Protein–RNA interactions for Protein: Q70KL3

Defb39, Beta-defensin 39, mousemouse

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb39Q70KL3 Gm25239-201ENSMUST00000174915 86 ntBASIC22.37■■□□□ 1.17
Defb39Q70KL3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Defb39Q70KL3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Defb39Q70KL3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Defb39Q70KL3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Defb39Q70KL3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Defb39Q70KL3 Gm15042-201ENSMUST00000120212 883 ntBASIC19.86■□□□□ 0.77
Defb39Q70KL3 Gm15045-201ENSMUST00000117359 883 ntBASIC19.43■□□□□ 0.7
Defb39Q70KL3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Defb39Q70KL3 Gm24109-201ENSMUST00000175489 103 ntBASIC19.22■□□□□ 0.67
Defb39Q70KL3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Defb39Q70KL3 Psd-208ENSMUST00000224556 2034 ntBASIC19.1■□□□□ 0.65
Defb39Q70KL3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.95■□□□□ 0.62
Defb39Q70KL3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Defb39Q70KL3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Defb39Q70KL3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Defb39Q70KL3 Gm23366-201ENSMUST00000175022 89 ntBASIC18.78■□□□□ 0.6
Defb39Q70KL3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Defb39Q70KL3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Defb39Q70KL3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Defb39Q70KL3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb39Q70KL3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb39Q70KL3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb39Q70KL3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb39Q70KL3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defb39Q70KL3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.48■□□□□ 0.55
Defb39Q70KL3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb39Q70KL3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb39Q70KL3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Defb39Q70KL3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Defb39Q70KL3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Defb39Q70KL3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.28■□□□□ 0.52
Defb39Q70KL3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.2■□□□□ 0.5
Defb39Q70KL3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Defb39Q70KL3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Defb39Q70KL3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Defb39Q70KL3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Defb39Q70KL3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Defb39Q70KL3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18■□□□□ 0.47
Defb39Q70KL3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Defb39Q70KL3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Defb39Q70KL3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Defb39Q70KL3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Defb39Q70KL3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.74■□□□□ 0.43
Defb39Q70KL3 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.71■□□□□ 0.43
Defb39Q70KL3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb39Q70KL3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Defb39Q70KL3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.7■□□□□ 0.42
Defb39Q70KL3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Defb39Q70KL3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Defb39Q70KL3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Defb39Q70KL3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Defb39Q70KL3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Defb39Q70KL3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Defb39Q70KL3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.58■□□□□ 0.4
Defb39Q70KL3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Defb39Q70KL3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Defb39Q70KL3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Defb39Q70KL3 Gm25238-201ENSMUST00000174914 89 ntBASIC17.52■□□□□ 0.4
Defb39Q70KL3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Defb39Q70KL3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Defb39Q70KL3 Gm27325-201ENSMUST00000175467 74 ntBASIC17.45■□□□□ 0.38
Defb39Q70KL3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Defb39Q70KL3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Defb39Q70KL3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.4■□□□□ 0.38
Defb39Q70KL3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Defb39Q70KL3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Defb39Q70KL3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.37■□□□□ 0.37
Defb39Q70KL3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.36■□□□□ 0.37
Defb39Q70KL3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Defb39Q70KL3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Defb39Q70KL3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Defb39Q70KL3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Defb39Q70KL3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Defb39Q70KL3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Defb39Q70KL3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Defb39Q70KL3 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.25■□□□□ 0.35
Defb39Q70KL3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Defb39Q70KL3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Defb39Q70KL3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.15■□□□□ 0.34
Defb39Q70KL3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.14■□□□□ 0.33
Defb39Q70KL3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Defb39Q70KL3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Defb39Q70KL3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Defb39Q70KL3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Defb39Q70KL3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.05■□□□□ 0.32
Defb39Q70KL3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Defb39Q70KL3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Defb39Q70KL3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Defb39Q70KL3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Defb39Q70KL3 Rab21-202ENSMUST00000218831 843 ntBASIC16.98■□□□□ 0.31
Defb39Q70KL3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Defb39Q70KL3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Defb39Q70KL3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.93■□□□□ 0.3
Defb39Q70KL3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Defb39Q70KL3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Defb39Q70KL3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Defb39Q70KL3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.88■□□□□ 0.29
Defb39Q70KL3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Defb39Q70KL3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms