Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Gm25239-201ENSMUST00000174915 86 ntBASIC27,25■■□□□ 1,95
Cmc4Q61908 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,05■■□□□ 1,6
Cmc4Q61908 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Cmc4Q61908 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Cmc4Q61908 Gm15042-201ENSMUST00000120212 883 ntBASIC24,09■■□□□ 1,45
Cmc4Q61908 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,78■■□□□ 1,4
Cmc4Q61908 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,51■■□□□ 1,35
Cmc4Q61908 Gm15045-201ENSMUST00000117359 883 ntBASIC23,46■■□□□ 1,35
Cmc4Q61908 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,42■■□□□ 1,34
Cmc4Q61908 Gm24109-201ENSMUST00000175489 103 ntBASIC23,42■■□□□ 1,34
Cmc4Q61908 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,14■■□□□ 1,29
Cmc4Q61908 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,03■■□□□ 1,28
Cmc4Q61908 Gm23366-201ENSMUST00000175022 89 ntBASIC22,93■■□□□ 1,26
Cmc4Q61908 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,84■■□□□ 1,25
Cmc4Q61908 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Cmc4Q61908 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,6■■□□□ 1,21
Cmc4Q61908 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Cmc4Q61908 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Cmc4Q61908 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,41■■□□□ 1,18
Cmc4Q61908 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Cmc4Q61908 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,3■■□□□ 1,16
Cmc4Q61908 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,28■■□□□ 1,16
Cmc4Q61908 Psd-208ENSMUST00000224556 2034 ntBASIC22,25■■□□□ 1,15
Cmc4Q61908 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Cmc4Q61908 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,12■■□□□ 1,13
Cmc4Q61908 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,11■■□□□ 1,13
Cmc4Q61908 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,11■■□□□ 1,13
Cmc4Q61908 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,05■■□□□ 1,12
Cmc4Q61908 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,04■■□□□ 1,12
Cmc4Q61908 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Cmc4Q61908 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,85■■□□□ 1,09
Cmc4Q61908 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Cmc4Q61908 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Cmc4Q61908 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,63■■□□□ 1,05
Cmc4Q61908 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,61■■□□□ 1,05
Cmc4Q61908 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,6■■□□□ 1,05
Cmc4Q61908 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,58■■□□□ 1,04
Cmc4Q61908 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,56■■□□□ 1,04
Cmc4Q61908 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,53■■□□□ 1,04
Cmc4Q61908 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Cmc4Q61908 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,43■■□□□ 1,02
Cmc4Q61908 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Cmc4Q61908 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Cmc4Q61908 Gm25238-201ENSMUST00000174914 89 ntBASIC21,38■■□□□ 1,01
Cmc4Q61908 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Cmc4Q61908 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Cmc4Q61908 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,19■□□□□ 0,98
Cmc4Q61908 Gm27325-201ENSMUST00000175467 74 ntBASIC21,15■□□□□ 0,98
Cmc4Q61908 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Cmc4Q61908 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,15■□□□□ 0,98
Cmc4Q61908 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Cmc4Q61908 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,09■□□□□ 0,97
Cmc4Q61908 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Cmc4Q61908 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,03■□□□□ 0,96
Cmc4Q61908 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,03■□□□□ 0,96
Cmc4Q61908 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Cmc4Q61908 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,02■□□□□ 0,96
Cmc4Q61908 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21■□□□□ 0,95
Cmc4Q61908 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,98■□□□□ 0,95
Cmc4Q61908 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Cmc4Q61908 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20,96■□□□□ 0,95
Cmc4Q61908 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Cmc4Q61908 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,91■□□□□ 0,94
Cmc4Q61908 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,89■□□□□ 0,93
Cmc4Q61908 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,87■□□□□ 0,93
Cmc4Q61908 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,87■□□□□ 0,93
Cmc4Q61908 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,86■□□□□ 0,93
Cmc4Q61908 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,86■□□□□ 0,93
Cmc4Q61908 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,85■□□□□ 0,93
Cmc4Q61908 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Cmc4Q61908 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Cmc4Q61908 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,74■□□□□ 0,91
Cmc4Q61908 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,73■□□□□ 0,91
Cmc4Q61908 Rab21-202ENSMUST00000218831 843 ntBASIC20,68■□□□□ 0,9
Cmc4Q61908 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,67■□□□□ 0,9
Cmc4Q61908 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20,61■□□□□ 0,89
Cmc4Q61908 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20,6■□□□□ 0,89
Cmc4Q61908 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20,58■□□□□ 0,89
Cmc4Q61908 Gm25262-201ENSMUST00000174934 133 ntBASIC20,58■□□□□ 0,89
Cmc4Q61908 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,54■□□□□ 0,88
Cmc4Q61908 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20,54■□□□□ 0,88
Cmc4Q61908 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Cmc4Q61908 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20,48■□□□□ 0,87
Cmc4Q61908 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,47■□□□□ 0,87
Cmc4Q61908 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20,45■□□□□ 0,86
Cmc4Q61908 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,44■□□□□ 0,86
Cmc4Q61908 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,42■□□□□ 0,86
Cmc4Q61908 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,4■□□□□ 0,86
Cmc4Q61908 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20,38■□□□□ 0,85
Cmc4Q61908 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,34■□□□□ 0,85
Cmc4Q61908 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20,34■□□□□ 0,85
Cmc4Q61908 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,84
Cmc4Q61908 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Cmc4Q61908 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20,29■□□□□ 0,84
Cmc4Q61908 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20,28■□□□□ 0,84
Cmc4Q61908 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20,27■□□□□ 0,84
Cmc4Q61908 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20,24■□□□□ 0,83
Cmc4Q61908 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,24■□□□□ 0,83
Cmc4Q61908 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20,21■□□□□ 0,83
Cmc4Q61908 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20,2■□□□□ 0,82
Retrieved 100 of 76,532 protein–RNA pairs in 28,2 ms