RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 NbeaQ9EPN1 2936 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Defa23Q5G866 93 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 H2al1aQ5M8Q2 105 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Krtap16-1A2A5X5 502 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Gm5142Q8C5X9 133 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Crlf1Q9JM58 425 aa12.47□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Trav9d-3A0A075B695 113 aa12.46□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Ucn2Q99ML8 113 aa12.46□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 4930535I16RikQ9CUI2 172 aa12.46□□□□□ -0.41
Sqstm1-201ENSMUST00000015981 Gm10845Q3UNY9 185 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Trav13d-4A0A0G2JFX3 110 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Gm3443F7CCV5 94 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Rpl39lQ9CQD0 51 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Q9DAA7 145 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Trav13-1A0A075B644 110 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Fam19a1Q7TPG8 133 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 MobpQ9D2P8 170 aa12.45□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Gcn1E9PVA8 2671 aaKnown RBP12.44□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 E130208F15RikQ3UPV3 143 aa12.44□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Ighv1-49A0A0A6YWX2 117 aa12.44□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 EnhoQ8K1D8 76 aa12.43□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Abca2P41234 2434 aa12.43□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Bles03Q8VD62 251 aa12.43□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Nop10Q9CQS2 64 aa12.43□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Gm10772F7AIG4 85 aa12.42□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Gm10308Q9CVR5 141 aa12.42□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Ighv13-2A0A0A6YWN3 119 aa12.41□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 B230307C23RikQ8BLB2 64 aa12.41□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Igkv8-21A0A140T8P7 120 aa12.4□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Defb42Q8BVB5 75 aa12.4□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Brk1Q91VR8 75 aa12.4□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Celsr2Q9R0M0 2920 aa12.4□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Helz2E9QAM5 2947 aaKnown RBP12.4□□□□□ -0.42
Sqstm1-201ENSMUST00000015981 Ormdl1Q921I0 153 aa12.39□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Lrrk2Q5S006 2527 aa12.39□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Igkv2-109A0A075B5K6 120 aa12.38□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Cox7a1P56392 80 aa12.38□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 OtoglF7A4A7 2325 aa12.38□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 PrlhG3UWC3 86 aa12.38□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Ighv10-3A0A075B5T6 119 aa12.37□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Ighv1-59A0A0A6YXE0 117 aa12.37□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Ubl5Q9EPV8 73 aa12.37□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Gm9903Q8C9Y8 129 aa12.36□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Kmt2bO08550 2713 aa12.36□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Fam229bQ8CF36 80 aa12.36□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 CrygeQ03740 174 aa12.34□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Lypd5Q9D7Z7 256 aa12.34□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Ncor2Q9WU42 2472 aaKnown RBP12.34□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 MplkipQ9D011 178 aa12.34□□□□□ -0.43
Sqstm1-201ENSMUST00000015981 Igkv8-18A0A0B4J1J3 123 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Chchd7Q8K2Q5 85 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 BaalcQ8VHV1 145 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Tomm7Q9D173 55 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Ighv2-9A0A075B5Q5 116 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gm7075D3Z497 112 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gm5153P01627 120 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Srsf12Q8C8K3 266 aa12.33□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Igkv4-72A0A0B4J1I4 117 aa12.32□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 CnbpP53996 178 aaKnown RBP12.31□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gpha2Q925Q5 128 aa12.31□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Itpr3P70227 2670 aa12.31□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Klk12B2RVZ0 247 aa12.31□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Nav3Q80TN7 2359 aa12.31□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gm8439G3UWA7 96 aa12.3□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 SnurfQ9WU12 71 aa12.3□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Igkv8-27A0A0G2JF28 120 aa12.3□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Igkv8-30A0A140T8M3 121 aa12.3□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Tcl1b3P56842 122 aa12.3□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 OtogO55225 2910 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 BikO70337 150 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Pkd1l2Q7TN88 2461 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Igkv4-53A0A0G2JFC6 119 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Inafm2A0A1L1STD6 152 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gm7257D3YX25 99 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Vpreb1P13372 142 aa12.29□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Gm10337F7DEP7 55 aa12.28□□□□□ -0.44
Sqstm1-201ENSMUST00000015981 Igkv8-26A0A075B5N5 123 aa12.27□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Gm11565A2A4M7 156 aa12.27□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 P01819 144 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Odf3l2Q3TZ65 277 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Serp1Q9Z1W5 66 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Hivep2Q3UHF7 2430 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Trav13-2A0A075B649 110 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Gm10320E9PW43 113 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Mrpl55Q9CZ83 127 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Igfn1Q3KNY0 2849 aa12.26□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 AcacbE9Q4Z2 2448 aa12.25□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Gm43218A0A0G2JGT0 114 aa12.24□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Ndufc1Q9CQY9 76 aa12.24□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Trbv13-2A0A140T8N6 113 aa12.24□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Sprr1bQ62267 153 aa12.24□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Cep192E9Q4Y4 2514 aaKnown RBP12.23□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Rnase1P00683 149 aa12.23□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Igkv1-110A0A0B4J1I0 119 aa12.23□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Q8R092 253 aa12.23□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Ighv2-5A0A0A6YY69 116 aa12.22□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Utp20Q5XG71 2788 aaKnown RBP12.22□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Fam19a3Q7TPG6 132 aa12.22□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Chd6A3KFM7 2711 aa12.21□□□□□ -0.45
Sqstm1-201ENSMUST00000015981 Rpl35aO55142 110 aa12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 368.9 ms