Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ssbp1Q9CYR0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ssbp1Q9CYR0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ssbp1Q9CYR0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Ssbp1Q9CYR0 Psd-208ENSMUST00000224556 2034 ntBASIC23.76■■□□□ 1.39
Ssbp1Q9CYR0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ssbp1Q9CYR0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ssbp1Q9CYR0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Ssbp1Q9CYR0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ssbp1Q9CYR0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ssbp1Q9CYR0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssbp1Q9CYR0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ssbp1Q9CYR0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ssbp1Q9CYR0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ssbp1Q9CYR0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ssbp1Q9CYR0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ssbp1Q9CYR0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ssbp1Q9CYR0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ssbp1Q9CYR0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ssbp1Q9CYR0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ssbp1Q9CYR0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ssbp1Q9CYR0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22■■□□□ 1.11
Ssbp1Q9CYR0 Gm25239-201ENSMUST00000174915 86 ntBASIC21.94■■□□□ 1.1
Ssbp1Q9CYR0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssbp1Q9CYR0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ssbp1Q9CYR0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.67■■□□□ 1.06
Ssbp1Q9CYR0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Ssbp1Q9CYR0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssbp1Q9CYR0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ssbp1Q9CYR0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ssbp1Q9CYR0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ssbp1Q9CYR0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ssbp1Q9CYR0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.27■■□□□ 1
Ssbp1Q9CYR0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ssbp1Q9CYR0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ssbp1Q9CYR0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ssbp1Q9CYR0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssbp1Q9CYR0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ssbp1Q9CYR0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ssbp1Q9CYR0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ssbp1Q9CYR0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ssbp1Q9CYR0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ssbp1Q9CYR0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssbp1Q9CYR0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp1Q9CYR0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssbp1Q9CYR0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.93■□□□□ 0.94
Ssbp1Q9CYR0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssbp1Q9CYR0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.92■□□□□ 0.94
Ssbp1Q9CYR0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssbp1Q9CYR0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssbp1Q9CYR0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.75■□□□□ 0.91
Ssbp1Q9CYR0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssbp1Q9CYR0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.71■□□□□ 0.91
Ssbp1Q9CYR0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssbp1Q9CYR0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssbp1Q9CYR0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.69■□□□□ 0.9
Ssbp1Q9CYR0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssbp1Q9CYR0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.64■□□□□ 0.89
Ssbp1Q9CYR0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ssbp1Q9CYR0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ssbp1Q9CYR0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssbp1Q9CYR0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssbp1Q9CYR0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssbp1Q9CYR0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssbp1Q9CYR0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssbp1Q9CYR0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ssbp1Q9CYR0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ssbp1Q9CYR0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp1Q9CYR0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssbp1Q9CYR0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssbp1Q9CYR0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ssbp1Q9CYR0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ssbp1Q9CYR0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssbp1Q9CYR0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssbp1Q9CYR0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ssbp1Q9CYR0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp1Q9CYR0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp1Q9CYR0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp1Q9CYR0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ssbp1Q9CYR0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssbp1Q9CYR0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssbp1Q9CYR0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssbp1Q9CYR0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.13■□□□□ 0.81
Ssbp1Q9CYR0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssbp1Q9CYR0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.11■□□□□ 0.81
Ssbp1Q9CYR0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssbp1Q9CYR0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ssbp1Q9CYR0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ssbp1Q9CYR0 Gm15042-201ENSMUST00000120212 883 ntBASIC20.03■□□□□ 0.8
Ssbp1Q9CYR0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssbp1Q9CYR0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ssbp1Q9CYR0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssbp1Q9CYR0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssbp1Q9CYR0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssbp1Q9CYR0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssbp1Q9CYR0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssbp1Q9CYR0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssbp1Q9CYR0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssbp1Q9CYR0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp1Q9CYR0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms