Protein–RNA interactions for Protein: Q8K2Q5

Chchd7, Coiled-coil-helix-coiled-coil-helix domain-containing protein 7, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd7Q8K2Q5 Gm25239-201ENSMUST00000174915 86 ntBASIC26.1■■□□□ 1.77
Chchd7Q8K2Q5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Chchd7Q8K2Q5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chchd7Q8K2Q5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chchd7Q8K2Q5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chchd7Q8K2Q5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Chchd7Q8K2Q5 Gm15042-201ENSMUST00000120212 883 ntBASIC23.27■■□□□ 1.32
Chchd7Q8K2Q5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chchd7Q8K2Q5 Gm15045-201ENSMUST00000117359 883 ntBASIC22.78■■□□□ 1.24
Chchd7Q8K2Q5 Psd-208ENSMUST00000224556 2034 ntBASIC22.7■■□□□ 1.23
Chchd7Q8K2Q5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chchd7Q8K2Q5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Chchd7Q8K2Q5 Gm24109-201ENSMUST00000175489 103 ntBASIC22.4■■□□□ 1.18
Chchd7Q8K2Q5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chchd7Q8K2Q5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.37■■□□□ 1.17
Chchd7Q8K2Q5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chchd7Q8K2Q5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chchd7Q8K2Q5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chchd7Q8K2Q5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chchd7Q8K2Q5 Gm23366-201ENSMUST00000175022 89 ntBASIC21.92■■□□□ 1.1
Chchd7Q8K2Q5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chchd7Q8K2Q5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chchd7Q8K2Q5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chchd7Q8K2Q5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chchd7Q8K2Q5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.82■■□□□ 1.08
Chchd7Q8K2Q5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chchd7Q8K2Q5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chchd7Q8K2Q5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chchd7Q8K2Q5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chchd7Q8K2Q5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chchd7Q8K2Q5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.59■■□□□ 1.05
Chchd7Q8K2Q5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chchd7Q8K2Q5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chchd7Q8K2Q5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chchd7Q8K2Q5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Chchd7Q8K2Q5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chchd7Q8K2Q5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.31■■□□□ 1
Chchd7Q8K2Q5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chchd7Q8K2Q5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.27■■□□□ 1
Chchd7Q8K2Q5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chchd7Q8K2Q5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chchd7Q8K2Q5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chchd7Q8K2Q5 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.01■□□□□ 0.95
Chchd7Q8K2Q5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chchd7Q8K2Q5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.95■□□□□ 0.94
Chchd7Q8K2Q5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chchd7Q8K2Q5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chchd7Q8K2Q5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chchd7Q8K2Q5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chchd7Q8K2Q5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chchd7Q8K2Q5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chchd7Q8K2Q5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chchd7Q8K2Q5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.65■□□□□ 0.9
Chchd7Q8K2Q5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chchd7Q8K2Q5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chchd7Q8K2Q5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chchd7Q8K2Q5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Chchd7Q8K2Q5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chchd7Q8K2Q5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.53■□□□□ 0.88
Chchd7Q8K2Q5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chchd7Q8K2Q5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chchd7Q8K2Q5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Chchd7Q8K2Q5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chchd7Q8K2Q5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.47■□□□□ 0.87
Chchd7Q8K2Q5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Chchd7Q8K2Q5 Gm27325-201ENSMUST00000175467 74 ntBASIC20.46■□□□□ 0.87
Chchd7Q8K2Q5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.43■□□□□ 0.86
Chchd7Q8K2Q5 Gm25238-201ENSMUST00000174914 89 ntBASIC20.42■□□□□ 0.86
Chchd7Q8K2Q5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd7Q8K2Q5 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.39■□□□□ 0.85
Chchd7Q8K2Q5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chchd7Q8K2Q5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.3■□□□□ 0.84
Chchd7Q8K2Q5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chchd7Q8K2Q5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chchd7Q8K2Q5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Chchd7Q8K2Q5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chchd7Q8K2Q5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chchd7Q8K2Q5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chchd7Q8K2Q5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.1■□□□□ 0.81
Chchd7Q8K2Q5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chchd7Q8K2Q5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chchd7Q8K2Q5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Chchd7Q8K2Q5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.02■□□□□ 0.8
Chchd7Q8K2Q5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chchd7Q8K2Q5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.02■□□□□ 0.8
Chchd7Q8K2Q5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.01■□□□□ 0.79
Chchd7Q8K2Q5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chchd7Q8K2Q5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chchd7Q8K2Q5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chchd7Q8K2Q5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chchd7Q8K2Q5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chchd7Q8K2Q5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chchd7Q8K2Q5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chchd7Q8K2Q5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chchd7Q8K2Q5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chchd7Q8K2Q5 Rab21-202ENSMUST00000218831 843 ntBASIC19.84■□□□□ 0.77
Chchd7Q8K2Q5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chchd7Q8K2Q5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chchd7Q8K2Q5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chchd7Q8K2Q5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms