Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Gm25239-201ENSMUST00000174915 86 ntBASIC26,15■■□□□ 1,78
Ighv1-59A0A0A6YXE0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,02■■□□□ 1,44
Ighv1-59A0A0A6YXE0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Ighv1-59A0A0A6YXE0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Ighv1-59A0A0A6YXE0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ighv1-59A0A0A6YXE0 Gm15042-201ENSMUST00000120212 883 ntBASIC23,17■■□□□ 1,3
Ighv1-59A0A0A6YXE0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,13■■□□□ 1,29
Ighv1-59A0A0A6YXE0 Gm15045-201ENSMUST00000117359 883 ntBASIC22,66■■□□□ 1,22
Ighv1-59A0A0A6YXE0 Gm24109-201ENSMUST00000175489 103 ntBASIC22,49■■□□□ 1,19
Ighv1-59A0A0A6YXE0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Ighv1-59A0A0A6YXE0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Ighv1-59A0A0A6YXE0 Psd-208ENSMUST00000224556 2034 ntBASIC22,12■■□□□ 1,13
Ighv1-59A0A0A6YXE0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,04■■□□□ 1,12
Ighv1-59A0A0A6YXE0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,02■■□□□ 1,12
Ighv1-59A0A0A6YXE0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,93■■□□□ 1,1
Ighv1-59A0A0A6YXE0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,93■■□□□ 1,1
Ighv1-59A0A0A6YXE0 Gm23366-201ENSMUST00000175022 89 ntBASIC21,92■■□□□ 1,1
Ighv1-59A0A0A6YXE0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,9■■□□□ 1,1
Ighv1-59A0A0A6YXE0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Ighv1-59A0A0A6YXE0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21,72■■□□□ 1,07
Ighv1-59A0A0A6YXE0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Ighv1-59A0A0A6YXE0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Ighv1-59A0A0A6YXE0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,55■■□□□ 1,04
Ighv1-59A0A0A6YXE0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,55■■□□□ 1,04
Ighv1-59A0A0A6YXE0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,55■■□□□ 1,04
Ighv1-59A0A0A6YXE0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Ighv1-59A0A0A6YXE0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,47■■□□□ 1,03
Ighv1-59A0A0A6YXE0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Ighv1-59A0A0A6YXE0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Ighv1-59A0A0A6YXE0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,32■■□□□ 1
Ighv1-59A0A0A6YXE0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,26■□□□□ 0,99
Ighv1-59A0A0A6YXE0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,22■□□□□ 0,99
Ighv1-59A0A0A6YXE0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Ighv1-59A0A0A6YXE0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,08■□□□□ 0,97
Ighv1-59A0A0A6YXE0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Ighv1-59A0A0A6YXE0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,9■□□□□ 0,94
Ighv1-59A0A0A6YXE0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,88■□□□□ 0,93
Ighv1-59A0A0A6YXE0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,87■□□□□ 0,93
Ighv1-59A0A0A6YXE0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,8■□□□□ 0,92
Ighv1-59A0A0A6YXE0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20,79■□□□□ 0,92
Ighv1-59A0A0A6YXE0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,69■□□□□ 0,9
Ighv1-59A0A0A6YXE0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,68■□□□□ 0,9
Ighv1-59A0A0A6YXE0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,67■□□□□ 0,9
Ighv1-59A0A0A6YXE0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20,63■□□□□ 0,89
Ighv1-59A0A0A6YXE0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20,6■□□□□ 0,89
Ighv1-59A0A0A6YXE0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,58■□□□□ 0,89
Ighv1-59A0A0A6YXE0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,55■□□□□ 0,88
Ighv1-59A0A0A6YXE0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20,55■□□□□ 0,88
Ighv1-59A0A0A6YXE0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,54■□□□□ 0,88
Ighv1-59A0A0A6YXE0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,52■□□□□ 0,88
Ighv1-59A0A0A6YXE0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Ighv1-59A0A0A6YXE0 Gm25238-201ENSMUST00000174914 89 ntBASIC20,51■□□□□ 0,87
Ighv1-59A0A0A6YXE0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Ighv1-59A0A0A6YXE0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Ighv1-59A0A0A6YXE0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20,46■□□□□ 0,87
Ighv1-59A0A0A6YXE0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,43■□□□□ 0,86
Ighv1-59A0A0A6YXE0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,35■□□□□ 0,85
Ighv1-59A0A0A6YXE0 Gm27325-201ENSMUST00000175467 74 ntBASIC20,34■□□□□ 0,85
Ighv1-59A0A0A6YXE0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,34■□□□□ 0,85
Ighv1-59A0A0A6YXE0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,29■□□□□ 0,84
Ighv1-59A0A0A6YXE0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,27■□□□□ 0,84
Ighv1-59A0A0A6YXE0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,27■□□□□ 0,83
Ighv1-59A0A0A6YXE0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,25■□□□□ 0,83
Ighv1-59A0A0A6YXE0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,23■□□□□ 0,83
Ighv1-59A0A0A6YXE0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,2■□□□□ 0,82
Ighv1-59A0A0A6YXE0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20,19■□□□□ 0,82
Ighv1-59A0A0A6YXE0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,17■□□□□ 0,82
Ighv1-59A0A0A6YXE0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,15■□□□□ 0,82
Ighv1-59A0A0A6YXE0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Ighv1-59A0A0A6YXE0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20,12■□□□□ 0,81
Ighv1-59A0A0A6YXE0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,12■□□□□ 0,81
Ighv1-59A0A0A6YXE0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,1■□□□□ 0,81
Ighv1-59A0A0A6YXE0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20,08■□□□□ 0,8
Ighv1-59A0A0A6YXE0 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,05■□□□□ 0,8
Ighv1-59A0A0A6YXE0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,02■□□□□ 0,8
Ighv1-59A0A0A6YXE0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20■□□□□ 0,79
Ighv1-59A0A0A6YXE0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20■□□□□ 0,79
Ighv1-59A0A0A6YXE0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19,99■□□□□ 0,79
Ighv1-59A0A0A6YXE0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19,96■□□□□ 0,79
Ighv1-59A0A0A6YXE0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19,86■□□□□ 0,77
Ighv1-59A0A0A6YXE0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19,85■□□□□ 0,77
Ighv1-59A0A0A6YXE0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Ighv1-59A0A0A6YXE0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19,8■□□□□ 0,76
Ighv1-59A0A0A6YXE0 Rab21-202ENSMUST00000218831 843 ntBASIC19,8■□□□□ 0,76
Ighv1-59A0A0A6YXE0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,8■□□□□ 0,76
Ighv1-59A0A0A6YXE0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,78■□□□□ 0,76
Ighv1-59A0A0A6YXE0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Ighv1-59A0A0A6YXE0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19,72■□□□□ 0,75
Ighv1-59A0A0A6YXE0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19,7■□□□□ 0,74
Ighv1-59A0A0A6YXE0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Ighv1-59A0A0A6YXE0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19,67■□□□□ 0,74
Ighv1-59A0A0A6YXE0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,64■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19,62■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19,59■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19,59■□□□□ 0,73
Ighv1-59A0A0A6YXE0 Gm25262-201ENSMUST00000174934 133 ntBASIC19,56■□□□□ 0,72
Ighv1-59A0A0A6YXE0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19,55■□□□□ 0,72
Ighv1-59A0A0A6YXE0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19,54■□□□□ 0,72
Retrieved 100 of 76,532 protein–RNA pairs in 26,7 ms