Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Gm25239-201ENSMUST00000174915 86 ntBASIC36.01■■■■□ 3.36
Gcn1E9PVA8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Gcn1E9PVA8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Gcn1E9PVA8 Gm24109-201ENSMUST00000175489 103 ntBASIC32.02■■■□□ 2.72
Gcn1E9PVA8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gcn1E9PVA8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Gcn1E9PVA8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Gcn1E9PVA8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.18■■■□□ 2.42
Gcn1E9PVA8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Gcn1E9PVA8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.05■■■□□ 2.4
Gcn1E9PVA8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Gcn1E9PVA8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.79■■■□□ 2.36
Gcn1E9PVA8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Gcn1E9PVA8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.71■■■□□ 2.35
Gcn1E9PVA8 Gm23366-201ENSMUST00000175022 89 ntBASIC29.68■■■□□ 2.34
Gcn1E9PVA8 Gm15045-201ENSMUST00000117359 883 ntBASIC29.46■■■□□ 2.31
Gcn1E9PVA8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.06■■■□□ 2.24
Gcn1E9PVA8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Gcn1E9PVA8 Gm25238-201ENSMUST00000174914 89 ntBASIC28.87■■■□□ 2.21
Gcn1E9PVA8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.56■■■□□ 2.16
Gcn1E9PVA8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Gcn1E9PVA8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gcn1E9PVA8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Gcn1E9PVA8 Gm25262-201ENSMUST00000174934 133 ntBASIC28.25■■■□□ 2.11
Gcn1E9PVA8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Gcn1E9PVA8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
Gcn1E9PVA8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28■■■□□ 2.07
Gcn1E9PVA8 Gm26115-201ENSMUST00000175605 87 ntBASIC27.9■■■□□ 2.06
Gcn1E9PVA8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.85■■■□□ 2.05
Gcn1E9PVA8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Gcn1E9PVA8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.8■■■□□ 2.04
Gcn1E9PVA8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.69■■■□□ 2.02
Gcn1E9PVA8 Gm8109-201ENSMUST00000194076 746 ntBASIC27.63■■■□□ 2.01
Gcn1E9PVA8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.56■■■□□ 2
Gcn1E9PVA8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.52■■■□□ 2
Gcn1E9PVA8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Gcn1E9PVA8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Gcn1E9PVA8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.13■■□□□ 1.93
Gcn1E9PVA8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.03■■□□□ 1.92
Gcn1E9PVA8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.89■■□□□ 1.9
Gcn1E9PVA8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Gcn1E9PVA8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.71■■□□□ 1.87
Gcn1E9PVA8 Gm24804-201ENSMUST00000174982 85 ntBASIC26.67■■□□□ 1.86
Gcn1E9PVA8 Rab21-202ENSMUST00000218831 843 ntBASIC26.65■■□□□ 1.86
Gcn1E9PVA8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Gcn1E9PVA8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.64■■□□□ 1.86
Gcn1E9PVA8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Gcn1E9PVA8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Gcn1E9PVA8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Gcn1E9PVA8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.45■■□□□ 1.82
Gcn1E9PVA8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Gcn1E9PVA8 Zfp131-205ENSMUST00000223812 663 ntBASIC26.41■■□□□ 1.82
Gcn1E9PVA8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Gcn1E9PVA8 Gm27325-201ENSMUST00000175467 74 ntBASIC26.4■■□□□ 1.82
Gcn1E9PVA8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gcn1E9PVA8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.31■■□□□ 1.8
Gcn1E9PVA8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Gcn1E9PVA8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Gcn1E9PVA8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.25■■□□□ 1.79
Gcn1E9PVA8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Gcn1E9PVA8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Gcn1E9PVA8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.13■■□□□ 1.77
Gcn1E9PVA8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Gcn1E9PVA8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.05■■□□□ 1.76
Gcn1E9PVA8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Gcn1E9PVA8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Gcn1E9PVA8 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.01■■□□□ 1.75
Gcn1E9PVA8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Gcn1E9PVA8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.93■■□□□ 1.74
Gcn1E9PVA8 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.85■■□□□ 1.73
Gcn1E9PVA8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Gcn1E9PVA8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Gcn1E9PVA8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Gcn1E9PVA8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Gcn1E9PVA8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Gcn1E9PVA8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.69■■□□□ 1.7
Gcn1E9PVA8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.66■■□□□ 1.7
Gcn1E9PVA8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Gcn1E9PVA8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Gcn1E9PVA8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Gcn1E9PVA8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Gcn1E9PVA8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gcn1E9PVA8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Gcn1E9PVA8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Gcn1E9PVA8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.57■■□□□ 1.68
Gcn1E9PVA8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gcn1E9PVA8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Gcn1E9PVA8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Gcn1E9PVA8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.54■■□□□ 1.68
Gcn1E9PVA8 Gm27322-201ENSMUST00000184007 104 ntBASIC25.51■■□□□ 1.67
Gcn1E9PVA8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Gcn1E9PVA8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Gcn1E9PVA8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.45■■□□□ 1.67
Gcn1E9PVA8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Gcn1E9PVA8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.42■■□□□ 1.66
Gcn1E9PVA8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Gcn1E9PVA8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gcn1E9PVA8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gcn1E9PVA8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.37■■□□□ 1.65
Gcn1E9PVA8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms