Protein–RNA interactions for Protein: P28311

Defa4, Alpha-defensin 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa4P28311 Gm25239-201ENSMUST00000174915 86 ntBASIC22.6■■□□□ 1.21
Defa4P28311 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Defa4P28311 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Defa4P28311 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defa4P28311 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Defa4P28311 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Defa4P28311 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Defa4P28311 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Defa4P28311 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Defa4P28311 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Defa4P28311 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Defa4P28311 Psd-208ENSMUST00000224556 2034 ntBASIC20.36■□□□□ 0.85
Defa4P28311 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defa4P28311 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Defa4P28311 Gm15042-201ENSMUST00000120212 883 ntBASIC20.21■□□□□ 0.83
Defa4P28311 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Defa4P28311 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Defa4P28311 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Defa4P28311 Gm15045-201ENSMUST00000117359 883 ntBASIC19.75■□□□□ 0.75
Defa4P28311 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.68■□□□□ 0.74
Defa4P28311 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.67■□□□□ 0.74
Defa4P28311 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Defa4P28311 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Defa4P28311 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Defa4P28311 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Defa4P28311 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Defa4P28311 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Defa4P28311 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Defa4P28311 Gm24109-201ENSMUST00000175489 103 ntBASIC19.38■□□□□ 0.69
Defa4P28311 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Defa4P28311 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Defa4P28311 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Defa4P28311 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Defa4P28311 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Defa4P28311 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Defa4P28311 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Defa4P28311 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Defa4P28311 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Defa4P28311 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Defa4P28311 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Defa4P28311 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Defa4P28311 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Defa4P28311 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Defa4P28311 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Defa4P28311 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Defa4P28311 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Defa4P28311 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Defa4P28311 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Defa4P28311 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19■□□□□ 0.63
Defa4P28311 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Defa4P28311 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Defa4P28311 Gm23366-201ENSMUST00000175022 89 ntBASIC18.95■□□□□ 0.62
Defa4P28311 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.93■□□□□ 0.62
Defa4P28311 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Defa4P28311 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Defa4P28311 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Defa4P28311 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defa4P28311 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defa4P28311 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defa4P28311 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Defa4P28311 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Defa4P28311 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Defa4P28311 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Defa4P28311 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Defa4P28311 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.65■□□□□ 0.58
Defa4P28311 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Defa4P28311 AC153911.1-202ENSMUST00000218534 1034 ntBASIC18.61■□□□□ 0.57
Defa4P28311 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defa4P28311 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.59■□□□□ 0.57
Defa4P28311 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Defa4P28311 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defa4P28311 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.57■□□□□ 0.56
Defa4P28311 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defa4P28311 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Defa4P28311 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defa4P28311 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Defa4P28311 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Defa4P28311 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Defa4P28311 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Defa4P28311 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defa4P28311 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Defa4P28311 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18.46■□□□□ 0.54
Defa4P28311 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Defa4P28311 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Defa4P28311 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Defa4P28311 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Defa4P28311 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defa4P28311 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Defa4P28311 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Defa4P28311 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Defa4P28311 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Defa4P28311 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Defa4P28311 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Defa4P28311 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Defa4P28311 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Defa4P28311 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Defa4P28311 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Defa4P28311 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Defa4P28311 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Defa4P28311 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms