RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Q9D727 114 aa12.91□□□□□ -0.34
Pcf11-204ENSMUST00000208058 LeprotO89013 131 aa12.9□□□□□ -0.34
Pcf11-204ENSMUST00000208058 Ifi27l2bQ8VC49 283 aa12.9□□□□□ -0.34
Pcf11-204ENSMUST00000208058 HrnrQ8VHD8 2496 aa12.89□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Tcl1b5P56845 121 aa12.89□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Gm45717A0A1B0GT68 152 aa12.88□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Pttg1Q9CQJ7 199 aa12.88□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Erg28Q9ERY9 140 aa12.88□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Trav13-2A0A075B649 110 aa12.87□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Mzt1Q8BUR9 78 aa12.87□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Tcrg-V4A0A0B4J1J8 138 aa12.86□□□□□ -0.35
Pcf11-204ENSMUST00000208058 9130204L05RikG3UWB8 92 aa12.86□□□□□ -0.35
Pcf11-204ENSMUST00000208058 P84750 121 aa12.85□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Gm10842Q3U587 122 aa12.85□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Josd1Q9DBJ6 202 aa12.85□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Gm42420A0A0J9YUQ2 99 aa12.84□□□□□ -0.35
Pcf11-204ENSMUST00000208058 AponG3X9D6 251 aa12.84□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Wfdc10Q3V2J9 124 aa12.84□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Phpt1Q9DAK9 124 aa12.84□□□□□ -0.35
Pcf11-204ENSMUST00000208058 Defa4P28311 92 aa12.83□□□□□ -0.36
Pcf11-204ENSMUST00000208058 NpyP57774 97 aa12.83□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Gm20730A0A075B5J6 119 aa12.82□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Defa20Q45VN2 95 aa12.81□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Gm28269A0A087WSG3 125 aa12.8□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Gatd1Q8BFQ8 220 aa12.8□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Chchd1Q9CQA6 118 aa12.8□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Gm20726G3UX18 150 aa12.79□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Esp34G3UXG0 151 aa12.79□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Defb39Q70KL3 74 aa12.79□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Reg3dQ9QUS9 175 aa12.79□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Ube2d4D3YUH6 135 aa12.78□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Chac1Q8R3J5 223 aa12.78□□□□□ -0.36
Pcf11-204ENSMUST00000208058 Ccdc179J3QM76 67 aa12.77□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Igkv1-88A0A140T8N1 120 aa12.76□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Smim29Q8R043 75 aa12.76□□□□□ -0.37
Pcf11-204ENSMUST00000208058 1500009C09RikD3YYW9 81 aa12.75□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Rpl24Q8BP67 157 aaKnown RBP12.75□□□□□ -0.37
Pcf11-204ENSMUST00000208058 4930544G11RikQ9CR99 193 aa12.75□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Igkv3-7A0A0G2JE31 119 aa12.74□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Isg15Q64339 161 aaKnown RBP12.74□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Defb12Q8K4N3 78 aa12.74□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Gm28230A0A0A0MQ91 144 aa12.73□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Gm6812B1AXU1 112 aa12.72□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Bean1Q9EQG5 255 aa12.72□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Timm10bQ9WV96 100 aa12.72□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Gm27235Q3UW50 83 aa12.71□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Try10Q792Z1 246 aaKnown RBP12.71□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Q8K1L6 76 aa12.71□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Rgs21V9GXQ3 152 aa12.71□□□□□ -0.37
Pcf11-204ENSMUST00000208058 Scgb1b15A0A087WP50 93 aa12.7□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Brd3osA0A1B0GRB6 84 aa12.7□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Gm17521F6QAC8 156 aa12.7□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Dmac1Q9CQ00 111 aa12.7□□□□□ -0.38
Pcf11-204ENSMUST00000208058 4930432M17RikQ3V0W9 174 aa12.69□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Tomm6Q9CQN3 74 aa12.69□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Ube2aQ9Z255 152 aa12.69□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Scgb1b3J3QJY4 93 aa12.68□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Foxi2Q3I5G5 311 aa12.68□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Fam213bQ9DB60 201 aa12.68□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Prelid3aQ8VE85 172 aa12.67□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Cdk2ap2Q9CPY4 127 aa12.67□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Morn5Q9DAI9 170 aa12.67□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Iglc1A0A0G2JE99 106 aa12.66□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Lgals4Q8K419 326 aa12.66□□□□□ -0.38
Pcf11-204ENSMUST00000208058 A930004D18RikQ8C8W7 157 aa12.65□□□□□ -0.38
Pcf11-204ENSMUST00000208058 SmagpQ99KC7 97 aa12.65□□□□□ -0.38
Pcf11-204ENSMUST00000208058 Pfn2Q9JJV2 140 aa12.64□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Igkv1-110A0A0B4J1I0 119 aa12.63□□□□□ -0.39
Pcf11-204ENSMUST00000208058 GhrhP16043 103 aa12.63□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Gm11011D3Z3L9 86 aa12.62□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Tex54G3UW99 86 aa12.62□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Hist1h2bmP10854 126 aa12.61□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Rmi2Q3UPE3 149 aa12.61□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Hist1h2bhQ64478 126 aa12.61□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Hist2h2bbQ64525 126 aa12.61□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.61□□□□□ -0.39
Pcf11-204ENSMUST00000208058 Lect2O88803 151 aa12.6□□□□□ -0.39
Pcf11-204ENSMUST00000208058 5730596B20RikQ8BQ08 205 aa12.6□□□□□ -0.39
Pcf11-204ENSMUST00000208058 P01837 106 aa12.59□□□□□ -0.39
Pcf11-204ENSMUST00000208058 SrarpQ3ULG3 163 aa12.58□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Anapc11Q9CPX9 84 aa12.58□□□□□ -0.4
Pcf11-204ENSMUST00000208058 1700011M02RikB1AX35 88 aa12.57□□□□□ -0.4
Pcf11-204ENSMUST00000208058 C920008G01RikA0A0B4J1N1 112 aa12.56□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Hsbp1l1B2RXB2 72 aa12.56□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Gm10845Q3UNY9 185 aa12.55□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Mustn1Q99JI1 82 aa12.55□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Psmb2Q9R1P3 201 aa12.55□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Fam240aJ3QNP9 97 aa12.54□□□□□ -0.4
Pcf11-204ENSMUST00000208058 AI606181Q8C7B9 129 aa12.54□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Gm26727M0QWT1 121 aa12.53□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Msrb1Q9JLC3 116 aa12.53□□□□□ -0.4
Pcf11-204ENSMUST00000208058 Mrps10Q80ZK0 160 aaKnown RBP12.52□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Ssbp1Q9CYR0 152 aaKnown RBP12.52□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Cox7bP56393 80 aa12.51□□□□□ -0.41
Pcf11-204ENSMUST00000208058 PpdpfQ9CR37 115 aa12.51□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Gm42674D3YUT9 64 aa12.5□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Gpx1P11352 201 aa12.49□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Trav12-3A0A075B648 115 aa12.47□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Gm9047B9EJX3 177 aa12.47□□□□□ -0.41
Pcf11-204ENSMUST00000208058 Scgb1b19F6WYW0 93 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms