0.49
Fam229bQ8CF36 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Fam229bQ8CF36 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fam229bQ8CF36 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fam229bQ8CF36 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Fam229bQ8CF36 Gm25239-201ENSMUST00000174915 86 ntBASIC17.77■□□□□ 0.44
Fam229bQ8CF36 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam229bQ8CF36 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam229bQ8CF36 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.68■□□□□ 0.42
Fam229bQ8CF36 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam229bQ8CF36 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam229bQ8CF36 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam229bQ8CF36 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Fam229bQ8CF36 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam229bQ8CF36 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam229bQ8CF36 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.53■□□□□ 0.4
Fam229bQ8CF36 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.5■□□□□ 0.39
Fam229bQ8CF36 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fam229bQ8CF36 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fam229bQ8CF36 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Fam229bQ8CF36 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fam229bQ8CF36 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fam229bQ8CF36 Zxda-201ENSMUST00000117281 2621 ntBASIC17.31■□□□□ 0.36
Fam229bQ8CF36 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fam229bQ8CF36 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC17.3■□□□□ 0.36
Fam229bQ8CF36 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fam229bQ8CF36 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam229bQ8CF36 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam229bQ8CF36 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam229bQ8CF36 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fam229bQ8CF36 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam229bQ8CF36 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fam229bQ8CF36 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.15■□□□□ 0.34
Fam229bQ8CF36 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.14■□□□□ 0.33
Fam229bQ8CF36 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Fam229bQ8CF36 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam229bQ8CF36 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam229bQ8CF36 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Fam229bQ8CF36 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fam229bQ8CF36 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fam229bQ8CF36 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Fam229bQ8CF36 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Fam229bQ8CF36 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Fam229bQ8CF36 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Fam229bQ8CF36 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Fam229bQ8CF36 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Fam229bQ8CF36 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Fam229bQ8CF36 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Fam229bQ8CF36 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Fam229bQ8CF36 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Fam229bQ8CF36 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Fam229bQ8CF36 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Fam229bQ8CF36 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Fam229bQ8CF36 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fam229bQ8CF36 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fam229bQ8CF36 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fam229bQ8CF36 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam229bQ8CF36 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Fam229bQ8CF36 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.76■□□□□ 0.27
Fam229bQ8CF36 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Fam229bQ8CF36 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam229bQ8CF36 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC16.71■□□□□ 0.27
Fam229bQ8CF36 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
Fam229bQ8CF36 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Fam229bQ8CF36 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Fam229bQ8CF36 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fam229bQ8CF36 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Fam229bQ8CF36 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Fam229bQ8CF36 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Fam229bQ8CF36 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Fam229bQ8CF36 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fam229bQ8CF36 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fam229bQ8CF36 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam229bQ8CF36 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fam229bQ8CF36 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fam229bQ8CF36 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms