Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Gm25239-201ENSMUST00000174915 86 ntBASIC26.15■■□□□ 1.78
Ighv1-59A0A0A6YXE0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ighv1-59A0A0A6YXE0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ighv1-59A0A0A6YXE0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ighv1-59A0A0A6YXE0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv1-59A0A0A6YXE0 Gm15042-201ENSMUST00000120212 883 ntBASIC23.17■■□□□ 1.3
Ighv1-59A0A0A6YXE0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ighv1-59A0A0A6YXE0 Gm15045-201ENSMUST00000117359 883 ntBASIC22.66■■□□□ 1.22
Ighv1-59A0A0A6YXE0 Gm24109-201ENSMUST00000175489 103 ntBASIC22.49■■□□□ 1.19
Ighv1-59A0A0A6YXE0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ighv1-59A0A0A6YXE0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-59A0A0A6YXE0 Psd-208ENSMUST00000224556 2034 ntBASIC22.12■■□□□ 1.13
Ighv1-59A0A0A6YXE0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-59A0A0A6YXE0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.02■■□□□ 1.12
Ighv1-59A0A0A6YXE0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv1-59A0A0A6YXE0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv1-59A0A0A6YXE0 Gm23366-201ENSMUST00000175022 89 ntBASIC21.92■■□□□ 1.1
Ighv1-59A0A0A6YXE0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-59A0A0A6YXE0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-59A0A0A6YXE0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ighv1-59A0A0A6YXE0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-59A0A0A6YXE0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ighv1-59A0A0A6YXE0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-59A0A0A6YXE0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-59A0A0A6YXE0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-59A0A0A6YXE0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-59A0A0A6YXE0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.47■■□□□ 1.03
Ighv1-59A0A0A6YXE0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv1-59A0A0A6YXE0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-59A0A0A6YXE0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ighv1-59A0A0A6YXE0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.26■□□□□ 0.99
Ighv1-59A0A0A6YXE0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.22■□□□□ 0.99
Ighv1-59A0A0A6YXE0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-59A0A0A6YXE0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-59A0A0A6YXE0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-59A0A0A6YXE0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-59A0A0A6YXE0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-59A0A0A6YXE0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.87■□□□□ 0.93
Ighv1-59A0A0A6YXE0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-59A0A0A6YXE0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.79■□□□□ 0.92
Ighv1-59A0A0A6YXE0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv1-59A0A0A6YXE0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv1-59A0A0A6YXE0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv1-59A0A0A6YXE0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Ighv1-59A0A0A6YXE0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv1-59A0A0A6YXE0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.58■□□□□ 0.89
Ighv1-59A0A0A6YXE0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-59A0A0A6YXE0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.55■□□□□ 0.88
Ighv1-59A0A0A6YXE0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.54■□□□□ 0.88
Ighv1-59A0A0A6YXE0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-59A0A0A6YXE0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-59A0A0A6YXE0 Gm25238-201ENSMUST00000174914 89 ntBASIC20.51■□□□□ 0.87
Ighv1-59A0A0A6YXE0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-59A0A0A6YXE0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-59A0A0A6YXE0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-59A0A0A6YXE0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-59A0A0A6YXE0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-59A0A0A6YXE0 Gm27325-201ENSMUST00000175467 74 ntBASIC20.34■□□□□ 0.85
Ighv1-59A0A0A6YXE0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ighv1-59A0A0A6YXE0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ighv1-59A0A0A6YXE0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.27■□□□□ 0.84
Ighv1-59A0A0A6YXE0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ighv1-59A0A0A6YXE0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.25■□□□□ 0.83
Ighv1-59A0A0A6YXE0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ighv1-59A0A0A6YXE0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ighv1-59A0A0A6YXE0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Ighv1-59A0A0A6YXE0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.17■□□□□ 0.82
Ighv1-59A0A0A6YXE0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-59A0A0A6YXE0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ighv1-59A0A0A6YXE0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-59A0A0A6YXE0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ighv1-59A0A0A6YXE0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-59A0A0A6YXE0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv1-59A0A0A6YXE0 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.05■□□□□ 0.8
Ighv1-59A0A0A6YXE0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv1-59A0A0A6YXE0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20■□□□□ 0.79
Ighv1-59A0A0A6YXE0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20■□□□□ 0.79
Ighv1-59A0A0A6YXE0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ighv1-59A0A0A6YXE0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-59A0A0A6YXE0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-59A0A0A6YXE0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.85■□□□□ 0.77
Ighv1-59A0A0A6YXE0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-59A0A0A6YXE0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ighv1-59A0A0A6YXE0 Rab21-202ENSMUST00000218831 843 ntBASIC19.8■□□□□ 0.76
Ighv1-59A0A0A6YXE0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-59A0A0A6YXE0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-59A0A0A6YXE0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-59A0A0A6YXE0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-59A0A0A6YXE0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-59A0A0A6YXE0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-59A0A0A6YXE0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-59A0A0A6YXE0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.64■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.62■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-59A0A0A6YXE0 Gm25262-201ENSMUST00000174934 133 ntBASIC19.56■□□□□ 0.72
Ighv1-59A0A0A6YXE0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ighv1-59A0A0A6YXE0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms