Protein–RNA interactions for Protein: A0A1B0GRB6

Brd3os, Bromodomain-containing 3, opposite strand, mousemouse

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd3osA0A1B0GRB6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Brd3osA0A1B0GRB6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Brd3osA0A1B0GRB6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Brd3osA0A1B0GRB6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Brd3osA0A1B0GRB6 Psd-208ENSMUST00000224556 2034 ntBASIC23.01■■□□□ 1.27
Brd3osA0A1B0GRB6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Brd3osA0A1B0GRB6 Gm25239-201ENSMUST00000174915 86 ntBASIC22.26■■□□□ 1.15
Brd3osA0A1B0GRB6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Brd3osA0A1B0GRB6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Brd3osA0A1B0GRB6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Brd3osA0A1B0GRB6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Brd3osA0A1B0GRB6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Brd3osA0A1B0GRB6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Brd3osA0A1B0GRB6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Brd3osA0A1B0GRB6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Brd3osA0A1B0GRB6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Brd3osA0A1B0GRB6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Brd3osA0A1B0GRB6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Brd3osA0A1B0GRB6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Brd3osA0A1B0GRB6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.08■□□□□ 0.97
Brd3osA0A1B0GRB6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brd3osA0A1B0GRB6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brd3osA0A1B0GRB6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Brd3osA0A1B0GRB6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brd3osA0A1B0GRB6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brd3osA0A1B0GRB6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Brd3osA0A1B0GRB6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brd3osA0A1B0GRB6 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.86■□□□□ 0.93
Brd3osA0A1B0GRB6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.85■□□□□ 0.93
Brd3osA0A1B0GRB6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.81■□□□□ 0.92
Brd3osA0A1B0GRB6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Brd3osA0A1B0GRB6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brd3osA0A1B0GRB6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Brd3osA0A1B0GRB6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Brd3osA0A1B0GRB6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Brd3osA0A1B0GRB6 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.47■□□□□ 0.87
Brd3osA0A1B0GRB6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brd3osA0A1B0GRB6 Gm15042-201ENSMUST00000120212 883 ntBASIC20.43■□□□□ 0.86
Brd3osA0A1B0GRB6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Brd3osA0A1B0GRB6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Brd3osA0A1B0GRB6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Brd3osA0A1B0GRB6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brd3osA0A1B0GRB6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brd3osA0A1B0GRB6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.36■□□□□ 0.85
Brd3osA0A1B0GRB6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brd3osA0A1B0GRB6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brd3osA0A1B0GRB6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.29■□□□□ 0.84
Brd3osA0A1B0GRB6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Brd3osA0A1B0GRB6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Brd3osA0A1B0GRB6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brd3osA0A1B0GRB6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brd3osA0A1B0GRB6 Gm15045-201ENSMUST00000117359 883 ntBASIC20.11■□□□□ 0.81
Brd3osA0A1B0GRB6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Brd3osA0A1B0GRB6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Brd3osA0A1B0GRB6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brd3osA0A1B0GRB6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Brd3osA0A1B0GRB6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Brd3osA0A1B0GRB6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.01■□□□□ 0.79
Brd3osA0A1B0GRB6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brd3osA0A1B0GRB6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brd3osA0A1B0GRB6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brd3osA0A1B0GRB6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd3osA0A1B0GRB6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd3osA0A1B0GRB6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brd3osA0A1B0GRB6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brd3osA0A1B0GRB6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brd3osA0A1B0GRB6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brd3osA0A1B0GRB6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brd3osA0A1B0GRB6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brd3osA0A1B0GRB6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brd3osA0A1B0GRB6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Brd3osA0A1B0GRB6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Brd3osA0A1B0GRB6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brd3osA0A1B0GRB6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.73■□□□□ 0.75
Brd3osA0A1B0GRB6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.71■□□□□ 0.75
Brd3osA0A1B0GRB6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.69■□□□□ 0.74
Brd3osA0A1B0GRB6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brd3osA0A1B0GRB6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brd3osA0A1B0GRB6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brd3osA0A1B0GRB6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.62■□□□□ 0.73
Brd3osA0A1B0GRB6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brd3osA0A1B0GRB6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brd3osA0A1B0GRB6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brd3osA0A1B0GRB6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brd3osA0A1B0GRB6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brd3osA0A1B0GRB6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Brd3osA0A1B0GRB6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Brd3osA0A1B0GRB6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Brd3osA0A1B0GRB6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Brd3osA0A1B0GRB6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brd3osA0A1B0GRB6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Brd3osA0A1B0GRB6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Brd3osA0A1B0GRB6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brd3osA0A1B0GRB6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brd3osA0A1B0GRB6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brd3osA0A1B0GRB6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brd3osA0A1B0GRB6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brd3osA0A1B0GRB6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brd3osA0A1B0GRB6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Brd3osA0A1B0GRB6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms