Protein–RNA interactions for Protein: Q8VE85

Prelid3a, PRELI domain containing protein 3A, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prelid3aQ8VE85 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prelid3aQ8VE85 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Prelid3aQ8VE85 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Prelid3aQ8VE85 Psd-208ENSMUST00000224556 2034 ntBASIC22.3■■□□□ 1.16
Prelid3aQ8VE85 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prelid3aQ8VE85 Gm25239-201ENSMUST00000174915 86 ntBASIC22.17■■□□□ 1.14
Prelid3aQ8VE85 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prelid3aQ8VE85 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Prelid3aQ8VE85 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prelid3aQ8VE85 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prelid3aQ8VE85 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prelid3aQ8VE85 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Prelid3aQ8VE85 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Prelid3aQ8VE85 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prelid3aQ8VE85 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prelid3aQ8VE85 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prelid3aQ8VE85 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prelid3aQ8VE85 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prelid3aQ8VE85 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prelid3aQ8VE85 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prelid3aQ8VE85 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prelid3aQ8VE85 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.74■□□□□ 0.91
Prelid3aQ8VE85 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Prelid3aQ8VE85 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prelid3aQ8VE85 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prelid3aQ8VE85 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prelid3aQ8VE85 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prelid3aQ8VE85 Gm15042-201ENSMUST00000120212 883 ntBASIC20.32■□□□□ 0.84
Prelid3aQ8VE85 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prelid3aQ8VE85 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.31■□□□□ 0.84
Prelid3aQ8VE85 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prelid3aQ8VE85 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.14■□□□□ 0.81
Prelid3aQ8VE85 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.14■□□□□ 0.81
Prelid3aQ8VE85 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prelid3aQ8VE85 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.1■□□□□ 0.81
Prelid3aQ8VE85 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prelid3aQ8VE85 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.06■□□□□ 0.8
Prelid3aQ8VE85 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prelid3aQ8VE85 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prelid3aQ8VE85 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prelid3aQ8VE85 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prelid3aQ8VE85 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prelid3aQ8VE85 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.02■□□□□ 0.8
Prelid3aQ8VE85 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prelid3aQ8VE85 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prelid3aQ8VE85 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.96■□□□□ 0.79
Prelid3aQ8VE85 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prelid3aQ8VE85 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prelid3aQ8VE85 Gm15045-201ENSMUST00000117359 883 ntBASIC19.92■□□□□ 0.78
Prelid3aQ8VE85 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prelid3aQ8VE85 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prelid3aQ8VE85 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prelid3aQ8VE85 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prelid3aQ8VE85 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prelid3aQ8VE85 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prelid3aQ8VE85 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.83■□□□□ 0.76
Prelid3aQ8VE85 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prelid3aQ8VE85 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Prelid3aQ8VE85 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prelid3aQ8VE85 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prelid3aQ8VE85 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prelid3aQ8VE85 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prelid3aQ8VE85 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prelid3aQ8VE85 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prelid3aQ8VE85 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prelid3aQ8VE85 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Prelid3aQ8VE85 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prelid3aQ8VE85 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prelid3aQ8VE85 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prelid3aQ8VE85 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prelid3aQ8VE85 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Prelid3aQ8VE85 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prelid3aQ8VE85 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Prelid3aQ8VE85 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prelid3aQ8VE85 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prelid3aQ8VE85 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prelid3aQ8VE85 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prelid3aQ8VE85 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Prelid3aQ8VE85 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prelid3aQ8VE85 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.37■□□□□ 0.69
Prelid3aQ8VE85 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prelid3aQ8VE85 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prelid3aQ8VE85 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prelid3aQ8VE85 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prelid3aQ8VE85 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prelid3aQ8VE85 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prelid3aQ8VE85 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prelid3aQ8VE85 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prelid3aQ8VE85 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prelid3aQ8VE85 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prelid3aQ8VE85 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Prelid3aQ8VE85 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.13■□□□□ 0.65
Prelid3aQ8VE85 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prelid3aQ8VE85 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prelid3aQ8VE85 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prelid3aQ8VE85 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prelid3aQ8VE85 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prelid3aQ8VE85 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Prelid3aQ8VE85 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prelid3aQ8VE85 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms