Protein–RNA interactions for Protein: A0A087WSG3

Gm28269, MCG1047152, mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28269A0A087WSG3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm28269A0A087WSG3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Gm28269A0A087WSG3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Gm28269A0A087WSG3 Gm25239-201ENSMUST00000174915 86 ntBASIC22.34■■□□□ 1.17
Gm28269A0A087WSG3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Gm28269A0A087WSG3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Gm28269A0A087WSG3 Psd-208ENSMUST00000224556 2034 ntBASIC21.53■■□□□ 1.04
Gm28269A0A087WSG3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Gm28269A0A087WSG3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28269A0A087WSG3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28269A0A087WSG3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28269A0A087WSG3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28269A0A087WSG3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28269A0A087WSG3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28269A0A087WSG3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Gm28269A0A087WSG3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm28269A0A087WSG3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm28269A0A087WSG3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28269A0A087WSG3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28269A0A087WSG3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28269A0A087WSG3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28269A0A087WSG3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28269A0A087WSG3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm28269A0A087WSG3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28269A0A087WSG3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28269A0A087WSG3 Gm15042-201ENSMUST00000120212 883 ntBASIC20.27■□□□□ 0.84
Gm28269A0A087WSG3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28269A0A087WSG3 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.21■□□□□ 0.83
Gm28269A0A087WSG3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.18■□□□□ 0.82
Gm28269A0A087WSG3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28269A0A087WSG3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28269A0A087WSG3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm28269A0A087WSG3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28269A0A087WSG3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Gm28269A0A087WSG3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28269A0A087WSG3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28269A0A087WSG3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28269A0A087WSG3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28269A0A087WSG3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28269A0A087WSG3 Gm15045-201ENSMUST00000117359 883 ntBASIC19.85■□□□□ 0.77
Gm28269A0A087WSG3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm28269A0A087WSG3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28269A0A087WSG3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28269A0A087WSG3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28269A0A087WSG3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm28269A0A087WSG3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28269A0A087WSG3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28269A0A087WSG3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.59■□□□□ 0.73
Gm28269A0A087WSG3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.56■□□□□ 0.72
Gm28269A0A087WSG3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28269A0A087WSG3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.52■□□□□ 0.71
Gm28269A0A087WSG3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28269A0A087WSG3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28269A0A087WSG3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gm28269A0A087WSG3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm28269A0A087WSG3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28269A0A087WSG3 Zxda-201ENSMUST00000117281 2621 ntBASIC19.49■□□□□ 0.71
Gm28269A0A087WSG3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28269A0A087WSG3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28269A0A087WSG3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm28269A0A087WSG3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28269A0A087WSG3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28269A0A087WSG3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm28269A0A087WSG3 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.37■□□□□ 0.69
Gm28269A0A087WSG3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm28269A0A087WSG3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm28269A0A087WSG3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28269A0A087WSG3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28269A0A087WSG3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Gm28269A0A087WSG3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28269A0A087WSG3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28269A0A087WSG3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28269A0A087WSG3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28269A0A087WSG3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28269A0A087WSG3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28269A0A087WSG3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28269A0A087WSG3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28269A0A087WSG3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm28269A0A087WSG3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28269A0A087WSG3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm28269A0A087WSG3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28269A0A087WSG3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Gm28269A0A087WSG3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm28269A0A087WSG3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm28269A0A087WSG3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm28269A0A087WSG3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm28269A0A087WSG3 Gm24109-201ENSMUST00000175489 103 ntBASIC18.98■□□□□ 0.63
Gm28269A0A087WSG3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28269A0A087WSG3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28269A0A087WSG3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28269A0A087WSG3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28269A0A087WSG3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm28269A0A087WSG3 Gm23366-201ENSMUST00000175022 89 ntBASIC18.88■□□□□ 0.61
Gm28269A0A087WSG3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28269A0A087WSG3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28269A0A087WSG3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28269A0A087WSG3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28269A0A087WSG3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28269A0A087WSG3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Gm28269A0A087WSG3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms