Protein–RNA interactions for Protein: F7CCV5

Gm3443, Predicted gene 3443, mousemouse

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3443F7CCV5 Gm25239-201ENSMUST00000174915 86 ntBASIC28.3■■■□□ 2.12
Gm3443F7CCV5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Gm3443F7CCV5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm3443F7CCV5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Gm3443F7CCV5 Gm15042-201ENSMUST00000120212 883 ntBASIC24.92■■□□□ 1.58
Gm3443F7CCV5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Gm3443F7CCV5 Gm24109-201ENSMUST00000175489 103 ntBASIC24.45■■□□□ 1.5
Gm3443F7CCV5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Gm3443F7CCV5 Gm15045-201ENSMUST00000117359 883 ntBASIC24.4■■□□□ 1.5
Gm3443F7CCV5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm3443F7CCV5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm3443F7CCV5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3443F7CCV5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Gm3443F7CCV5 Gm23366-201ENSMUST00000175022 89 ntBASIC23.66■■□□□ 1.38
Gm3443F7CCV5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Gm3443F7CCV5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.45■■□□□ 1.34
Gm3443F7CCV5 Psd-208ENSMUST00000224556 2034 ntBASIC23.32■■□□□ 1.32
Gm3443F7CCV5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm3443F7CCV5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm3443F7CCV5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm3443F7CCV5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm3443F7CCV5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Gm3443F7CCV5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm3443F7CCV5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Gm3443F7CCV5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Gm3443F7CCV5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm3443F7CCV5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.91■■□□□ 1.26
Gm3443F7CCV5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm3443F7CCV5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.85■■□□□ 1.25
Gm3443F7CCV5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm3443F7CCV5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.62■■□□□ 1.21
Gm3443F7CCV5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Gm3443F7CCV5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.57■■□□□ 1.2
Gm3443F7CCV5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Gm3443F7CCV5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3443F7CCV5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm3443F7CCV5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3443F7CCV5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3443F7CCV5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm3443F7CCV5 Gm25238-201ENSMUST00000174914 89 ntBASIC22.27■■□□□ 1.16
Gm3443F7CCV5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.24■■□□□ 1.15
Gm3443F7CCV5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.16■■□□□ 1.14
Gm3443F7CCV5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3443F7CCV5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3443F7CCV5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm3443F7CCV5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3443F7CCV5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3443F7CCV5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3443F7CCV5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm3443F7CCV5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Gm3443F7CCV5 Gm27325-201ENSMUST00000175467 74 ntBASIC21.88■■□□□ 1.09
Gm3443F7CCV5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Gm3443F7CCV5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.86■■□□□ 1.09
Gm3443F7CCV5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3443F7CCV5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3443F7CCV5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3443F7CCV5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3443F7CCV5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3443F7CCV5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.69■■□□□ 1.06
Gm3443F7CCV5 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.69■■□□□ 1.06
Gm3443F7CCV5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3443F7CCV5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.63■■□□□ 1.05
Gm3443F7CCV5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm3443F7CCV5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Gm3443F7CCV5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gm3443F7CCV5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm3443F7CCV5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm3443F7CCV5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm3443F7CCV5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm3443F7CCV5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Gm3443F7CCV5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Gm3443F7CCV5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm3443F7CCV5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm3443F7CCV5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.39■■□□□ 1.01
Gm3443F7CCV5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm3443F7CCV5 Rab21-202ENSMUST00000218831 843 ntBASIC21.36■■□□□ 1.01
Gm3443F7CCV5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3443F7CCV5 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.33■■□□□ 1.01
Gm3443F7CCV5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.31■■□□□ 1
Gm3443F7CCV5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3443F7CCV5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3443F7CCV5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm3443F7CCV5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3443F7CCV5 Gm25262-201ENSMUST00000174934 133 ntBASIC21.24■□□□□ 0.99
Gm3443F7CCV5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3443F7CCV5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3443F7CCV5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm3443F7CCV5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3443F7CCV5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm3443F7CCV5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3443F7CCV5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.06■□□□□ 0.96
Gm3443F7CCV5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Gm3443F7CCV5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3443F7CCV5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3443F7CCV5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3443F7CCV5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3443F7CCV5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3443F7CCV5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3443F7CCV5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3443F7CCV5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms