Protein–RNA interactions for Protein: Q9CR99

4930544G11Rik, RIKEN cDNA 4930544G11, mousemouse

Predictions only

Length 193 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930544G11RikQ9CR99 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
4930544G11RikQ9CR99 Gm25239-201ENSMUST00000174915 86 ntBASIC22.44■■□□□ 1.18
4930544G11RikQ9CR99 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
4930544G11RikQ9CR99 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
4930544G11RikQ9CR99 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
4930544G11RikQ9CR99 Psd-208ENSMUST00000224556 2034 ntBASIC21.72■■□□□ 1.07
4930544G11RikQ9CR99 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
4930544G11RikQ9CR99 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
4930544G11RikQ9CR99 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
4930544G11RikQ9CR99 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
4930544G11RikQ9CR99 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
4930544G11RikQ9CR99 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
4930544G11RikQ9CR99 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
4930544G11RikQ9CR99 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
4930544G11RikQ9CR99 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
4930544G11RikQ9CR99 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
4930544G11RikQ9CR99 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
4930544G11RikQ9CR99 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
4930544G11RikQ9CR99 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
4930544G11RikQ9CR99 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
4930544G11RikQ9CR99 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
4930544G11RikQ9CR99 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.42■□□□□ 0.86
4930544G11RikQ9CR99 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
4930544G11RikQ9CR99 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
4930544G11RikQ9CR99 Gm15042-201ENSMUST00000120212 883 ntBASIC20.33■□□□□ 0.85
4930544G11RikQ9CR99 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4930544G11RikQ9CR99 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4930544G11RikQ9CR99 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
4930544G11RikQ9CR99 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
4930544G11RikQ9CR99 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
4930544G11RikQ9CR99 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
4930544G11RikQ9CR99 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.93■□□□□ 0.78
4930544G11RikQ9CR99 Gm15045-201ENSMUST00000117359 883 ntBASIC19.93■□□□□ 0.78
4930544G11RikQ9CR99 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
4930544G11RikQ9CR99 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
4930544G11RikQ9CR99 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
4930544G11RikQ9CR99 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
4930544G11RikQ9CR99 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
4930544G11RikQ9CR99 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
4930544G11RikQ9CR99 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
4930544G11RikQ9CR99 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.79■□□□□ 0.76
4930544G11RikQ9CR99 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
4930544G11RikQ9CR99 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
4930544G11RikQ9CR99 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.71■□□□□ 0.75
4930544G11RikQ9CR99 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.69■□□□□ 0.74
4930544G11RikQ9CR99 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.68■□□□□ 0.74
4930544G11RikQ9CR99 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
4930544G11RikQ9CR99 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
4930544G11RikQ9CR99 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.62■□□□□ 0.73
4930544G11RikQ9CR99 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
4930544G11RikQ9CR99 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
4930544G11RikQ9CR99 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
4930544G11RikQ9CR99 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
4930544G11RikQ9CR99 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
4930544G11RikQ9CR99 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
4930544G11RikQ9CR99 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
4930544G11RikQ9CR99 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.48■□□□□ 0.71
4930544G11RikQ9CR99 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
4930544G11RikQ9CR99 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
4930544G11RikQ9CR99 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
4930544G11RikQ9CR99 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
4930544G11RikQ9CR99 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
4930544G11RikQ9CR99 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
4930544G11RikQ9CR99 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.37■□□□□ 0.69
4930544G11RikQ9CR99 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
4930544G11RikQ9CR99 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
4930544G11RikQ9CR99 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
4930544G11RikQ9CR99 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
4930544G11RikQ9CR99 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
4930544G11RikQ9CR99 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
4930544G11RikQ9CR99 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
4930544G11RikQ9CR99 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
4930544G11RikQ9CR99 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
4930544G11RikQ9CR99 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
4930544G11RikQ9CR99 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
4930544G11RikQ9CR99 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
4930544G11RikQ9CR99 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
4930544G11RikQ9CR99 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
4930544G11RikQ9CR99 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
4930544G11RikQ9CR99 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
4930544G11RikQ9CR99 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
4930544G11RikQ9CR99 Gm24109-201ENSMUST00000175489 103 ntBASIC19.05■□□□□ 0.64
4930544G11RikQ9CR99 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
4930544G11RikQ9CR99 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19■□□□□ 0.63
4930544G11RikQ9CR99 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
4930544G11RikQ9CR99 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4930544G11RikQ9CR99 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4930544G11RikQ9CR99 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4930544G11RikQ9CR99 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4930544G11RikQ9CR99 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
4930544G11RikQ9CR99 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
4930544G11RikQ9CR99 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
4930544G11RikQ9CR99 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
4930544G11RikQ9CR99 Gm23366-201ENSMUST00000175022 89 ntBASIC18.87■□□□□ 0.61
4930544G11RikQ9CR99 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4930544G11RikQ9CR99 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
4930544G11RikQ9CR99 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4930544G11RikQ9CR99 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4930544G11RikQ9CR99 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4930544G11RikQ9CR99 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms