Protein–RNA interactions for Protein: Q3UW50

Gm27235, Predicted gene 27235, mousemouse

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm27235Q3UW50 Gm25239-201ENSMUST00000174915 86 ntBASIC22.22■■□□□ 1.15
Gm27235Q3UW50 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm27235Q3UW50 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm27235Q3UW50 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm27235Q3UW50 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm27235Q3UW50 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm27235Q3UW50 Gm15042-201ENSMUST00000120212 883 ntBASIC19.86■□□□□ 0.77
Gm27235Q3UW50 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm27235Q3UW50 Psd-208ENSMUST00000224556 2034 ntBASIC19.56■□□□□ 0.72
Gm27235Q3UW50 Gm15045-201ENSMUST00000117359 883 ntBASIC19.43■□□□□ 0.7
Gm27235Q3UW50 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm27235Q3UW50 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm27235Q3UW50 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.16■□□□□ 0.66
Gm27235Q3UW50 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm27235Q3UW50 Gm24109-201ENSMUST00000175489 103 ntBASIC19.05■□□□□ 0.64
Gm27235Q3UW50 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm27235Q3UW50 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm27235Q3UW50 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm27235Q3UW50 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm27235Q3UW50 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm27235Q3UW50 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm27235Q3UW50 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm27235Q3UW50 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm27235Q3UW50 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm27235Q3UW50 Gm23366-201ENSMUST00000175022 89 ntBASIC18.68■□□□□ 0.58
Gm27235Q3UW50 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm27235Q3UW50 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.65■□□□□ 0.58
Gm27235Q3UW50 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm27235Q3UW50 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm27235Q3UW50 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm27235Q3UW50 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm27235Q3UW50 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm27235Q3UW50 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm27235Q3UW50 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm27235Q3UW50 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm27235Q3UW50 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm27235Q3UW50 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm27235Q3UW50 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm27235Q3UW50 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.19■□□□□ 0.5
Gm27235Q3UW50 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27235Q3UW50 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm27235Q3UW50 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm27235Q3UW50 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm27235Q3UW50 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.04■□□□□ 0.48
Gm27235Q3UW50 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.01■□□□□ 0.47
Gm27235Q3UW50 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm27235Q3UW50 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm27235Q3UW50 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm27235Q3UW50 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm27235Q3UW50 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm27235Q3UW50 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm27235Q3UW50 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm27235Q3UW50 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm27235Q3UW50 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm27235Q3UW50 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm27235Q3UW50 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.62■□□□□ 0.41
Gm27235Q3UW50 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.58■□□□□ 0.4
Gm27235Q3UW50 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm27235Q3UW50 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm27235Q3UW50 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm27235Q3UW50 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm27235Q3UW50 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm27235Q3UW50 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Gm27235Q3UW50 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.48■□□□□ 0.39
Gm27235Q3UW50 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm27235Q3UW50 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Gm27235Q3UW50 Gm27325-201ENSMUST00000175467 74 ntBASIC17.44■□□□□ 0.38
Gm27235Q3UW50 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm27235Q3UW50 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Gm27235Q3UW50 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.41■□□□□ 0.38
Gm27235Q3UW50 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm27235Q3UW50 Gm25238-201ENSMUST00000174914 89 ntBASIC17.36■□□□□ 0.37
Gm27235Q3UW50 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm27235Q3UW50 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm27235Q3UW50 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm27235Q3UW50 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm27235Q3UW50 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm27235Q3UW50 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm27235Q3UW50 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm27235Q3UW50 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm27235Q3UW50 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm27235Q3UW50 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm27235Q3UW50 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm27235Q3UW50 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm27235Q3UW50 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm27235Q3UW50 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm27235Q3UW50 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm27235Q3UW50 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm27235Q3UW50 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Gm27235Q3UW50 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm27235Q3UW50 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm27235Q3UW50 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm27235Q3UW50 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm27235Q3UW50 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm27235Q3UW50 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm27235Q3UW50 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm27235Q3UW50 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm27235Q3UW50 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm27235Q3UW50 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17■□□□□ 0.31
Gm27235Q3UW50 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms