Protein–RNA interactions for Protein: A0A0A6YWX2

Ighv1-49, Immunoglobulin heavy variable 1-49 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-49A0A0A6YWX2 Gm25239-201ENSMUST00000174915 86 ntBASIC24.99■■□□□ 1.59
Ighv1-49A0A0A6YWX2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv1-49A0A0A6YWX2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-49A0A0A6YWX2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ighv1-49A0A0A6YWX2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-49A0A0A6YWX2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv1-49A0A0A6YWX2 Gm15042-201ENSMUST00000120212 883 ntBASIC22.34■■□□□ 1.17
Ighv1-49A0A0A6YWX2 Psd-208ENSMUST00000224556 2034 ntBASIC22.24■■□□□ 1.15
Ighv1-49A0A0A6YWX2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-49A0A0A6YWX2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv1-49A0A0A6YWX2 Gm15045-201ENSMUST00000117359 883 ntBASIC21.84■■□□□ 1.09
Ighv1-49A0A0A6YWX2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv1-49A0A0A6YWX2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.66■■□□□ 1.06
Ighv1-49A0A0A6YWX2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv1-49A0A0A6YWX2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-49A0A0A6YWX2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-49A0A0A6YWX2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv1-49A0A0A6YWX2 Gm24109-201ENSMUST00000175489 103 ntBASIC21.37■■□□□ 1.01
Ighv1-49A0A0A6YWX2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv1-49A0A0A6YWX2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-49A0A0A6YWX2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-49A0A0A6YWX2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-49A0A0A6YWX2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-49A0A0A6YWX2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-49A0A0A6YWX2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-49A0A0A6YWX2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Ighv1-49A0A0A6YWX2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-49A0A0A6YWX2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.02■□□□□ 0.95
Ighv1-49A0A0A6YWX2 Gm23366-201ENSMUST00000175022 89 ntBASIC20.98■□□□□ 0.95
Ighv1-49A0A0A6YWX2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-49A0A0A6YWX2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-49A0A0A6YWX2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-49A0A0A6YWX2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-49A0A0A6YWX2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.88■□□□□ 0.93
Ighv1-49A0A0A6YWX2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-49A0A0A6YWX2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv1-49A0A0A6YWX2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-49A0A0A6YWX2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-49A0A0A6YWX2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv1-49A0A0A6YWX2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-49A0A0A6YWX2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv1-49A0A0A6YWX2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv1-49A0A0A6YWX2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.55■□□□□ 0.88
Ighv1-49A0A0A6YWX2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.52■□□□□ 0.88
Ighv1-49A0A0A6YWX2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ighv1-49A0A0A6YWX2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.45■□□□□ 0.86
Ighv1-49A0A0A6YWX2 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.44■□□□□ 0.86
Ighv1-49A0A0A6YWX2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-49A0A0A6YWX2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ighv1-49A0A0A6YWX2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ighv1-49A0A0A6YWX2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ighv1-49A0A0A6YWX2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ighv1-49A0A0A6YWX2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Ighv1-49A0A0A6YWX2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv1-49A0A0A6YWX2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv1-49A0A0A6YWX2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-49A0A0A6YWX2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-49A0A0A6YWX2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.97■□□□□ 0.79
Ighv1-49A0A0A6YWX2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ighv1-49A0A0A6YWX2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-49A0A0A6YWX2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.93■□□□□ 0.78
Ighv1-49A0A0A6YWX2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-49A0A0A6YWX2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-49A0A0A6YWX2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-49A0A0A6YWX2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv1-49A0A0A6YWX2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ighv1-49A0A0A6YWX2 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.79■□□□□ 0.76
Ighv1-49A0A0A6YWX2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.78■□□□□ 0.76
Ighv1-49A0A0A6YWX2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-49A0A0A6YWX2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ighv1-49A0A0A6YWX2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-49A0A0A6YWX2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-49A0A0A6YWX2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-49A0A0A6YWX2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-49A0A0A6YWX2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ighv1-49A0A0A6YWX2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-49A0A0A6YWX2 Gm27325-201ENSMUST00000175467 74 ntBASIC19.61■□□□□ 0.73
Ighv1-49A0A0A6YWX2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ighv1-49A0A0A6YWX2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-49A0A0A6YWX2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.56■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Gm25238-201ENSMUST00000174914 89 ntBASIC19.52■□□□□ 0.72
Ighv1-49A0A0A6YWX2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-49A0A0A6YWX2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-49A0A0A6YWX2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-49A0A0A6YWX2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.44■□□□□ 0.7
Ighv1-49A0A0A6YWX2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-49A0A0A6YWX2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-49A0A0A6YWX2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv1-49A0A0A6YWX2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-49A0A0A6YWX2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-49A0A0A6YWX2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-49A0A0A6YWX2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-49A0A0A6YWX2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-49A0A0A6YWX2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms