Protein–RNA interactions for Protein: A0A0J9YUQ2

Gm42420, Predicted gene, 42420 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42420A0A0J9YUQ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,13■■□□□ 1,77
Gm42420A0A0J9YUQ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Gm42420A0A0J9YUQ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Gm42420A0A0J9YUQ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,81■■□□□ 1,56
Gm42420A0A0J9YUQ2 Psd-208ENSMUST00000224556 2034 ntBASIC24,66■■□□□ 1,54
Gm42420A0A0J9YUQ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Gm42420A0A0J9YUQ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
Gm42420A0A0J9YUQ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,73■■□□□ 1,39
Gm42420A0A0J9YUQ2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,72■■□□□ 1,39
Gm42420A0A0J9YUQ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,61■■□□□ 1,37
Gm42420A0A0J9YUQ2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Gm42420A0A0J9YUQ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Gm42420A0A0J9YUQ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,57■■□□□ 1,36
Gm42420A0A0J9YUQ2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,55■■□□□ 1,36
Gm42420A0A0J9YUQ2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23,53■■□□□ 1,36
Gm42420A0A0J9YUQ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,29■■□□□ 1,32
Gm42420A0A0J9YUQ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,25■■□□□ 1,31
Gm42420A0A0J9YUQ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,23■■□□□ 1,31
Gm42420A0A0J9YUQ2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Gm42420A0A0J9YUQ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Gm42420A0A0J9YUQ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,15■■□□□ 1,3
Gm42420A0A0J9YUQ2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,13■■□□□ 1,29
Gm42420A0A0J9YUQ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Gm42420A0A0J9YUQ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,03■■□□□ 1,28
Gm42420A0A0J9YUQ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Gm42420A0A0J9YUQ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Gm42420A0A0J9YUQ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Gm42420A0A0J9YUQ2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Gm42420A0A0J9YUQ2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,64■■□□□ 1,21
Gm42420A0A0J9YUQ2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,56■■□□□ 1,2
Gm42420A0A0J9YUQ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,54■■□□□ 1,2
Gm42420A0A0J9YUQ2 Gm25239-201ENSMUST00000174915 86 ntBASIC22,46■■□□□ 1,19
Gm42420A0A0J9YUQ2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,42■■□□□ 1,18
Gm42420A0A0J9YUQ2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,34■■□□□ 1,17
Gm42420A0A0J9YUQ2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Gm42420A0A0J9YUQ2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Gm42420A0A0J9YUQ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,2■■□□□ 1,14
Gm42420A0A0J9YUQ2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22,19■■□□□ 1,14
Gm42420A0A0J9YUQ2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22,18■■□□□ 1,14
Gm42420A0A0J9YUQ2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22,18■■□□□ 1,14
Gm42420A0A0J9YUQ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Gm42420A0A0J9YUQ2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,09■■□□□ 1,13
Gm42420A0A0J9YUQ2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Gm42420A0A0J9YUQ2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,05■■□□□ 1,12
Gm42420A0A0J9YUQ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,04■■□□□ 1,12
Gm42420A0A0J9YUQ2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Gm42420A0A0J9YUQ2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22,02■■□□□ 1,12
Gm42420A0A0J9YUQ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,02■■□□□ 1,11
Gm42420A0A0J9YUQ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,01■■□□□ 1,11
Gm42420A0A0J9YUQ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
Gm42420A0A0J9YUQ2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,99■■□□□ 1,11
Gm42420A0A0J9YUQ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,99■■□□□ 1,11
Gm42420A0A0J9YUQ2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,94■■□□□ 1,1
Gm42420A0A0J9YUQ2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,91■■□□□ 1,1
Gm42420A0A0J9YUQ2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Gm42420A0A0J9YUQ2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Gm42420A0A0J9YUQ2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21,72■■□□□ 1,07
Gm42420A0A0J9YUQ2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,7■■□□□ 1,06
Gm42420A0A0J9YUQ2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Gm42420A0A0J9YUQ2 Zxda-201ENSMUST00000117281 2621 ntBASIC21,69■■□□□ 1,06
Gm42420A0A0J9YUQ2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Gm42420A0A0J9YUQ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,64■■□□□ 1,05
Gm42420A0A0J9YUQ2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,62■■□□□ 1,05
Gm42420A0A0J9YUQ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,59■■□□□ 1,05
Gm42420A0A0J9YUQ2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Gm42420A0A0J9YUQ2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Gm42420A0A0J9YUQ2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21,49■■□□□ 1,03
Gm42420A0A0J9YUQ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Gm42420A0A0J9YUQ2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,03
Gm42420A0A0J9YUQ2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Gm42420A0A0J9YUQ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,41■■□□□ 1,02
Gm42420A0A0J9YUQ2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21,36■■□□□ 1,01
Gm42420A0A0J9YUQ2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Gm42420A0A0J9YUQ2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21,33■■□□□ 1,01
Gm42420A0A0J9YUQ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,32■■□□□ 1
Gm42420A0A0J9YUQ2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,31■■□□□ 1
Gm42420A0A0J9YUQ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21,31■■□□□ 1
Gm42420A0A0J9YUQ2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Gm42420A0A0J9YUQ2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21,28■■□□□ 1
Gm42420A0A0J9YUQ2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21,27■□□□□ 0,99
Gm42420A0A0J9YUQ2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Gm42420A0A0J9YUQ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Gm42420A0A0J9YUQ2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21,25■□□□□ 0,99
Gm42420A0A0J9YUQ2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21,25■□□□□ 0,99
Gm42420A0A0J9YUQ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21,2■□□□□ 0,98
Gm42420A0A0J9YUQ2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21,16■□□□□ 0,98
Gm42420A0A0J9YUQ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21,14■□□□□ 0,97
Gm42420A0A0J9YUQ2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Gm42420A0A0J9YUQ2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Gm42420A0A0J9YUQ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,12■□□□□ 0,97
Gm42420A0A0J9YUQ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,12■□□□□ 0,97
Gm42420A0A0J9YUQ2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Gm42420A0A0J9YUQ2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Gm42420A0A0J9YUQ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21,08■□□□□ 0,97
Gm42420A0A0J9YUQ2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21,08■□□□□ 0,96
Gm42420A0A0J9YUQ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,07■□□□□ 0,96
Gm42420A0A0J9YUQ2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21,07■□□□□ 0,96
Gm42420A0A0J9YUQ2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Gm42420A0A0J9YUQ2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21,05■□□□□ 0,96
Gm42420A0A0J9YUQ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21,04■□□□□ 0,96
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms