RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Gm35339A0A140LHH9 1649 aa50,15■■■■■ 5,62
Pcf11-204ENSMUST00000208058 NischQ80TM9 1593 aa49,19■■■■■ 5,47
Pcf11-204ENSMUST00000208058 Abcc8B2RUS7 1588 aa47,71■■■■■ 5,23
Pcf11-204ENSMUST00000208058 Abcc9P70170 1546 aa47,64■■■■■ 5,22
Pcf11-204ENSMUST00000208058 ScribQ80U72 1612 aa46,29■■■■■ 5
Pcf11-204ENSMUST00000208058 NacadQ5SWP3 1504 aa44,66■■■■■ 4,74
Pcf11-204ENSMUST00000208058 Kdm5dQ62240 1548 aa44,61■■■■■ 4,73
Pcf11-204ENSMUST00000208058 Dcaf1Q80TR8 1506 aa43,84■■■■■ 4,61
Pcf11-204ENSMUST00000208058 Sycp2Q9CUU3 1500 aa43,83■■■■■ 4,61
Pcf11-204ENSMUST00000208058 BicraF8VPZ9 1578 aa43,33■■■■■ 4,53
Pcf11-204ENSMUST00000208058 Rb1cc1Q9ESK9 1588 aa42,87■■■■■ 4,45
Pcf11-204ENSMUST00000208058 Dnajc5bQ9CQ94 199 aa42,51■■■■■ 4,4
Pcf11-204ENSMUST00000208058 Ccdc180J3QNE4 1664 aa42,25■■■■■ 4,35
Pcf11-204ENSMUST00000208058 Baz1aO88379 1555 aa42,25■■■■■ 4,35
Pcf11-204ENSMUST00000208058 Crybg2B7ZCC2 1516 aa42,11■■■■■ 4,33
Pcf11-204ENSMUST00000208058 Pds5bQ4VA53 1446 aaKnown RBP42,09■■■■■ 4,33
Pcf11-204ENSMUST00000208058 Thoc2B1AZI6 1594 aaKnown RBP42,01■■■■■ 4,32
Pcf11-204ENSMUST00000208058 Rhox8Q6VSS7 320 aa41,9■■■■■ 4,3
Pcf11-204ENSMUST00000208058 Atad2bE9Q166 1460 aaKnown RBP41,65■■■■■ 4,26
Pcf11-204ENSMUST00000208058 Zcchc6Q5BLK4 1491 aaKnown RBP41,59■■■■■ 4,25
Pcf11-204ENSMUST00000208058 Cc2d2aQ8CFW7 1633 aa41,25■■■■■ 4,19
Pcf11-204ENSMUST00000208058 Smarca4Q3TKT4 1613 aaKnown RBP41,21■■■■■ 4,19
Pcf11-204ENSMUST00000208058 Ercc6F8VPZ5 1481 aa41,2■■■■■ 4,19
Pcf11-204ENSMUST00000208058 Smarca2Q6DIC0 1577 aa41,17■■■■■ 4,18
Pcf11-204ENSMUST00000208058 Iqgap2Q3UQ44 1575 aa41,03■■■■■ 4,16
Pcf11-204ENSMUST00000208058 Fam135aQ6NS59 1506 aa40,96■■■■■ 4,15
Pcf11-204ENSMUST00000208058 Cecr2E9Q2Z1 1453 aa40,95■■■■■ 4,15
Pcf11-204ENSMUST00000208058 Wdr62Q3U3T8 1523 aa40,77■■■■■ 4,12
Pcf11-204ENSMUST00000208058 Frmpd1A2AKB4 1549 aa40,67■■■■■ 4,1
Pcf11-204ENSMUST00000208058 Baz1bQ9Z277 1479 aa40,47■■■■■ 4,07
Pcf11-204ENSMUST00000208058 Phldb1Q6PDH0 1371 aaKnown RBP40,46■■■■■ 4,07
Pcf11-204ENSMUST00000208058 Unc13aQ4KUS2 1712 aa40,21■■■■■ 4,03
Pcf11-204ENSMUST00000208058 Rtl1Q7M732 1744 aa40,05■■■■■ 4
Pcf11-204ENSMUST00000208058 Cttnbp2B9EJA2 1648 aa39,98■■■■□ 3,99
Pcf11-204ENSMUST00000208058 Ubl4bQ9CQ84 188 aa39,98■■■■□ 3,99
Pcf11-204ENSMUST00000208058 CftrP26361 1476 aa39,97■■■■□ 3,99
Pcf11-204ENSMUST00000208058 Mrc2Q64449 1479 aa39,94■■■■□ 3,98
Pcf11-204ENSMUST00000208058 Synj1Q8CHC4 1574 aa39,87■■■■□ 3,97
Pcf11-204ENSMUST00000208058 Brd4Q9ESU6 1400 aaKnown RBP39,7■■■■□ 3,95
Pcf11-204ENSMUST00000208058 Ccdc136Q3TVA9 1136 aa39,3■■■■□ 3,88
Pcf11-204ENSMUST00000208058 Lrriq1Q0P5X1 1673 aa39,14■■■■□ 3,86
Pcf11-204ENSMUST00000208058 Cux2P70298 1426 aa39,09■■■■□ 3,85
Pcf11-204ENSMUST00000208058 Rsf1E9PWW9 1441 aaKnown RBP39,07■■■■□ 3,85
Pcf11-204ENSMUST00000208058 Kif15Q6P9L6 1387 aa39,01■■■■□ 3,84
Pcf11-204ENSMUST00000208058 Esf1Q3V1V3 845 aaKnown RBP39,01■■■■□ 3,84
Pcf11-204ENSMUST00000208058 Kif21aQ9QXL2 1672 aa38,98■■■■□ 3,83
Pcf11-204ENSMUST00000208058 Lamc3Q9R0B6 1581 aa38,91■■■■□ 3,82
Pcf11-204ENSMUST00000208058 Dnajc5P60904 198 aa38,8■■■■□ 3,8
Pcf11-204ENSMUST00000208058 Trim41Q5NCC3 630 aa38,78■■■■□ 3,8
Pcf11-204ENSMUST00000208058 Eif4g3Q80XI3 1579 aaKnown RBP38,59■■■■□ 3,77
Pcf11-204ENSMUST00000208058 Npm1Q61937 292 aaKnown RBP38,52■■■■□ 3,76
Pcf11-204ENSMUST00000208058 Cep164Q5DU05 1446 aa38,48■■■■□ 3,75
Pcf11-204ENSMUST00000208058 TnnQ80Z71 1560 aa38,43■■■■□ 3,74
Pcf11-204ENSMUST00000208058 Top2bQ64511 1612 aa38,32■■■■□ 3,73
Pcf11-204ENSMUST00000208058 Urb2E9Q7L1 1524 aaKnown RBP38,31■■■■□ 3,72
Pcf11-204ENSMUST00000208058 Shroom2A2ALU4 1481 aa38,28■■■■□ 3,72
Pcf11-204ENSMUST00000208058 Ccdc18Q640L5 1455 aa38,25■■■■□ 3,71
Pcf11-204ENSMUST00000208058 Dhx29Q6PGC1 1365 aaKnown RBP38,24■■■■□ 3,71
Pcf11-204ENSMUST00000208058 Golga3P55937 1487 aa38,2■■■■□ 3,71
Pcf11-204ENSMUST00000208058 Plb1Q3TTY0 1478 aa38,2■■■■□ 3,71
Pcf11-204ENSMUST00000208058 Camsap1A2AHC3 1581 aa38,18■■■■□ 3,7
Pcf11-204ENSMUST00000208058 Crocc2F6XLV1 1638 aa38,13■■■■□ 3,69
Pcf11-204ENSMUST00000208058 LrpprcQ6PB66 1392 aaKnown RBP38,11■■■■□ 3,69
Pcf11-204ENSMUST00000208058 Il27Q8K3I6 234 aa38,04■■■■□ 3,68
Pcf11-204ENSMUST00000208058 PogzQ8BZH4 1409 aaKnown RBP37,9■■■■□ 3,66
Pcf11-204ENSMUST00000208058 Cngb1E1AZ71 1325 aa37,87■■■■□ 3,65
Pcf11-204ENSMUST00000208058 Rusc2Q80U22 1514 aa37,87■■■■□ 3,65
Pcf11-204ENSMUST00000208058 Fmn1Q05860 1466 aa37,87■■■■□ 3,65
Pcf11-204ENSMUST00000208058 Ift140E9PY46 1464 aa37,86■■■■□ 3,65
Pcf11-204ENSMUST00000208058 Col17a1Q07563 1470 aa37,78■■■■□ 3,64
Pcf11-204ENSMUST00000208058 Duox2A2AQ99 1517 aa37,7■■■■□ 3,63
Pcf11-204ENSMUST00000208058 Pabpn1Q8CCS6 302 aaKnown RBP37,65■■■■□ 3,62
Pcf11-204ENSMUST00000208058 Grin2bQ01097 1482 aa37,59■■■■□ 3,61
Pcf11-204ENSMUST00000208058 Disp1Q3TDN0 1521 aa37,55■■■■□ 3,6
Pcf11-204ENSMUST00000208058 Samd9lQ69Z37 1561 aa37,49■■■■□ 3,59
Pcf11-204ENSMUST00000208058 Setd1bQ8CFT2 1985 aa37,47■■■■□ 3,59
Pcf11-204ENSMUST00000208058 Pbrm1Q8BSQ9 1634 aaKnown RBP37,47■■■■□ 3,59
Pcf11-204ENSMUST00000208058 Nup160Q9Z0W3 1402 aaKnown RBP37,43■■■■□ 3,58
Pcf11-204ENSMUST00000208058 Zcchc11B2RX14 1644 aaKnown RBP37,39■■■■□ 3,58
Pcf11-204ENSMUST00000208058 Pelp1Q9DBD5 1123 aaKnown RBP37,35■■■■□ 3,57
Pcf11-204ENSMUST00000208058 Cc2d2bA0A286YDU8 1405 aa37,34■■■■□ 3,57
Pcf11-204ENSMUST00000208058 Efcab5A0JP43 1406 aa37,32■■■■□ 3,56
Pcf11-204ENSMUST00000208058 Rad54l2Q99NG0 1466 aa37,14■■■■□ 3,54
Pcf11-204ENSMUST00000208058 Magi3Q9EQJ9 1476 aa37,13■■■■□ 3,54
Pcf11-204ENSMUST00000208058 Grin2aP35436 1464 aa37,13■■■■□ 3,53
Pcf11-204ENSMUST00000208058 Top2aQ01320 1528 aaKnown RBP37,11■■■■□ 3,53
Pcf11-204ENSMUST00000208058 AqrQ8CFQ3 1481 aaKnown RBP37,1■■■■□ 3,53
Pcf11-204ENSMUST00000208058 Ccdc88bQ4QRL3 1481 aa37,09■■■■□ 3,53
Pcf11-204ENSMUST00000208058 NrkQ9R0G8 1455 aa37,07■■■■□ 3,53
Pcf11-204ENSMUST00000208058 Gpatch8A2A6A1 1505 aa37,01■■■■□ 3,52
Pcf11-204ENSMUST00000208058 Fgd6Q69ZL1 1399 aa36,96■■■■□ 3,51
Pcf11-204ENSMUST00000208058 Shroom4Q1W617 1475 aa36,89■■■■□ 3,5
Pcf11-204ENSMUST00000208058 Adgrl3Q80TS3 1537 aa36,89■■■■□ 3,5
Pcf11-204ENSMUST00000208058 Cep170Q6A065 1588 aa36,87■■■■□ 3,49
Pcf11-204ENSMUST00000208058 Pla2r1Q62028 1487 aa36,87■■■■□ 3,49
Pcf11-204ENSMUST00000208058 PtprkP35822 1457 aa36,85■■■■□ 3,49
Pcf11-204ENSMUST00000208058 SynmQ70IV5 1561 aa36,84■■■■□ 3,49
Pcf11-204ENSMUST00000208058 Gapvd1Q6PAR5 1458 aa36,82■■■■□ 3,48
Pcf11-204ENSMUST00000208058 Arhgef5E9Q7D5 1581 aa36,76■■■■□ 3,48
Pcf11-204ENSMUST00000208058 Abcc1O35379 1528 aa36,69■■■■□ 3,46
Retrieved 100 of 22,080 RNA–protein pairs in 38,3 ms